RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 MBD3L2Q8NHZ7 208 aaPredicted RBP6.19□□□□□ -1.42
HDAC3-216ENST00000523088 FAM57AQ8TBR7 257 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 SCGB1C1Q8TD33 95 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 C9orf85Q96MD7 179 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 AQP10Q96PS8 301 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 FAM173AQ9BQD7 235 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 POLR2J2Q9GZM3 115 aaKnown RBP6.19□□□□□ -1.42
HDAC3-216ENST00000523088 EIF5A2Q9GZV4 153 aaKnown RBP6.19□□□□□ -1.42
HDAC3-216ENST00000523088 RNASE7Q9H1E1 156 aaKnown RBP6.19□□□□□ -1.42
HDAC3-216ENST00000523088 FBXL15Q9H469 300 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 C1RLQ9NZP8 487 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 SPCS1Q9Y6A9 102 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 CELSR2Q9HCU4 2923 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 ARHGAP21Q5T5U3 1957 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 EXPH5Q8NEV8 1989 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 INTS1Q8N201 2190 aaKnown RBP6.18□□□□□ -1.42
HDAC3-216ENST00000523088 ZC3H12DA2A288 527 aaKnown RBP6.18□□□□□ -1.42
HDAC3-216ENST00000523088 MEGF11A6BM72 1044 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 CYSRT1A8MQ03 144 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 C4orf51C9J302 202 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 PRSS46E5RG02 174 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 SH2D1BO14796 132 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 ANGPTL7O43827 346 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 PITX3O75364 302 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 JTBO76095 146 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 IGHG1P01857 330 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 HLA-DQA2P01906 255 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 MT-ATP8P03928 68 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 ATP5G1P05496 136 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 H1F0P07305 194 aaKnown RBP6.18□□□□□ -1.42
HDAC3-216ENST00000523088 CD3EP07766 207 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 ATP5G3P48201 142 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 SLC25A1P53007 311 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 RPL15P61313 204 aaKnown RBP6.18□□□□□ -1.42
HDAC3-216ENST00000523088 SNRPGP62308 76 aaKnown RBP6.18□□□□□ -1.42
HDAC3-216ENST00000523088 PLGLB1Q02325 96 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 ATP5G2Q06055 141 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 OR7A5Q15622 319 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 MSMO1Q15800 293 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 KIAA1644Q3SXP7 199 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 MPV17L2Q567V2 206 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 TECRLQ5HYJ1 363 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 SP5Q6BEB4 398 aaPredicted RBP6.18□□□□□ -1.42
HDAC3-216ENST00000523088 FAM166AQ6J272 317 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 ZNF322Q6U7Q0 402 aaPredicted RBP6.18□□□□□ -1.42
HDAC3-216ENST00000523088 CMC1Q7Z7K0 106 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 GATAD1Q8WUU5 269 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 DDB2Q92466 427 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 RHNO1Q9BSD3 238 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 C1QTNF5Q9BXJ0 243 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 AICDAQ9GZX7 198 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 JPT2Q9H910 190 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 DNAJB12Q9NXW2 375 aaKnown RBP6.18□□□□□ -1.42
HDAC3-216ENST00000523088 LAMTOR3Q9UHA4 124 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 ABCA12Q86UK0 2595 aa6.18□□□□□ -1.42
HDAC3-216ENST00000523088 HCFC1P51610 2035 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 TMED7-TICAM2A0A0A6YYA0 188 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 OR4C45A6NMZ5 311 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 ZNF727A8MUV8 499 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 OVOL1O14753 267 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 RAMP1O60894 148 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 DPM2O94777 84 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 CA1P00915 261 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-216ENST00000523088 MRPL3P09001 348 aaKnown RBP6.17□□□□□ -1.42
HDAC3-216ENST00000523088 PTHLHP12272 177 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 MYOD1P15172 320 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 OPRK1P41145 380 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 APOBEC1P41238 236 aaKnown RBP6.17□□□□□ -1.42
HDAC3-216ENST00000523088 SSBP1Q04837 148 aaKnown RBP6.17□□□□□ -1.42
HDAC3-216ENST00000523088 ENTPD8Q5MY95 495 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 FRG2Q64ET8 278 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 ZNF793Q6ZN11 406 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 SEM1Q6ZVN7 128 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 SSX8Q7RTT4 187 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 WDR31Q8NA23 367 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 OR5H2Q8NGV7 314 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 TMEM37Q8WXS4 190 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 NPIPB3Q92617 1050 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 RND1Q92730 232 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 FRG2BQ96QU4 278 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 VGLL1Q99990 258 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 PDCD1LG2Q9BQ51 273 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 HES7Q9BYE0 225 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 COMMD5Q9GZQ3 224 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 C5orf66Q9H5L9 145 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 FIS1Q9Y3D6 152 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 NINQ8N4C6 2090 aa6.17□□□□□ -1.42
HDAC3-216ENST00000523088 LOC107984640A0A0U1RRK4 108 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 A0A1B0GTH9 108 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 DPRXA6NFQ7 191 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 EEF1E1-BLOC1S5C9J1V9 151 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 LDB3O75112 727 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 CXorf1O96002 111 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 NAPSAO96009 420 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 IGHMP01871 453 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 HBE1P02100 147 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 IGKV3-11P04433 115 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 IGF1P05019 195 aa6.16□□□□□ -1.42
HDAC3-216ENST00000523088 SRP19P09132 144 aaKnown RBP6.16□□□□□ -1.42
HDAC3-216ENST00000523088 VDAC2P45880 294 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms