RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 IDO2Q6ZQW0 420 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 ZNF818PQ6ZRF7 136 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 PDPNQ86YL7 162 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 CMTM1Q8IZ96 169 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 Q8N2B8 174 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 Q8N9W7 124 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 CCDC71LQ8N9Z2 235 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 NPBQ8NG41 125 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 OR13C8Q8NGS7 320 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 MARCH1Q8TCQ1 289 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 CD300LFQ8TDQ1 290 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 MRGPRFQ96AM1 343 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 FLYWCH2Q96CP2 140 aaKnown RBP2.41□□□□□ -2.02
VPS13B-209ENST00000521559 TSNAXQ99598 290 aaKnown RBP2.41□□□□□ -2.02
VPS13B-209ENST00000521559 SLC25A21Q9BQT8 299 aaPredicted RBP2.41□□□□□ -2.02
VPS13B-209ENST00000521559 RTBDNQ9BSG5 229 aaPredicted RBP2.41□□□□□ -2.02
VPS13B-209ENST00000521559 FXYD6Q9H0Q3 95 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 RANBP3Q9H6Z4 567 aaPredicted RBP2.41□□□□□ -2.02
VPS13B-209ENST00000521559 RAB18Q9NP72 206 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 PLSCR3Q9NRY6 295 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 SLC35D1Q9NTN3 355 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 MCUBQ9NWR8 336 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 THYN1Q9P016 225 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 PRELID3BQ9Y3B1 194 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 WASHC3Q9Y3C0 194 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 MED13LQ71F56 2210 aa2.41□□□□□ -2.02
VPS13B-209ENST00000521559 CHD3Q12873 2000 aaKnown RBP2.41□□□□□ -2.02
VPS13B-209ENST00000521559 MYO9AB2RTY4 2548 aa2.4□□□□□ -2.02
VPS13B-209ENST00000521559 UTP20O75691 2785 aaKnown RBP2.4□□□□□ -2.02
VPS13B-209ENST00000521559 CSPG4Q6UVK1 2322 aa2.4□□□□□ -2.02
VPS13B-209ENST00000521559 CELSR2Q9HCU4 2923 aa2.4□□□□□ -2.02
VPS13B-209ENST00000521559 C3orf85A0A1B0GTC6 90 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 TMEM89A2RUT3 159 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 NCBP2LA6PVI3 153 aaKnown RBP2.4□□□□□ -2.03
VPS13B-209ENST00000521559 NBR2O15453 112 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 FGF16O43320 207 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 LYRM1O43325 122 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 B3GALNT1O75752 331 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 NDUFB6O95139 128 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 CRYZL1O95825 349 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 HPRT1P00492 218 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 HRASP01112 189 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 IGLV2-23P01705 113 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 IGKV1-16P04430 117 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 CRYGBP07316 175 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 F2RP25116 425 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 BTCP35070 178 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 LPAR6P43657 344 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 CCR6P51684 374 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 PIGPP57054 158 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 UBE2KP61086 200 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 SSTP61278 116 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 BLCAPP62952 87 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 IFITM3Q01628 133 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 CATR1Q13166 79 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 ASAH1Q13510 395 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 PSG5Q15238 335 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 MMDQ15546 238 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 POU2AF1Q16633 256 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 C5orf64Q2M2E5 130 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 KRTAP13-3Q3SY46 172 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 VMA21Q3ZAQ7 101 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 OR2B11Q5JQS5 317 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 SGPP2Q8IWX5 399 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 TCTEX1D1Q8N7M0 179 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 C5orf56Q8N8D9 126 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 OR4C13Q8NGP0 309 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 OR1B1Q8NGR6 318 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 OR4F5Q8NH21 305 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 OR51H1Q8NH63 302 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 OR4S2Q8NH73 311 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 TCTEX1D2Q8WW35 142 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 TMEM158Q8WZ71 300 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 RBMXL1Q96E39 390 aaKnown RBP2.4□□□□□ -2.03
VPS13B-209ENST00000521559 MRPL53Q96EL3 112 aaKnown RBP2.4□□□□□ -2.03
VPS13B-209ENST00000521559 TSC22D3Q99576 134 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 SPAG8Q99932 426 aaPredicted RBP2.4□□□□□ -2.03
VPS13B-209ENST00000521559 RASL11BQ9BPW5 248 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 C16orf95Q9H693 158 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 ZNF702PQ9H963 129 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 SLC2A9Q9NRM0 540 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 COPZ2Q9P299 210 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 METTL1Q9UBP6 276 aaKnown RBP2.4□□□□□ -2.03
VPS13B-209ENST00000521559 TBC1D24Q9ULP9 559 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 C14orf166Q9Y224 244 aaKnown RBP2.4□□□□□ -2.03
VPS13B-209ENST00000521559 VSIG4Q9Y279 399 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 KCNIP3Q9Y2W7 256 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 HRNRQ86YZ3 2850 aaPredicted RBP2.4□□□□□ -2.03
VPS13B-209ENST00000521559 HIVEP2P31629 2446 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 ITPR2Q14571 2701 aa2.4□□□□□ -2.03
VPS13B-209ENST00000521559 ABCA1O95477 2261 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 CR1P17927 2039 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 IGHV7-81A0A0B4J1V7 117 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 PIGBOS1A0A0B4J2F0 54 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 A0A1B0GUS0 222 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 FAM240BA0A1B0GVZ2 78 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 CLPSL1A2RUU4 121 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 CRYM-AS1A6NIL9 109 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 H0Y980 276 aa2.39□□□□□ -2.03
VPS13B-209ENST00000521559 UPK2O00526 184 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms