RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 MED28Q9H204 178 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 C11orf68Q9H3H3 251 aaKnown RBP3.64□□□□□ -1.83
SDCBP-207ENST00000520168 ZNF355PQ9NSJ1 428 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 GHRLQ9UBU3 117 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 MTFP1Q9UDX5 166 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 UBR4Q5T4S7 5183 aa3.64□□□□□ -1.83
SDCBP-207ENST00000520168 TRAV18A0A075B6X5 111 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 IGKV1-9A0A0C4DH69 117 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 IGKV1-12A0A0C4DH73 117 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 TMEM272A0A1B0GTI8 110 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 A0A1B0GV90 55 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 C7orf66A4D0T2 115 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 OR5H14A6NHG9 310 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 SNRPGP15A8MWD9 76 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 RRHO14718 337 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 IGKV1D-12P01611 117 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 SLPIP03973 132 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 IL5P05113 134 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 CRYGBP07316 175 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 NBEAP1P0C6P0 100 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 UBBP0CG47 229 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 GNRHRP30968 328 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 FCGR2BP31994 310 aaPredicted RBP3.63□□□□□ -1.83
SDCBP-207ENST00000520168 LGALS7P47929 136 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 CLDN12P56749 244 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 SEC61GP60059 68 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 NUTF2P61970 127 aaKnown RBP3.63□□□□□ -1.83
SDCBP-207ENST00000520168 RRAS2P62070 204 aaPredicted RBP3.63□□□□□ -1.83
SDCBP-207ENST00000520168 RBX1P62877 108 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 CD300CQ08708 224 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 ODF4Q2M2E3 257 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 DEFB135Q30KP9 77 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 DEFB114Q30KQ6 69 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 CDNFQ49AH0 187 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 LY6G6FQ5SQ64 297 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 ATAD3CQ5T2N8 411 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 GLDNQ6ZMI3 551 aaPredicted RBP3.63□□□□□ -1.83
SDCBP-207ENST00000520168 ACOT7LQ6ZUV0 252 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 NOXA1Q86UR1 476 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 PUSL1Q8N0Z8 303 aaKnown RBP3.63□□□□□ -1.83
SDCBP-207ENST00000520168 STPG3Q8N7X2 389 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 TMEM229BQ8NBD8 167 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 STXBP6Q8NFX7 210 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 OR4K15Q8NH41 348 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 C11orf45Q8TAV5 145 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 ORAI1Q96D31 301 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 SULT4A1Q9BR01 284 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 ABHD14AQ9BUJ0 271 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 DPCDQ9BVM2 203 aaPredicted RBP3.63□□□□□ -1.83
SDCBP-207ENST00000520168 ATG5Q9H1Y0 275 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 MCUBQ9NWR8 336 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 TAS2R4Q9NYW5 299 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 GNG12Q9UBI6 72 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 SMPXQ9UHP9 88 aa3.63□□□□□ -1.83
SDCBP-207ENST00000520168 APOBP04114 4563 aaKnown RBP3.63□□□□□ -1.83
SDCBP-207ENST00000520168 LRP1BQ9NZR2 4599 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 IGHV3-43A0A0B4J1X8 118 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 H7C2Y5 167 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 LGALS9O00182 355 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 RAB27BO00194 218 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 RTL8CO15255 209 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 ARPC5O15511 151 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 PAGE4O60829 102 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 GGCTO75223 188 aaKnown RBP3.62□□□□□ -1.83
SDCBP-207ENST00000520168 C1QBP02746 253 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 MT-ND4P03905 459 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 AKAIN1P0CW23 69 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 P0DMU3 169 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 FAM231AP0DMU4 169 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 FAM231CP0DMU5 169 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 IGHV3-43DP0DP04 118 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 TMEM225BP0DP42 221 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 EGR2P11161 476 aaPredicted RBP3.62□□□□□ -1.83
SDCBP-207ENST00000520168 ANXA3P12429 323 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 C4BPBP20851 252 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 BTCP35070 178 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 RPL35P42766 123 aaKnown RBP3.62□□□□□ -1.83
SDCBP-207ENST00000520168 NPBWR1P48145 328 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 ZNF134P52741 427 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 MFAP2P55001 183 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 QRFPP83859 136 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 MEF2DQ14814 521 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 KISS1Q15726 138 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 LGALS9BQ3B8N2 356 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 CT45A1Q5HYN5 189 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 GCSAMLQ5JQS6 135 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 NHLRC3Q5JS37 347 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 PVRIGQ6DKI7 326 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 TMEM182Q6ZP80 229 aaPredicted RBP3.62□□□□□ -1.83
SDCBP-207ENST00000520168 ZNF833PQ6ZTB9 187 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 JAGN1Q8N5M9 183 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 SUMF2Q8NBJ7 301 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 OR10W1Q8NGF6 305 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 OR5AN1Q8NGI8 311 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 CT45A3Q8NHU0 189 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 OCC1Q8TAD7 63 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 PLPPR1Q8TBJ4 325 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 FAM46BQ96A09 425 aa3.62□□□□□ -1.83
SDCBP-207ENST00000520168 ADAT3Q96EY9 351 aaPredicted RBP3.62□□□□□ -1.83
SDCBP-207ENST00000520168 SFRP2Q96HF1 295 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms