RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 A0A0B4J2A0 478 aa11.68□□□□□ -0.54
CLDND1-211ENST00000506575 SUPT4H1P63272 117 aaKnown RBP11.68□□□□□ -0.54
CLDND1-211ENST00000506575 PVRIGQ6DKI7 326 aa11.68□□□□□ -0.54
CLDND1-211ENST00000506575 LGI3Q8N145 548 aa11.68□□□□□ -0.54
CLDND1-211ENST00000506575 SPAG8Q99932 426 aaPredicted RBP11.68□□□□□ -0.54
CLDND1-211ENST00000506575 SLC25A21Q9BQT8 299 aaPredicted RBP11.68□□□□□ -0.54
CLDND1-211ENST00000506575 GINS3Q9BRX5 216 aa11.68□□□□□ -0.54
CLDND1-211ENST00000506575 HIPK2Q9H2X6 1198 aa11.68□□□□□ -0.54
CLDND1-211ENST00000506575 SHPKQ9UHJ6 478 aa11.68□□□□□ -0.54
CLDND1-211ENST00000506575 IGHV7-4-1A0A0J9YVY3 117 aa11.67□□□□□ -0.54
CLDND1-211ENST00000506575 RPS10-NUDT3A0A1W2PQS6 291 aa11.67□□□□□ -0.54
CLDND1-211ENST00000506575 TSPAN4O14817 238 aa11.67□□□□□ -0.54
CLDND1-211ENST00000506575 NXPH3O95157 252 aa11.67□□□□□ -0.54
CLDND1-211ENST00000506575 CCR6P51684 374 aa11.67□□□□□ -0.54
CLDND1-211ENST00000506575 BSXQ3C1V8 233 aa11.67□□□□□ -0.54
CLDND1-211ENST00000506575 TMEM128Q5BJH2 165 aa11.67□□□□□ -0.54
CLDND1-211ENST00000506575 TRIQKQ629K1 86 aa11.67□□□□□ -0.54
CLDND1-211ENST00000506575 LYZL2Q7Z4W2 148 aa11.67□□□□□ -0.54
CLDND1-211ENST00000506575 TMEM116Q8NCL8 245 aa11.67□□□□□ -0.54
CLDND1-211ENST00000506575 OR10C1Q96KK4 312 aa11.67□□□□□ -0.54
CLDND1-211ENST00000506575 SMPXQ9UHP9 88 aa11.67□□□□□ -0.54
CLDND1-211ENST00000506575 TRAV14DV4A0A0A6YYC5 116 aa11.66□□□□□ -0.54
CLDND1-211ENST00000506575 OR4C46A6NHA9 309 aa11.66□□□□□ -0.54
CLDND1-211ENST00000506575 TMEM50AO95807 157 aa11.66□□□□□ -0.54
CLDND1-211ENST00000506575 VAMP1P23763 118 aa11.66□□□□□ -0.54
CLDND1-211ENST00000506575 BMI1P35226 326 aa11.66□□□□□ -0.54
CLDND1-211ENST00000506575 SMCO1Q147U7 214 aa11.66□□□□□ -0.54
CLDND1-211ENST00000506575 LINC00322Q6ZN03 302 aaPredicted RBP11.66□□□□□ -0.54
CLDND1-211ENST00000506575 ZNF600Q6ZNG1 722 aa11.66□□□□□ -0.54
CLDND1-211ENST00000506575 SLC24A4Q8NFF2 622 aa11.66□□□□□ -0.54
CLDND1-211ENST00000506575 RHPN1-AS1Q9BWJ2 59 aa11.66□□□□□ -0.54
CLDND1-211ENST00000506575 SRRQ9GZT4 340 aa11.66□□□□□ -0.54
CLDND1-211ENST00000506575 NDUFA13Q9P0J0 144 aa11.66□□□□□ -0.54
CLDND1-211ENST00000506575 RBMY1BA6NDE4 496 aaKnown RBP11.65□□□□□ -0.54
CLDND1-211ENST00000506575 RBMY1EA6NEQ0 496 aaKnown RBP11.65□□□□□ -0.54
CLDND1-211ENST00000506575 C3orf84H3BNL1 204 aa11.65□□□□□ -0.54
CLDND1-211ENST00000506575 CLN5O75503 358 aa11.65□□□□□ -0.54
CLDND1-211ENST00000506575 RBMY1DP0C7P1 496 aaKnown RBP11.65□□□□□ -0.54
CLDND1-211ENST00000506575 C2orf83Q53S99 150 aa11.65□□□□□ -0.54
CLDND1-211ENST00000506575 NMSQ5H8A3 153 aa11.65□□□□□ -0.54
CLDND1-211ENST00000506575 TOMM20LQ6UXN7 152 aa11.65□□□□□ -0.54
CLDND1-211ENST00000506575 NOXA1Q86UR1 476 aa11.65□□□□□ -0.54
CLDND1-211ENST00000506575 OR4X1Q8NH49 305 aa11.65□□□□□ -0.54
CLDND1-211ENST00000506575 OR1S1Q8NH92 325 aa11.65□□□□□ -0.54
CLDND1-211ENST00000506575 RNASEH2CQ8TDP1 164 aaKnown RBP11.65□□□□□ -0.54
CLDND1-211ENST00000506575 CITED4Q96RK1 184 aa11.65□□□□□ -0.54
CLDND1-211ENST00000506575 FNDC4Q9H6D8 234 aaPredicted RBP11.65□□□□□ -0.54
CLDND1-211ENST00000506575 PUS1Q9Y606 427 aaKnown RBP eCLIP11.65□□□□□ -0.54
CLDND1-211ENST00000506575 IGHV3-49A0A0A0MS15 119 aa11.64□□□□□ -0.55
CLDND1-211ENST00000506575 DUXBA0A1W2PPF3 345 aa11.64□□□□□ -0.55
CLDND1-211ENST00000506575 CHEK1O14757 476 aa11.64□□□□□ -0.55
CLDND1-211ENST00000506575 IFNA10P01566 189 aa11.64□□□□□ -0.55
CLDND1-211ENST00000506575 NPY1RP25929 384 aa11.64□□□□□ -0.55
CLDND1-211ENST00000506575 TNFRSF9Q07011 255 aa11.64□□□□□ -0.55
CLDND1-211ENST00000506575 RBMS2Q15434 407 aaKnown RBP11.64□□□□□ -0.55
CLDND1-211ENST00000506575 MLANAQ16655 118 aa11.64□□□□□ -0.55
CLDND1-211ENST00000506575 CENPSQ8N2Z9 138 aa11.64□□□□□ -0.55
CLDND1-211ENST00000506575 MUC7Q8TAX7 377 aa11.64□□□□□ -0.55
CLDND1-211ENST00000506575 ZNF414Q96IQ9 312 aa11.64□□□□□ -0.55
CLDND1-211ENST00000506575 RNF2Q99496 336 aa11.64□□□□□ -0.55
CLDND1-211ENST00000506575 HSPB7Q9UBY9 170 aa11.64□□□□□ -0.55
CLDND1-211ENST00000506575 IGHV3OR16-13A0A075B7E8 117 aa11.63□□□□□ -0.55
CLDND1-211ENST00000506575 TRAV30A0A087WSZ9 112 aa11.63□□□□□ -0.55
CLDND1-211ENST00000506575 IGHV3-74A0A0B4J1X5 117 aa11.63□□□□□ -0.55
CLDND1-211ENST00000506575 A0A1B0GU03 582 aa11.63□□□□□ -0.55
CLDND1-211ENST00000506575 NAP1L6A6NFF2 107 aa11.63□□□□□ -0.55
CLDND1-211ENST00000506575 SLC25A4P12235 298 aa11.63□□□□□ -0.55
CLDND1-211ENST00000506575 ETFRF1Q6IPR1 90 aa11.63□□□□□ -0.55
CLDND1-211ENST00000506575 DTD1Q8TEA8 209 aa11.63□□□□□ -0.55
CLDND1-211ENST00000506575 GGTLC1Q9BX51 225 aa11.63□□□□□ -0.55
CLDND1-211ENST00000506575 RBKSQ9H477 322 aa11.63□□□□□ -0.55
CLDND1-211ENST00000506575 MRPL36Q9P0J6 103 aaKnown RBP11.63□□□□□ -0.55
CLDND1-211ENST00000506575 UBQLN2Q9UHD9 624 aa11.63□□□□□ -0.55
CLDND1-211ENST00000506575 LOC102724200A0A096LPH7 203 aaPredicted RBP11.62□□□□□ -0.55
CLDND1-211ENST00000506575 CENPXA8MT69 81 aa11.62□□□□□ -0.55
CLDND1-211ENST00000506575 CD5P06127 495 aa11.62□□□□□ -0.55
CLDND1-211ENST00000506575 BAK1Q16611 211 aa11.62□□□□□ -0.55
CLDND1-211ENST00000506575 TMEM231Q9H6L2 316 aa11.62□□□□□ -0.55
CLDND1-211ENST00000506575 ZFAND3Q9H8U3 227 aa11.62□□□□□ -0.55
CLDND1-211ENST00000506575 RETNQ9HD89 108 aa11.62□□□□□ -0.55
CLDND1-211ENST00000506575 U3KQ87 197 aa11.62□□□□□ -0.55
CLDND1-211ENST00000506575 DNAH7Q8WXX0 4024 aa11.62□□□□□ -0.55
CLDND1-211ENST00000506575 KMT2CQ8NEZ4 4911 aaKnown RBP11.61□□□□□ -0.55
CLDND1-211ENST00000506575 IGKV3-7A0A075B6H7 116 aa11.61□□□□□ -0.55
CLDND1-211ENST00000506575 SFT2D2O95562 160 aa11.61□□□□□ -0.55
CLDND1-211ENST00000506575 LYL1P12980 280 aa11.61□□□□□ -0.55
CLDND1-211ENST00000506575 NPPCP23582 126 aa11.61□□□□□ -0.55
CLDND1-211ENST00000506575 TFPI2P48307 235 aa11.61□□□□□ -0.55
CLDND1-211ENST00000506575 RND2P52198 227 aa11.61□□□□□ -0.55
CLDND1-211ENST00000506575 PAFAH1B2P68402 229 aa11.61□□□□□ -0.55
CLDND1-211ENST00000506575 PPP1R1AQ13522 171 aa11.61□□□□□ -0.55
CLDND1-211ENST00000506575 TIGITQ495A1 244 aa11.61□□□□□ -0.55
CLDND1-211ENST00000506575 PRSS54Q6PEW0 395 aa11.61□□□□□ -0.55
CLDND1-211ENST00000506575 LRTM2Q8N967 370 aa11.61□□□□□ -0.55
CLDND1-211ENST00000506575 NARS2Q96I59 477 aaKnown RBP11.61□□□□□ -0.55
CLDND1-211ENST00000506575 LINC00854A0A1B0GVQ3 168 aa11.6□□□□□ -0.55
CLDND1-211ENST00000506575 A0A1W2PS18 150 aa11.6□□□□□ -0.55
CLDND1-211ENST00000506575 IFNA4P05014 189 aa11.6□□□□□ -0.55
CLDND1-211ENST00000506575 OR10J1P30954 320 aa11.6□□□□□ -0.55
CLDND1-211ENST00000506575 CMC4P56277 68 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 184.7 ms