RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 MPV17L2Q567V2 206 aa10.28□□□□□ -0.76
PCDHGA6-201ENST00000517434 TM2D1Q9BX74 207 aa10.28□□□□□ -0.76
PCDHGA6-201ENST00000517434 C1QTNF5Q9BXJ0 243 aa10.28□□□□□ -0.76
PCDHGA6-201ENST00000517434 HOXA3O43365 443 aaPredicted RBP10.27□□□□□ -0.76
PCDHGA6-201ENST00000517434 CRYBA2P53672 197 aa10.27□□□□□ -0.76
PCDHGA6-201ENST00000517434 OSR1Q8TAX0 266 aaPredicted RBP10.27□□□□□ -0.76
PCDHGA6-201ENST00000517434 TSC2P49815 1807 aa10.27□□□□□ -0.76
PCDHGA6-201ENST00000517434 HIGD1CA8MV81 97 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 CX3CL1P78423 397 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 EGR4Q05215 589 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 ASPHD2Q6ICH7 369 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 TEX38Q6PEX7 206 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 DRAM1Q8N682 238 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 C16orf92Q96LL3 132 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 ZNF318Q5VUA4 2279 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 ATRXP46100 2492 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 TRAV1-1A0A0B4J248 108 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 A0A0G2JMM0 328 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 A0A1W2PPB8 328 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 KIR3DP1A8MWS1 328 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 LINC00271P0C7V0 271 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 SNRPD3P62318 126 aaKnown RBP10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 SYT8Q8NBV8 401 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 FLVCR1-AS1Q8TAF5 88 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 SLC25A2Q9BXI2 301 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 PHLDA3Q9Y5J5 127 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 IGKV3D-15A0A087WSY6 115 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 NPSP0C0P6 89 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 PSG9Q00887 426 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 ACP7Q6ZNF0 438 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 LINC00312Q9Y6C7 94 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 CACNA1HO95180 2353 aa10.27□□□□□ -0.77
PCDHGA6-201ENST00000517434 IGHV3-72A0A0B4J1Y9 119 aa10.26□□□□□ -0.77
PCDHGA6-201ENST00000517434 MEIG1Q5JSS6 88 aa10.26□□□□□ -0.77
PCDHGA6-201ENST00000517434 ARTNQ5T4W7 220 aa10.26□□□□□ -0.77
PCDHGA6-201ENST00000517434 EAF1Q96JC9 268 aaPredicted RBP10.26□□□□□ -0.77
PCDHGA6-201ENST00000517434 PLSCR4Q9NRQ2 329 aa10.26□□□□□ -0.77
PCDHGA6-201ENST00000517434 SCN5AQ14524 2016 aa10.26□□□□□ -0.77
PCDHGA6-201ENST00000517434 NAPSAO96009 420 aa10.26□□□□□ -0.77
PCDHGA6-201ENST00000517434 SLC25A16P16260 332 aa10.26□□□□□ -0.77
PCDHGA6-201ENST00000517434 GNLYP22749 145 aa10.26□□□□□ -0.77
PCDHGA6-201ENST00000517434 ERVK11-1P61568 191 aa10.26□□□□□ -0.77
PCDHGA6-201ENST00000517434 TFF3Q07654 80 aa10.26□□□□□ -0.77
PCDHGA6-201ENST00000517434 TMEM256Q8N2U0 113 aa10.26□□□□□ -0.77
PCDHGA6-201ENST00000517434 HBDP02042 147 aa10.26□□□□□ -0.77
PCDHGA6-201ENST00000517434 SPINK8P0C7L1 97 aa10.26□□□□□ -0.77
PCDHGA6-201ENST00000517434 NPPCP23582 126 aa10.26□□□□□ -0.77
PCDHGA6-201ENST00000517434 ZNF146Q15072 292 aa10.26□□□□□ -0.77
PCDHGA6-201ENST00000517434 RNASEH2CQ8TDP1 164 aaKnown RBP10.26□□□□□ -0.77
PCDHGA6-201ENST00000517434 DOCK6Q96HP0 2047 aa10.25□□□□□ -0.77
PCDHGA6-201ENST00000517434 PPP1R17O96001 155 aa10.25□□□□□ -0.77
PCDHGA6-201ENST00000517434 ACTL10Q5JWF8 245 aa10.25□□□□□ -0.77
PCDHGA6-201ENST00000517434 GPR82Q96P67 336 aa10.25□□□□□ -0.77
PCDHGA6-201ENST00000517434 SCGB3A1Q96QR1 104 aa10.25□□□□□ -0.77
PCDHGA6-201ENST00000517434 REPIN1Q9BWE0 567 aaKnown RBP10.25□□□□□ -0.77
PCDHGA6-201ENST00000517434 TGFBR3LH3BV60 316 aa10.25□□□□□ -0.77
PCDHGA6-201ENST00000517434 NBEAP1P0C6P0 100 aa10.25□□□□□ -0.77
PCDHGA6-201ENST00000517434 ADCYAP1P18509 176 aa10.25□□□□□ -0.77
PCDHGA6-201ENST00000517434 FBLN5Q9UBX5 448 aa10.25□□□□□ -0.77
PCDHGA6-201ENST00000517434 APELAP0DMC3 54 aa10.25□□□□□ -0.77
PCDHGA6-201ENST00000517434 GEMIN7Q9H840 131 aaKnown RBP10.25□□□□□ -0.77
PCDHGA6-201ENST00000517434 PEMTQ9UBM1 199 aa10.25□□□□□ -0.77
PCDHGA6-201ENST00000517434 THADAQ6YHU6 1953 aa10.25□□□□□ -0.77
PCDHGA6-201ENST00000517434 DOCK4Q8N1I0 1966 aa10.25□□□□□ -0.77
PCDHGA6-201ENST00000517434 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.25□□□□□ -0.77
PCDHGA6-201ENST00000517434 DPM2O94777 84 aa10.25□□□□□ -0.77
PCDHGA6-201ENST00000517434 OCC1Q8TAD7 63 aa10.25□□□□□ -0.77
PCDHGA6-201ENST00000517434 ZNF48Q96MX3 618 aaPredicted RBP10.25□□□□□ -0.77
PCDHGA6-201ENST00000517434 RSPO3Q9BXY4 272 aaPredicted RBP10.25□□□□□ -0.77
PCDHGA6-201ENST00000517434 CDKN1AP38936 164 aa10.24□□□□□ -0.77
PCDHGA6-201ENST00000517434 RNASE7Q9H1E1 156 aaKnown RBP10.24□□□□□ -0.77
PCDHGA6-201ENST00000517434 C11orf68Q9H3H3 251 aaKnown RBP10.24□□□□□ -0.77
PCDHGA6-201ENST00000517434 C3orf79P0CE67 100 aa10.24□□□□□ -0.77
PCDHGA6-201ENST00000517434 MST1P26927 711 aa10.24□□□□□ -0.77
PCDHGA6-201ENST00000517434 SSBP2P81877 361 aaPredicted RBP10.24□□□□□ -0.77
PCDHGA6-201ENST00000517434 PSG7Q13046 419 aa10.24□□□□□ -0.77
PCDHGA6-201ENST00000517434 SFTA2Q6UW10 78 aa10.24□□□□□ -0.77
PCDHGA6-201ENST00000517434 NPIPB3Q92617 1050 aa10.24□□□□□ -0.77
PCDHGA6-201ENST00000517434 C18orf12Q96KH6 178 aa10.24□□□□□ -0.77
PCDHGA6-201ENST00000517434 NAA38Q9BRA0 125 aaKnown RBP10.24□□□□□ -0.77
PCDHGA6-201ENST00000517434 THSD7BQ9C0I4 1608 aa10.24□□□□□ -0.77
PCDHGA6-201ENST00000517434 A0A1W2PRE2 83 aa10.24□□□□□ -0.77
PCDHGA6-201ENST00000517434 CACNG7P62955 275 aa10.24□□□□□ -0.77
PCDHGA6-201ENST00000517434 PLA2G2CQ5R387 149 aa10.24□□□□□ -0.77
PCDHGA6-201ENST00000517434 HCP5Q6MZN7 132 aa10.24□□□□□ -0.77
PCDHGA6-201ENST00000517434 MRAP2Q96G30 205 aa10.24□□□□□ -0.77
PCDHGA6-201ENST00000517434 DUX5Q96PT3 197 aa10.24□□□□□ -0.77
PCDHGA6-201ENST00000517434 WFDC1Q9HC57 220 aa10.24□□□□□ -0.77
PCDHGA6-201ENST00000517434 B4DSR2 109 aa10.23□□□□□ -0.77
PCDHGA6-201ENST00000517434 TRGV3P03979 118 aa10.23□□□□□ -0.77
PCDHGA6-201ENST00000517434 RNASE1P07998 156 aaKnown RBP10.23□□□□□ -0.77
PCDHGA6-201ENST00000517434 FAM166AQ6J272 317 aa10.23□□□□□ -0.77
PCDHGA6-201ENST00000517434 DMRTA2Q96SC8 542 aa10.23□□□□□ -0.77
PCDHGA6-201ENST00000517434 HTN1P15515 57 aa10.23□□□□□ -0.77
PCDHGA6-201ENST00000517434 ID3Q02535 119 aa10.23□□□□□ -0.77
PCDHGA6-201ENST00000517434 BMPERQ8N8U9 685 aa10.23□□□□□ -0.77
PCDHGA6-201ENST00000517434 TNFRSF14Q92956 283 aa10.23□□□□□ -0.77
PCDHGA6-201ENST00000517434 DEPPQ9NTK1 212 aa10.23□□□□□ -0.77
PCDHGA6-201ENST00000517434 MYLKQ15746 1914 aa10.23□□□□□ -0.77
PCDHGA6-201ENST00000517434 TRAV5A0A0B4J249 113 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms