RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 KCNIP3Q9Y2W7 256 aa12.7□□□□□ -0.38
SQLE-205ENST00000521232 TMEM187Q14656 261 aa12.69□□□□□ -0.38
SQLE-205ENST00000521232 TMEM268Q5VZI3 342 aa12.69□□□□□ -0.38
SQLE-205ENST00000521232 TOMM20LQ6UXN7 152 aa12.69□□□□□ -0.38
SQLE-205ENST00000521232 IL22RA2Q969J5 263 aa12.69□□□□□ -0.38
SQLE-205ENST00000521232 RNF2Q99496 336 aa12.69□□□□□ -0.38
SQLE-205ENST00000521232 FAM110AQ9BQ89 295 aa12.69□□□□□ -0.38
SQLE-205ENST00000521232 FNDC4Q9H6D8 234 aaPredicted RBP12.69□□□□□ -0.38
SQLE-205ENST00000521232 RYR2Q92736 4967 aa12.69□□□□□ -0.38
SQLE-205ENST00000521232 OR4C46A6NHA9 309 aa12.68□□□□□ -0.38
SQLE-205ENST00000521232 HTR2BP41595 481 aa12.68□□□□□ -0.38
SQLE-205ENST00000521232 MLANAQ16655 118 aa12.68□□□□□ -0.38
SQLE-205ENST00000521232 FAM90A2PQ658T7 463 aa12.68□□□□□ -0.38
SQLE-205ENST00000521232 MCUBQ9NWR8 336 aa12.68□□□□□ -0.38
SQLE-205ENST00000521232 CACNG5Q9UF02 275 aa12.68□□□□□ -0.38
SQLE-205ENST00000521232 UBQLN2Q9UHD9 624 aa12.68□□□□□ -0.38
SQLE-205ENST00000521232 CLN5O75503 358 aa12.67□□□□□ -0.38
SQLE-205ENST00000521232 KLF9Q13886 244 aaPredicted RBP12.67□□□□□ -0.38
SQLE-205ENST00000521232 ODF3L2Q3SX64 289 aa12.67□□□□□ -0.38
SQLE-205ENST00000521232 ZFAND6Q6FIF0 208 aa12.67□□□□□ -0.38
SQLE-205ENST00000521232 ZNF600Q6ZNG1 722 aa12.67□□□□□ -0.38
SQLE-205ENST00000521232 OR4X1Q8NH49 305 aa12.67□□□□□ -0.38
SQLE-205ENST00000521232 GINS3Q9BRX5 216 aa12.67□□□□□ -0.38
SQLE-205ENST00000521232 MRPL36Q9P0J6 103 aaKnown RBP12.67□□□□□ -0.38
SQLE-205ENST00000521232 CACFD1Q9UGQ2 172 aa12.67□□□□□ -0.38
SQLE-205ENST00000521232 IGHV3-49A0A0A0MS15 119 aa12.66□□□□□ -0.38
SQLE-205ENST00000521232 CCDC160A6NGH7 325 aa12.66□□□□□ -0.38
SQLE-205ENST00000521232 OPRK1P41145 380 aa12.66□□□□□ -0.38
SQLE-205ENST00000521232 SUPT4H1P63272 117 aaKnown RBP12.66□□□□□ -0.38
SQLE-205ENST00000521232 C2orf83Q53S99 150 aa12.66□□□□□ -0.38
SQLE-205ENST00000521232 TRIM63Q969Q1 353 aa12.66□□□□□ -0.38
SQLE-205ENST00000521232 RBM38Q9H0Z9 239 aaKnown RBP12.66□□□□□ -0.38
SQLE-205ENST00000521232 VSIRQ9H7M9 311 aa12.66□□□□□ -0.38
SQLE-205ENST00000521232 ZFAND3Q9H8U3 227 aa12.66□□□□□ -0.38
SQLE-205ENST00000521232 HEYLQ9NQ87 328 aaPredicted RBP12.66□□□□□ -0.38
SQLE-205ENST00000521232 PUS1Q9Y606 427 aaKnown RBP eCLIP12.66□□□□□ -0.38
SQLE-205ENST00000521232 V9GYH0 126 aa12.66□□□□□ -0.38
SQLE-205ENST00000521232 A0A1B0GU03 582 aa12.65□□□□□ -0.38
SQLE-205ENST00000521232 CD5P06127 495 aa12.65□□□□□ -0.38
SQLE-205ENST00000521232 AKR1C4P17516 323 aa12.65□□□□□ -0.38
SQLE-205ENST00000521232 FAUP35544 74 aaKnown RBP12.65□□□□□ -0.38
SQLE-205ENST00000521232 CMC4P56277 68 aaPredicted RBP12.65□□□□□ -0.38
SQLE-205ENST00000521232 PYDC2Q56P42 97 aa12.65□□□□□ -0.38
SQLE-205ENST00000521232 NMSQ5H8A3 153 aa12.65□□□□□ -0.38
SQLE-205ENST00000521232 OVOL2Q9BRP0 275 aa12.65□□□□□ -0.38
SQLE-205ENST00000521232 PRR13Q9NZ81 148 aa12.65□□□□□ -0.38
SQLE-205ENST00000521232 DNAH1Q9P2D7 4330 aa12.65□□□□□ -0.38
SQLE-205ENST00000521232 PLECQ15149 4684 aaKnown RBP12.64□□□□□ -0.39
SQLE-205ENST00000521232 IGHV3OR16-13A0A075B7E8 117 aa12.64□□□□□ -0.39
SQLE-205ENST00000521232 IGHV3-74A0A0B4J1X5 117 aa12.64□□□□□ -0.39
SQLE-205ENST00000521232 A0A0B4J2A0 478 aa12.64□□□□□ -0.39
SQLE-205ENST00000521232 APOHP02749 345 aaPredicted RBP12.64□□□□□ -0.39
SQLE-205ENST00000521232 SULT1A3P0DMM9 295 aa12.64□□□□□ -0.39
SQLE-205ENST00000521232 SULT1A4P0DMN0 295 aa12.64□□□□□ -0.39
SQLE-205ENST00000521232 S100A5P33763 92 aa12.64□□□□□ -0.39
SQLE-205ENST00000521232 BMI1P35226 326 aa12.64□□□□□ -0.39
SQLE-205ENST00000521232 AP3S2P59780 193 aa12.64□□□□□ -0.39
SQLE-205ENST00000521232 ZNF79Q15937 498 aa12.64□□□□□ -0.39
SQLE-205ENST00000521232 CCDC190Q86UF4 302 aa12.64□□□□□ -0.39
SQLE-205ENST00000521232 LILRB2Q8N423 598 aa12.64□□□□□ -0.39
SQLE-205ENST00000521232 TOMM5Q8N4H5 51 aa12.64□□□□□ -0.39
SQLE-205ENST00000521232 IL17DQ8TAD2 202 aa12.64□□□□□ -0.39
SQLE-205ENST00000521232 RNASEH2CQ8TDP1 164 aaKnown RBP12.64□□□□□ -0.39
SQLE-205ENST00000521232 DEDD2Q8WXF8 326 aa12.64□□□□□ -0.39
SQLE-205ENST00000521232 SHPKQ9UHJ6 478 aa12.64□□□□□ -0.39
SQLE-205ENST00000521232 TRAV30A0A087WSZ9 112 aa12.63□□□□□ -0.39
SQLE-205ENST00000521232 KIR2DL5BA0A0G2JN68 375 aa12.63□□□□□ -0.39
SQLE-205ENST00000521232 KIR2DL5BA0A0G2JPC4 375 aa12.63□□□□□ -0.39
SQLE-205ENST00000521232 RPS10-NUDT3A0A1W2PQS6 291 aa12.63□□□□□ -0.39
SQLE-205ENST00000521232 CEBPZOSA8MTT3 80 aa12.63□□□□□ -0.39
SQLE-205ENST00000521232 ZNF701M0R085 212 aaPredicted RBP12.63□□□□□ -0.39
SQLE-205ENST00000521232 UBE2CO00762 179 aa12.63□□□□□ -0.39
SQLE-205ENST00000521232 ANXA3P12429 323 aa12.63□□□□□ -0.39
SQLE-205ENST00000521232 CCR6P51684 374 aa12.63□□□□□ -0.39
SQLE-205ENST00000521232 APOC4P55056 127 aa12.63□□□□□ -0.39
SQLE-205ENST00000521232 Q6ZWC4 215 aa12.63□□□□□ -0.39
SQLE-205ENST00000521232 LYZL2Q7Z4W2 148 aa12.63□□□□□ -0.39
SQLE-205ENST00000521232 KIR2DL5AQ8N109 375 aa12.63□□□□□ -0.39
SQLE-205ENST00000521232 SLC24A4Q8NFF2 622 aa12.63□□□□□ -0.39
SQLE-205ENST00000521232 KIR2DL5BQ8NHK3 375 aa12.63□□□□□ -0.39
SQLE-205ENST00000521232 TMEM170AQ8WVE7 144 aa12.63□□□□□ -0.39
SQLE-205ENST00000521232 ST8SIA2Q92186 375 aa12.63□□□□□ -0.39
SQLE-205ENST00000521232 SCGB2A1O75556 95 aa12.62□□□□□ -0.39
SQLE-205ENST00000521232 IGKV1-17P01599 117 aa12.62□□□□□ -0.39
SQLE-205ENST00000521232 NPPCP23582 126 aa12.62□□□□□ -0.39
SQLE-205ENST00000521232 PAFAH1B2P68402 229 aa12.62□□□□□ -0.39
SQLE-205ENST00000521232 SRPXP78539 464 aa12.62□□□□□ -0.39
SQLE-205ENST00000521232 SMCO1Q147U7 214 aa12.62□□□□□ -0.39
SQLE-205ENST00000521232 PRSS54Q6PEW0 395 aa12.62□□□□□ -0.39
SQLE-205ENST00000521232 TCF24Q7RTU0 167 aa12.62□□□□□ -0.39
SQLE-205ENST00000521232 WFDC3Q8IUB2 231 aa12.62□□□□□ -0.39
SQLE-205ENST00000521232 LGI3Q8N145 548 aa12.62□□□□□ -0.39
SQLE-205ENST00000521232 HSPB7Q9UBY9 170 aa12.62□□□□□ -0.39
SQLE-205ENST00000521232 TP53TG1Q9Y2A0 90 aa12.62□□□□□ -0.39
SQLE-205ENST00000521232 IGKV3-7A0A075B6H7 116 aa12.61□□□□□ -0.39
SQLE-205ENST00000521232 PIGBOS1A0A0B4J2F0 54 aa12.61□□□□□ -0.39
SQLE-205ENST00000521232 DFFBO76075 338 aa12.61□□□□□ -0.39
SQLE-205ENST00000521232 SLC25A4P12235 298 aa12.61□□□□□ -0.39
SQLE-205ENST00000521232 CRYBB3P26998 211 aa12.61□□□□□ -0.39
SQLE-205ENST00000521232 TFPI2P48307 235 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms