RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 PRM1P04553 51 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 CRYGAP11844 174 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 MIFP14174 115 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 CFL1P23528 166 aaKnown RBP-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 F8A1P23610 371 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 MAP1BP46821 2468 aaKnown RBP-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 CD151P48509 253 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 RPL37P61927 97 aaKnown RBP-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 RBM3P98179 157 aaKnown RBP-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 PPP1R1AQ13522 171 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 DOCK1Q14185 1865 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 STK38Q15208 465 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 KLK9Q2XQG4 91 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 OCIAD2Q56VL3 154 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 IBA57Q5T440 356 aaKnown RBP-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 SSX6Q7RTT6 188 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 BPIFA4PQ86YQ2 179 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 CLVS1Q8IUQ0 354 aaPredicted RBP-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 IQCF2Q8IXL9 164 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 C1orf174Q8IYL3 243 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 ZNF321PQ8N8H1 164 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 GPR32P1Q8NGA4 272 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 OR52L1Q8NGH7 329 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 OR52K2Q8NGK3 314 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 OR10J5Q8NHC4 309 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 PFN4Q8NHR9 129 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 RNASE6Q93091 150 aaKnown RBP-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 CIDECQ96AQ7 238 aaPredicted RBP-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 GPR146Q96CH1 333 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 LINC00052Q96N35 136 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 ERBINQ96RT1 1412 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 TMEM109Q9BVC6 243 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 UGT2B28Q9BY64 529 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 FAM96AQ9H5X1 160 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 NHP2Q9NX24 153 aaKnown RBP-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 PAQR5Q9NXK6 330 aaPredicted RBP-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 STMN3Q9NZ72 180 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 IL36BQ9NZH7 164 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 CLEC2DQ9UHP7 191 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 ANAPC10Q9UM13 185 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 EPDR1Q9UM22 224 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 PRELID1Q9Y255 219 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 RBMX2Q9Y388 322 aaKnown RBP-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 HDGFL3Q9Y3E1 203 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 ACANP16112 2415 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 PIK3C2AO00443 1686 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 USP54Q70EL1 1684 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 ABCC12Q96J65 1359 aa-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 SPTBN1Q01082 2364 aaKnown RBP-0.34□□□□□ -2.46
RNU4-49P-201ENST00000516080 HECW1Q76N89 1606 aa-0.35□□□□□ -2.46
RNU4-49P-201ENST00000516080 HERC2O95714 4834 aa-0.35□□□□□ -2.46
RNU4-49P-201ENST00000516080 LAMA5O15230 3695 aa-0.35□□□□□ -2.46
RNU4-49P-201ENST00000516080 CNOT1A5YKK6 2376 aaKnown RBP-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 SOGA1O94964 1423 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 NPATQ14207 1427 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 TENM2Q9NT68 2774 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 A0A096LPI6 279 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 GOLGA8QA0A0J9YX86 632 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 TCRBV4S1A1TA0A5B7 111 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 GOLGA8MH3BSY2 632 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 GPR171O14626 319 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 NEMFO60524 1076 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 ERC2-IT1O76042 136 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 GP1BAP07359 652 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 COX6A1P12074 109 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 COX7CP15954 63 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 AGTR1P30556 359 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 ANP32AP39687 249 aaKnown RBP-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 FXYD4P59646 89 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 RPL37AP61513 92 aaKnown RBP-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 DAD1P61803 113 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 RHOBP62745 196 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 VSNL1P62760 191 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 FKBP1AP62942 108 aaKnown RBP-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 RPL18Q07020 188 aaKnown RBP-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 GNA13Q14344 377 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 EDDM3AQ14507 147 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 WFDC2Q14508 124 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 EBPQ15125 230 aaKnown RBP-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 DEFB113Q30KQ7 82 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 TNFAIP8L3Q5GJ75 292 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 C5orf46Q6UWT4 87 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 C4orf22Q6V702 233 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 Q6ZQT0 140 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 MIR17HGQ75NE6 70 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 SPERTQ8NA61 448 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 C5orf17Q8NAS9 161 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 OR5A1Q8NGJ0 315 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 OR2T35Q8NGX2 323 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 NAT14Q8WUY8 206 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 SMIM12Q96EX1 92 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 ANKRD36BP1Q96IX9 119 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 TMEM56Q96MV1 263 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 PARD6GQ9BYG4 376 aaPredicted RBP-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 OR8D2Q9GZM6 311 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 SLC22A4Q9H015 551 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 HRASLSQ9HDD0 168 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 C14orf132Q9NPU4 83 aa-0.35□□□□□ -2.47
RNU4-49P-201ENST00000516080 HS3ST2Q9Y278 367 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms