RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 GUCA2BQ16661 112 aa7.1□□□□□ -1.27
HDAC3-215ENST00000519474 RPEL1Q2QD12 228 aa7.1□□□□□ -1.27
HDAC3-215ENST00000519474 C15orf32Q32M92 178 aa7.1□□□□□ -1.27
HDAC3-215ENST00000519474 SMIM12Q96EX1 92 aa7.1□□□□□ -1.27
HDAC3-215ENST00000519474 ST6GAL2Q96JF0 529 aa7.1□□□□□ -1.27
HDAC3-215ENST00000519474 NXF2Q9GZY0 626 aaKnown RBP7.1□□□□□ -1.27
HDAC3-215ENST00000519474 FXYD6Q9H0Q3 95 aa7.1□□□□□ -1.27
HDAC3-215ENST00000519474 HIPK2Q9H2X6 1198 aa7.1□□□□□ -1.27
HDAC3-215ENST00000519474 S4R3C0 116 aa7.1□□□□□ -1.27
HDAC3-215ENST00000519474 IGLV11-55A0A075B6I3 123 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 A0A1B0GV72 72 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 IZUMO1RA6ND01 250 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 HELTA6NFD8 242 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 ZNF785A8K8V0 405 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 PPP5D1E7EU14 171 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 M0QYG6 137 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 IGHV3-23P01764 117 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 HLA-AP01891 365 aaKnown RBP7.09□□□□□ -1.27
HDAC3-215ENST00000519474 RLN2P04090 185 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 RLN1P04808 185 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 FGF2P09038 288 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 FOLR2P14207 255 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 G6PCP35575 357 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 PHLDA2Q53GA4 152 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 CLEC19AQ6UXS0 136 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 COMMD7Q86VX2 200 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 GPHB5Q86YW7 130 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 CMTM1Q8IZ96 169 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 MTURNQ8N3F0 131 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 CCDC71LQ8N9Z2 235 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 OR52I2Q8NH67 350 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 DEDD2Q8WXF8 326 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 NARS2Q96I59 477 aaKnown RBP7.09□□□□□ -1.27
HDAC3-215ENST00000519474 CCDC140Q96MF4 163 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 WWC2-AS2Q96NR7 200 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 C7orf50Q9BRJ6 194 aaKnown RBP7.09□□□□□ -1.27
HDAC3-215ENST00000519474 NDUFA4L2Q9NRX3 87 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 C19orf73Q9NVV2 129 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 COMMD9Q9P000 198 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 MTFP1Q9UDX5 166 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 NSG2Q9Y328 171 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 U3KQK5 164 aa7.09□□□□□ -1.27
HDAC3-215ENST00000519474 TRAV25A0A0B4J276 109 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 TSTD3H0UI37 97 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 H0Y980 276 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 H3BMQ9 156 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 LGALS9O00182 355 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 IFNA7P01567 189 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 IGKV1-39P01597 117 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 CD3DP04234 171 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 IGKV1D-39P04432 117 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 SERPINE2P07093 398 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 FRMD6-AS1P0C7T7 363 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 DEFA4P12838 97 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 HIST1H1BP16401 226 aaKnown RBP7.08□□□□□ -1.28
HDAC3-215ENST00000519474 EDN2P20800 178 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 DDTP30046 118 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 CCR6P51684 374 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 DEFA1P59665 94 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 DEFA3P59666 94 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 RAB2AP61019 212 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 DEFB114Q30KQ6 69 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 RNASE12Q5GAN4 147 aaKnown RBP7.08□□□□□ -1.28
HDAC3-215ENST00000519474 SLC16A13Q7RTY0 426 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 TBC1D26Q86UD7 250 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 LHFPL1Q86WI0 220 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 C9orf62Q8N4C0 152 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 HSD17B11Q8NBQ5 300 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 RAB2BQ8WUD1 216 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 CACNG8Q8WXS5 425 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 SEC22AQ96IW7 307 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 RNF2Q99496 336 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 SRSF8Q9BRL6 282 aaKnown RBP7.08□□□□□ -1.28
HDAC3-215ENST00000519474 THAP7Q9BT49 309 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-215ENST00000519474 COMMD5Q9GZQ3 224 aa7.08□□□□□ -1.28
HDAC3-215ENST00000519474 STRAPQ9Y3F4 350 aaKnown RBP7.08□□□□□ -1.28
HDAC3-215ENST00000519474 TRBV7-1A0A0A6YYK4 115 aa7.07□□□□□ -1.28
HDAC3-215ENST00000519474 C5orf52A6NGY3 159 aa7.07□□□□□ -1.28
HDAC3-215ENST00000519474 A8MZ25 164 aa7.07□□□□□ -1.28
HDAC3-215ENST00000519474 SCGB2A1O75556 95 aa7.07□□□□□ -1.28
HDAC3-215ENST00000519474 C1QBP02746 253 aa7.07□□□□□ -1.28
HDAC3-215ENST00000519474 OR13C7P0DN81 318 aa7.07□□□□□ -1.28
HDAC3-215ENST00000519474 ZNF25P17030 456 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-215ENST00000519474 MFAP2P55001 183 aa7.07□□□□□ -1.28
HDAC3-215ENST00000519474 RPS20P60866 119 aaKnown RBP7.07□□□□□ -1.28
HDAC3-215ENST00000519474 WT1-ASQ06250 92 aa7.07□□□□□ -1.28
HDAC3-215ENST00000519474 PMS2P11Q13670 270 aa7.07□□□□□ -1.28
HDAC3-215ENST00000519474 OR8G2PQ6IF36 304 aa7.07□□□□□ -1.28
HDAC3-215ENST00000519474 TMEM229BQ8NBD8 167 aa7.07□□□□□ -1.28
HDAC3-215ENST00000519474 OR1L8Q8NGR8 309 aa7.07□□□□□ -1.28
HDAC3-215ENST00000519474 ZNF502Q8TBZ5 544 aa7.07□□□□□ -1.28
HDAC3-215ENST00000519474 MISP3Q96FF7 219 aa7.07□□□□□ -1.28
HDAC3-215ENST00000519474 TMEM208Q9BTX3 173 aa7.07□□□□□ -1.28
HDAC3-215ENST00000519474 QTRT1Q9BXR0 403 aaKnown RBP7.07□□□□□ -1.28
HDAC3-215ENST00000519474 PEMTQ9UBM1 199 aa7.07□□□□□ -1.28
HDAC3-215ENST00000519474 OR51B2Q9Y5P1 312 aa7.07□□□□□ -1.28
HDAC3-215ENST00000519474 DNAH9Q9NYC9 4486 aa7.06□□□□□ -1.28
HDAC3-215ENST00000519474 FABP12A6NFH5 140 aa7.06□□□□□ -1.28
HDAC3-215ENST00000519474 C2orf70A6NJV1 201 aa7.06□□□□□ -1.28
HDAC3-215ENST00000519474 IFNA17P01571 189 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms