RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	WWC2-AS2	Q96NR7	200 aa		10.63	□□□□□ -0.71
CCHCR1-222	ENST00000507459	SDHC	Q99643	169 aa	Predicted RBP	10.63	□□□□□ -0.71
CCHCR1-222	ENST00000507459	WFDC10A	Q9H1F0	79 aa		10.63	□□□□□ -0.71
CCHCR1-222	ENST00000507459	HIPK2	Q9H2X6	1198 aa		10.63	□□□□□ -0.71
CCHCR1-222	ENST00000507459	FNDC4	Q9H6D8	234 aa	Predicted RBP	10.63	□□□□□ -0.71
CCHCR1-222	ENST00000507459	ZMAT4	Q9H898	229 aa		10.63	□□□□□ -0.71
CCHCR1-222	ENST00000507459	IGHV3-49	A0A0A0MS15	119 aa		10.62	□□□□□ -0.71
CCHCR1-222	ENST00000507459	C15orf62	A8K5M9	175 aa		10.62	□□□□□ -0.71
CCHCR1-222	ENST00000507459	OR11H12	B2RN74	326 aa		10.62	□□□□□ -0.71
CCHCR1-222	ENST00000507459		K7EMT4	169 aa		10.62	□□□□□ -0.71
CCHCR1-222	ENST00000507459	TMEM50A	O95807	157 aa		10.62	□□□□□ -0.71
CCHCR1-222	ENST00000507459	PPP1R1A	Q13522	171 aa		10.62	□□□□□ -0.71
CCHCR1-222	ENST00000507459	BSX	Q3C1V8	233 aa		10.62	□□□□□ -0.71
CCHCR1-222	ENST00000507459	ANKRD55	Q3KP44	614 aa		10.62	□□□□□ -0.71
CCHCR1-222	ENST00000507459	SLC16A13	Q7RTY0	426 aa		10.62	□□□□□ -0.71
CCHCR1-222	ENST00000507459	SLC24A4	Q8NFF2	622 aa		10.62	□□□□□ -0.71
CCHCR1-222	ENST00000507459	OR1S1	Q8NH92	325 aa		10.62	□□□□□ -0.71
CCHCR1-222	ENST00000507459	ZNF414	Q96IQ9	312 aa		10.62	□□□□□ -0.71
CCHCR1-222	ENST00000507459	RCHY1	Q96PM5	261 aa		10.62	□□□□□ -0.71
CCHCR1-222	ENST00000507459	MRPL36	Q9P0J6	103 aa	Known RBP	10.62	□□□□□ -0.71
CCHCR1-222	ENST00000507459	IGHV3OR16-13	A0A075B7E8	117 aa		10.61	□□□□□ -0.71
CCHCR1-222	ENST00000507459	IGHV3-74	A0A0B4J1X5	117 aa		10.61	□□□□□ -0.71
CCHCR1-222	ENST00000507459	TRAV25	A0A0B4J276	109 aa		10.61	□□□□□ -0.71
CCHCR1-222	ENST00000507459	NAP1L6	A6NFF2	107 aa		10.61	□□□□□ -0.71
CCHCR1-222	ENST00000507459	SFT2D2	O95562	160 aa		10.61	□□□□□ -0.71
CCHCR1-222	ENST00000507459	TNFRSF9	Q07011	255 aa		10.61	□□□□□ -0.71
CCHCR1-222	ENST00000507459	C2orf83	Q53S99	150 aa		10.61	□□□□□ -0.71
CCHCR1-222	ENST00000507459	LAMTOR1	Q6IAA8	161 aa		10.61	□□□□□ -0.71
CCHCR1-222	ENST00000507459	TMEM116	Q8NCL8	245 aa		10.61	□□□□□ -0.71
CCHCR1-222	ENST00000507459	RBKS	Q9H477	322 aa		10.61	□□□□□ -0.71
CCHCR1-222	ENST00000507459	SRD5A3	Q9H8P0	318 aa		10.61	□□□□□ -0.71
CCHCR1-222	ENST00000507459	CACFD1	Q9UGQ2	172 aa		10.61	□□□□□ -0.71
CCHCR1-222	ENST00000507459	SMPX	Q9UHP9	88 aa		10.61	□□□□□ -0.71
CCHCR1-222	ENST00000507459	TRAV14DV4	A0A0A6YYC5	116 aa		10.6	□□□□□ -0.71
CCHCR1-222	ENST00000507459	PIGBOS1	A0A0B4J2F0	54 aa		10.6	□□□□□ -0.71
CCHCR1-222	ENST00000507459	IGHV7-4-1	A0A0J9YVY3	117 aa		10.6	□□□□□ -0.71
CCHCR1-222	ENST00000507459		A0A1B0GU03	582 aa		10.6	□□□□□ -0.71
CCHCR1-222	ENST00000507459	RPS10-NUDT3	A0A1W2PQS6	291 aa		10.6	□□□□□ -0.71
CCHCR1-222	ENST00000507459	CENPX	A8MT69	81 aa		10.6	□□□□□ -0.71
CCHCR1-222	ENST00000507459	CLN5	O75503	358 aa		10.6	□□□□□ -0.71
CCHCR1-222	ENST00000507459	IFNA10	P01566	189 aa		10.6	□□□□□ -0.71
CCHCR1-222	ENST00000507459	IL7	P13232	177 aa		10.6	□□□□□ -0.71
CCHCR1-222	ENST00000507459	NPY1R	P25929	384 aa		10.6	□□□□□ -0.71
CCHCR1-222	ENST00000507459	HAGH	Q16775	308 aa		10.6	□□□□□ -0.71
CCHCR1-222	ENST00000507459	TOMM20L	Q6UXN7	152 aa		10.6	□□□□□ -0.71
CCHCR1-222	ENST00000507459	ZNF600	Q6ZNG1	722 aa		10.6	□□□□□ -0.71
CCHCR1-222	ENST00000507459	OR4X1	Q8NH49	305 aa		10.6	□□□□□ -0.71
CCHCR1-222	ENST00000507459	DTD1	Q8TEA8	209 aa		10.6	□□□□□ -0.71
CCHCR1-222	ENST00000507459	RHPN1-AS1	Q9BWJ2	59 aa		10.6	□□□□□ -0.71
CCHCR1-222	ENST00000507459	HSPB7	Q9UBY9	170 aa		10.6	□□□□□ -0.71
CCHCR1-222	ENST00000507459	FLVCR2	Q9UPI3	526 aa		10.6	□□□□□ -0.71
CCHCR1-222	ENST00000507459	PUS1	Q9Y606	427 aa	Known RBP eCLIP	10.6	□□□□□ -0.71
CCHCR1-222	ENST00000507459	DUXB	A0A1W2PPF3	345 aa		10.59	□□□□□ -0.71
CCHCR1-222	ENST00000507459	CHEK1	O14757	476 aa		10.59	□□□□□ -0.71
CCHCR1-222	ENST00000507459	NDUFB6	O95139	128 aa		10.59	□□□□□ -0.71
CCHCR1-222	ENST00000507459	HOXB5	P09067	269 aa		10.59	□□□□□ -0.71
CCHCR1-222	ENST00000507459	TMEM170A	Q8WVE7	144 aa		10.59	□□□□□ -0.71
CCHCR1-222	ENST00000507459	OR10C1	Q96KK4	312 aa		10.59	□□□□□ -0.71
CCHCR1-222	ENST00000507459	RNF2	Q99496	336 aa		10.59	□□□□□ -0.71
CCHCR1-222	ENST00000507459	SPAG8	Q99932	426 aa	Predicted RBP	10.59	□□□□□ -0.71
CCHCR1-222	ENST00000507459	TM2D3	Q9BRN9	247 aa		10.59	□□□□□ -0.71
CCHCR1-222	ENST00000507459	GINS3	Q9BRX5	216 aa		10.59	□□□□□ -0.71
CCHCR1-222	ENST00000507459	UBQLN2	Q9UHD9	624 aa		10.59	□□□□□ -0.71
CCHCR1-222	ENST00000507459	IGKV3-7	A0A075B6H7	116 aa		10.58	□□□□□ -0.72
CCHCR1-222	ENST00000507459	IGHV3-66	A0A0C4DH42	116 aa		10.58	□□□□□ -0.72
CCHCR1-222	ENST00000507459	RBMY1B	A6NDE4	496 aa	Known RBP	10.58	□□□□□ -0.72
CCHCR1-222	ENST00000507459	RBMY1E	A6NEQ0	496 aa	Known RBP	10.58	□□□□□ -0.72
CCHCR1-222	ENST00000507459	TSPAN4	O14817	238 aa		10.58	□□□□□ -0.72
CCHCR1-222	ENST00000507459	SCGB2A1	O75556	95 aa		10.58	□□□□□ -0.72
CCHCR1-222	ENST00000507459	RBMY1D	P0C7P1	496 aa	Known RBP	10.58	□□□□□ -0.72
CCHCR1-222	ENST00000507459	RND2	P52198	227 aa		10.58	□□□□□ -0.72
CCHCR1-222	ENST00000507459	TIGIT	Q495A1	244 aa		10.58	□□□□□ -0.72
CCHCR1-222	ENST00000507459	PRSS54	Q6PEW0	395 aa		10.58	□□□□□ -0.72
CCHCR1-222	ENST00000507459	NOXA1	Q86UR1	476 aa		10.58	□□□□□ -0.72
CCHCR1-222	ENST00000507459	LRTM2	Q8N967	370 aa		10.58	□□□□□ -0.72
CCHCR1-222	ENST00000507459	RNASEH2C	Q8TDP1	164 aa	Known RBP	10.58	□□□□□ -0.72
CCHCR1-222	ENST00000507459	C7orf50	Q9BRJ6	194 aa	Known RBP	10.58	□□□□□ -0.72
CCHCR1-222	ENST00000507459	TMED3	Q9Y3Q3	217 aa		10.58	□□□□□ -0.72
CCHCR1-222	ENST00000507459		U3KQ87	197 aa		10.58	□□□□□ -0.72
CCHCR1-222	ENST00000507459	C9orf170	A2RU37	121 aa		10.57	□□□□□ -0.72
CCHCR1-222	ENST00000507459	PITX3	O75364	302 aa		10.57	□□□□□ -0.72
CCHCR1-222	ENST00000507459	APOH	P02749	345 aa	Predicted RBP	10.57	□□□□□ -0.72
CCHCR1-222	ENST00000507459	IFNA4	P05014	189 aa		10.57	□□□□□ -0.72
CCHCR1-222	ENST00000507459	IAPP	P10997	89 aa		10.57	□□□□□ -0.72
CCHCR1-222	ENST00000507459	SLC25A4	P12235	298 aa		10.57	□□□□□ -0.72
CCHCR1-222	ENST00000507459	ANXA7	P20073	488 aa	Known RBP	10.57	□□□□□ -0.72
CCHCR1-222	ENST00000507459	BTC	P35070	178 aa		10.57	□□□□□ -0.72
CCHCR1-222	ENST00000507459	TFPI2	P48307	235 aa		10.57	□□□□□ -0.72
CCHCR1-222	ENST00000507459	UBE2M	P61081	183 aa	Known RBP	10.57	□□□□□ -0.72
CCHCR1-222	ENST00000507459	GGNBP1	Q5YKI7	109 aa		10.57	□□□□□ -0.72
CCHCR1-222	ENST00000507459	ETFRF1	Q6IPR1	90 aa		10.57	□□□□□ -0.72
CCHCR1-222	ENST00000507459	ACY3	Q96HD9	319 aa		10.57	□□□□□ -0.72
CCHCR1-222	ENST00000507459	SPATA25	Q9BR10	227 aa		10.57	□□□□□ -0.72
CCHCR1-222	ENST00000507459	ZFAND3	Q9H8U3	227 aa		10.57	□□□□□ -0.72
CCHCR1-222	ENST00000507459	TRAV30	A0A087WSZ9	112 aa		10.56	□□□□□ -0.72
CCHCR1-222	ENST00000507459	OR4C46	A6NHA9	309 aa		10.56	□□□□□ -0.72
CCHCR1-222	ENST00000507459	IGKV1-17	P01599	117 aa		10.56	□□□□□ -0.72
CCHCR1-222	ENST00000507459	OR4E1	P0C645	316 aa		10.56	□□□□□ -0.72
CCHCR1-222	ENST00000507459	C4orf46	Q504U0	113 aa		10.56	□□□□□ -0.72
CCHCR1-222	ENST00000507459	LINC00322	Q6ZN03	302 aa	Predicted RBP	10.56	□□□□□ -0.72

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