RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 C16orf47Q6ZP98 133 aaPredicted RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 Q6ZQT7 251 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 LCA10Q71F78 164 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 MIR17HGQ75NE6 70 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 PHF5AQ7RTV0 110 aaKnown RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 LYZL2Q7Z4W2 148 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 DEFB128Q7Z7B8 93 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 LINC01551Q86U37 167 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 MARCH3Q86UD3 253 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 LHFPL1Q86WI0 220 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF695Q8IW36 515 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 CTAGE3PQ8IX95 158 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 MSRB3Q8IXL7 192 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 PDZD9Q8IXQ8 264 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 C8orf59Q8N0T1 100 aaPredicted RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 HIST3H2BBQ8N257 126 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 EXOC3-AS1Q8N2X6 119 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 MMGT1Q8N4V1 131 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 C11orf42Q8N5U0 333 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 MIR7-3HGQ8N6C7 128 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZFAND2AQ8N6M9 145 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 CD177Q8N6Q3 437 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 TCTEX1D1Q8N7M0 179 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 SPANXA2-OT1Q8N9U9 137 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 Q8N9W7 124 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 BPIFB6Q8NFQ5 453 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 OR4S1Q8NGB4 309 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 OR11G2Q8NGC1 345 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 OR4E2Q8NGC2 313 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 OR5A2Q8NGI9 324 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 OR51A4Q8NGJ6 313 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 OR5D16Q8NGK9 328 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 OR4C16Q8NGL9 310 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 OR2T10Q8NGZ9 312 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 OR10AC1Q8NH08 325 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 OR4A5Q8NH83 315 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 TERB2Q8NHR7 220 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 SGMS2Q8NHU3 365 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 LINC01006Q8NI28 216 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 TYMSOSQ8TAI1 123 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 LINC01560Q8TB33 94 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF418Q8TF45 676 aaPredicted RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 ITLN2Q8WWU7 325 aaPredicted RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 TMEM158Q8WZ71 300 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 H1FXQ92522 213 aaKnown RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 MAL2Q969L2 176 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF799Q96GE5 643 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 C14orf144Q96I85 54 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 TEX37Q96LM6 180 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 IMMP1LQ96LU5 166 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 PPP3R2Q96LZ3 170 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 IP6K3Q96PC2 410 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 ERMAPQ96PL5 475 aaPredicted RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 SCGB3A1Q96QR1 104 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 TP53RKQ96S44 253 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 GPX7Q96SL4 187 aaPredicted RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 HIST1H2BLQ99880 126 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 B9D2Q9BPU9 175 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 TM2D3Q9BRN9 247 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 LINC00467Q9BRT7 94 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 PRADC1Q9BSG0 188 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 NDFIP1Q9BT67 221 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 PSMG3Q9BT73 122 aaPredicted RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 UPK3BQ9BT76 320 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 ADAT1Q9BUB4 502 aaKnown RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 DERL1Q9BUN8 251 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 SPANXDQ9BXN6 97 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 SMIM3Q9BZL3 60 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 PLA2G2FQ9BZM2 168 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 LINC00470Q9BZP3 86 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 TMEM191AQ9H0A3 160 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 GABARAPL1Q9H0R8 117 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 LPAR5Q9H1C0 372 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 TMEM133Q9H2Q1 129 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 C11orf1Q9H5F2 150 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 RERGLQ9H628 205 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 CACYBPQ9HB71 228 aaKnown RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 TAF9BQ9HBM6 251 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 FAM60AQ9NP50 221 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 LHX9Q9NQ69 397 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 TNFRSF19Q9NS68 423 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF355PQ9NSJ1 428 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 CBLN4Q9NTU7 201 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 SLC39A9Q9NUM3 307 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF586Q9NXT0 402 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 COA4Q9NYJ1 87 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 C21orf62Q9NYP8 219 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 OR5AC2Q9NZP5 309 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 CCDC167Q9P0B6 97 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 NAT8BQ9UHF3 227 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF230Q9UIE0 474 aaPredicted RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 GNG8Q9UK08 70 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF222Q9UK12 451 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 SNX12Q9UMY4 172 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 HIGD1AQ9Y241 93 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 LINC00588Q9Y4M8 146 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 U3KQ87 197 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 ADGRL1O94910 1474 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 MYOM2P54296 1465 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 MBD5Q9P267 1494 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms