RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 C19orf73Q9NVV2 129 aa13.65□□□□□ -0.22
CLDND1-220ENST00000508902 A0A1B0GU03 582 aa13.64□□□□□ -0.23
CLDND1-220ENST00000508902 DUXBA0A1W2PPF3 345 aa13.64□□□□□ -0.23
CLDND1-220ENST00000508902 LYRM1O43325 122 aa13.64□□□□□ -0.23
CLDND1-220ENST00000508902 HOXB5P09067 269 aa13.64□□□□□ -0.23
CLDND1-220ENST00000508902 ELLP55199 621 aaPredicted RBP13.64□□□□□ -0.23
CLDND1-220ENST00000508902 UBE2MP61081 183 aaKnown RBP13.64□□□□□ -0.23
CLDND1-220ENST00000508902 IFITM3Q01628 133 aa13.64□□□□□ -0.23
CLDND1-220ENST00000508902 DHRS2Q13268 280 aa13.64□□□□□ -0.23
CLDND1-220ENST00000508902 GGNBP1Q5YKI7 109 aa13.64□□□□□ -0.23
CLDND1-220ENST00000508902 LINC00299Q6ZSB3 139 aa13.64□□□□□ -0.23
CLDND1-220ENST00000508902 OR52B4Q8NGK2 314 aa13.64□□□□□ -0.23
CLDND1-220ENST00000508902 OR10C1Q96KK4 312 aa13.64□□□□□ -0.23
CLDND1-220ENST00000508902 ZFAND3Q9H8U3 227 aa13.64□□□□□ -0.23
CLDND1-220ENST00000508902 ENY2Q9NPA8 101 aa13.64□□□□□ -0.23
CLDND1-220ENST00000508902 HEYLQ9NQ87 328 aaPredicted RBP13.64□□□□□ -0.23
CLDND1-220ENST00000508902 TECRQ9NZ01 308 aaKnown RBP13.64□□□□□ -0.23
CLDND1-220ENST00000508902 PTTG2Q9NZH5 202 aa13.64□□□□□ -0.23
CLDND1-220ENST00000508902 TMEM50AO95807 157 aa13.63□□□□□ -0.23
CLDND1-220ENST00000508902 IGKV1-17P01599 117 aa13.63□□□□□ -0.23
CLDND1-220ENST00000508902 OR4E1P0C645 316 aa13.63□□□□□ -0.23
CLDND1-220ENST00000508902 HTR2BP41595 481 aa13.63□□□□□ -0.23
CLDND1-220ENST00000508902 C20orf24Q9BUV8 137 aa13.63□□□□□ -0.23
CLDND1-220ENST00000508902 CCDC32Q9BV29 185 aa13.63□□□□□ -0.23
CLDND1-220ENST00000508902 UFC1Q9Y3C8 167 aa13.63□□□□□ -0.23
CLDND1-220ENST00000508902 IGHV3-49A0A0A0MS15 119 aa13.62□□□□□ -0.23
CLDND1-220ENST00000508902 NUPL2O15504 423 aaKnown RBP13.62□□□□□ -0.23
CLDND1-220ENST00000508902 GNG7O60262 68 aa13.62□□□□□ -0.23
CLDND1-220ENST00000508902 NPY1RP25929 384 aa13.62□□□□□ -0.23
CLDND1-220ENST00000508902 OPRK1P41145 380 aa13.62□□□□□ -0.23
CLDND1-220ENST00000508902 DCTN2Q13561 401 aaKnown RBP13.62□□□□□ -0.23
CLDND1-220ENST00000508902 PRSS54Q6PEW0 395 aa13.62□□□□□ -0.23
CLDND1-220ENST00000508902 TOMM20LQ6UXN7 152 aa13.62□□□□□ -0.23
CLDND1-220ENST00000508902 LYG2Q86SG7 212 aa13.62□□□□□ -0.23
CLDND1-220ENST00000508902 OR4X1Q8NH49 305 aa13.62□□□□□ -0.23
CLDND1-220ENST00000508902 DTD1Q8TEA8 209 aa13.62□□□□□ -0.23
CLDND1-220ENST00000508902 C20orf85Q9H1P6 137 aa13.62□□□□□ -0.23
CLDND1-220ENST00000508902 DAZ1Q9NQZ3 744 aaKnown RBP13.62□□□□□ -0.23
CLDND1-220ENST00000508902 MRPL27Q9P0M9 148 aaKnown RBP13.62□□□□□ -0.23
CLDND1-220ENST00000508902 C15orf62A8K5M9 175 aa13.61□□□□□ -0.23
CLDND1-220ENST00000508902 A8MZ25 164 aa13.61□□□□□ -0.23
CLDND1-220ENST00000508902 CLN5O75503 358 aa13.61□□□□□ -0.23
CLDND1-220ENST00000508902 SCAF4O95104 1147 aaKnown RBP13.61□□□□□ -0.23
CLDND1-220ENST00000508902 APOHP02749 345 aaPredicted RBP13.61□□□□□ -0.23
CLDND1-220ENST00000508902 SLC25A6P12236 298 aa13.61□□□□□ -0.23
CLDND1-220ENST00000508902 LILRB2Q8N423 598 aa13.61□□□□□ -0.23
CLDND1-220ENST00000508902 DUSP18Q8NEJ0 188 aa13.61□□□□□ -0.23
CLDND1-220ENST00000508902 OR1S1Q8NH92 325 aa13.61□□□□□ -0.23
CLDND1-220ENST00000508902 MARC2Q969Z3 335 aa13.61□□□□□ -0.23
CLDND1-220ENST00000508902 PALMDQ9NP74 551 aa13.61□□□□□ -0.23
CLDND1-220ENST00000508902 K7EMT4 169 aa13.6□□□□□ -0.23
CLDND1-220ENST00000508902 CORTO00230 105 aa13.6□□□□□ -0.23
CLDND1-220ENST00000508902 IGLC1P0CG04 106 aa13.6□□□□□ -0.23
CLDND1-220ENST00000508902 IAPPP10997 89 aa13.6□□□□□ -0.23
CLDND1-220ENST00000508902 NPBWR1P48145 328 aa13.6□□□□□ -0.23
CLDND1-220ENST00000508902 SUB1P53999 127 aaKnown RBP eCLIP13.6□□□□□ -0.23
CLDND1-220ENST00000508902 CD81P60033 236 aa13.6□□□□□ -0.23
CLDND1-220ENST00000508902 TIGITQ495A1 244 aa13.6□□□□□ -0.23
CLDND1-220ENST00000508902 NEURL2Q9BR09 285 aa13.6□□□□□ -0.23
CLDND1-220ENST00000508902 GAR1Q9NY12 217 aaKnown RBP13.6□□□□□ -0.23
CLDND1-220ENST00000508902 SMPXQ9UHP9 88 aa13.6□□□□□ -0.23
CLDND1-220ENST00000508902 TMED3Q9Y3Q3 217 aa13.6□□□□□ -0.23
CLDND1-220ENST00000508902 IGHV3OR16-13A0A075B7E8 117 aa13.59□□□□□ -0.23
CLDND1-220ENST00000508902 IGHV3-74A0A0B4J1X5 117 aa13.59□□□□□ -0.23
CLDND1-220ENST00000508902 IGHV7-4-1A0A0J9YVY3 117 aa13.59□□□□□ -0.23
CLDND1-220ENST00000508902 CENPXA8MT69 81 aa13.59□□□□□ -0.23
CLDND1-220ENST00000508902 TCRBP04435 133 aa13.59□□□□□ -0.23
CLDND1-220ENST00000508902 RND2P52198 227 aa13.59□□□□□ -0.23
CLDND1-220ENST00000508902 RELQ04864 619 aaPredicted RBP13.59□□□□□ -0.23
CLDND1-220ENST00000508902 GUCA2BQ16661 112 aa13.59□□□□□ -0.23
CLDND1-220ENST00000508902 LINC00322Q6ZN03 302 aaPredicted RBP13.59□□□□□ -0.23
CLDND1-220ENST00000508902 DEFB125Q8N687 156 aa13.59□□□□□ -0.23
CLDND1-220ENST00000508902 RNASEH2CQ8TDP1 164 aaKnown RBP13.59□□□□□ -0.23
CLDND1-220ENST00000508902 MAGT1Q9H0U3 335 aa13.59□□□□□ -0.23
CLDND1-220ENST00000508902 PUS1Q9Y606 427 aaKnown RBP eCLIP13.59□□□□□ -0.23
CLDND1-220ENST00000508902 TRAV6A0A075B6T7 132 aa13.58□□□□□ -0.24
CLDND1-220ENST00000508902 CHEK1O14757 476 aa13.58□□□□□ -0.24
CLDND1-220ENST00000508902 ZNF600Q6ZNG1 722 aa13.58□□□□□ -0.24
CLDND1-220ENST00000508902 TMEM116Q8NCL8 245 aa13.58□□□□□ -0.24
CLDND1-220ENST00000508902 OR4D5Q8NGN0 318 aa13.58□□□□□ -0.24
CLDND1-220ENST00000508902 CITED4Q96RK1 184 aa13.58□□□□□ -0.24
CLDND1-220ENST00000508902 RNF2Q99496 336 aa13.58□□□□□ -0.24
CLDND1-220ENST00000508902 SEC22CQ9BRL7 303 aa13.58□□□□□ -0.24
CLDND1-220ENST00000508902 FAM90A26D6RGX4 464 aa13.57□□□□□ -0.24
CLDND1-220ENST00000508902 PRSS46E5RG02 174 aa13.57□□□□□ -0.24
CLDND1-220ENST00000508902 YIF1AO95070 293 aa13.57□□□□□ -0.24
CLDND1-220ENST00000508902 ASAH1Q13510 395 aa13.57□□□□□ -0.24
CLDND1-220ENST00000508902 C4orf46Q504U0 113 aa13.57□□□□□ -0.24
CLDND1-220ENST00000508902 FAM90A2PQ658T7 463 aa13.57□□□□□ -0.24
CLDND1-220ENST00000508902 SLC16A13Q7RTY0 426 aa13.57□□□□□ -0.24
CLDND1-220ENST00000508902 MITD1Q8WV92 249 aa13.57□□□□□ -0.24
CLDND1-220ENST00000508902 S100ZQ8WXG8 99 aa13.57□□□□□ -0.24
CLDND1-220ENST00000508902 RHPN1-AS1Q9BWJ2 59 aa13.57□□□□□ -0.24
CLDND1-220ENST00000508902 HIPK2Q9H2X6 1198 aa13.57□□□□□ -0.24
CLDND1-220ENST00000508902 NUDT15Q9NV35 164 aa13.57□□□□□ -0.24
CLDND1-220ENST00000508902 U3KQ87 197 aa13.57□□□□□ -0.24
CLDND1-220ENST00000508902 IGKV1D-37A0A075B6S9 117 aa13.56□□□□□ -0.24
CLDND1-220ENST00000508902 RBMY1BA6NDE4 496 aaKnown RBP13.56□□□□□ -0.24
CLDND1-220ENST00000508902 RBMY1EA6NEQ0 496 aaKnown RBP13.56□□□□□ -0.24
CLDND1-220ENST00000508902 UPK1BO75841 260 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms