RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 SLC24A4Q8NFF2 622 aa13.44□□□□□ -0.26
SMN1-204ENST00000506163 OR52B4Q8NGK2 314 aa13.44□□□□□ -0.26
SMN1-204ENST00000506163 OR1S1Q8NH92 325 aa13.44□□□□□ -0.26
SMN1-204ENST00000506163 WDR89Q96FK6 387 aaPredicted RBP13.44□□□□□ -0.26
SMN1-204ENST00000506163 TMED3Q9Y3Q3 217 aa13.44□□□□□ -0.26
SMN1-204ENST00000506163 SMAD5-AS1Q9Y6J3 95 aa13.44□□□□□ -0.26
SMN1-204ENST00000506163 NUPL2O15504 423 aaKnown RBP13.43□□□□□ -0.26
SMN1-204ENST00000506163 TCRBP04435 133 aa13.43□□□□□ -0.26
SMN1-204ENST00000506163 SLC25A6P12236 298 aa13.43□□□□□ -0.26
SMN1-204ENST00000506163 ELLP55199 621 aaPredicted RBP13.43□□□□□ -0.26
SMN1-204ENST00000506163 LCN12Q6JVE5 192 aa13.43□□□□□ -0.26
SMN1-204ENST00000506163 DUSP18Q8NEJ0 188 aa13.43□□□□□ -0.26
SMN1-204ENST00000506163 OR2K2Q8NGT1 345 aa13.43□□□□□ -0.26
SMN1-204ENST00000506163 DTD1Q8TEA8 209 aa13.43□□□□□ -0.26
SMN1-204ENST00000506163 DYNLRB2Q8TF09 96 aa13.43□□□□□ -0.26
SMN1-204ENST00000506163 C20orf85Q9H1P6 137 aa13.43□□□□□ -0.26
SMN1-204ENST00000506163 GAR1Q9NY12 217 aaKnown RBP13.43□□□□□ -0.26
SMN1-204ENST00000506163 TECRQ9NZ01 308 aaKnown RBP13.43□□□□□ -0.26
SMN1-204ENST00000506163 UFC1Q9Y3C8 167 aa13.43□□□□□ -0.26
SMN1-204ENST00000506163 CORTO00230 105 aa13.42□□□□□ -0.26
SMN1-204ENST00000506163 GNG7O60262 68 aa13.42□□□□□ -0.26
SMN1-204ENST00000506163 OPRK1P41145 380 aa13.42□□□□□ -0.26
SMN1-204ENST00000506163 NPBWR1P48145 328 aa13.42□□□□□ -0.26
SMN1-204ENST00000506163 BTNL8Q6UX41 500 aa13.42□□□□□ -0.26
SMN1-204ENST00000506163 TMEM61Q8N0U2 210 aa13.42□□□□□ -0.26
SMN1-204ENST00000506163 OR4X1Q8NH49 305 aa13.42□□□□□ -0.26
SMN1-204ENST00000506163 C20orf24Q9BUV8 137 aa13.42□□□□□ -0.26
SMN1-204ENST00000506163 HIPK2Q9H2X6 1198 aa13.42□□□□□ -0.26
SMN1-204ENST00000506163 PALMDQ9NP74 551 aa13.42□□□□□ -0.26
SMN1-204ENST00000506163 MRPL27Q9P0M9 148 aaKnown RBP13.42□□□□□ -0.26
SMN1-204ENST00000506163 TRAV6A0A075B6T7 132 aa13.41□□□□□ -0.26
SMN1-204ENST00000506163 NPY1RP25929 384 aa13.41□□□□□ -0.26
SMN1-204ENST00000506163 C4orf46Q504U0 113 aa13.41□□□□□ -0.26
SMN1-204ENST00000506163 PRSS54Q6PEW0 395 aa13.41□□□□□ -0.26
SMN1-204ENST00000506163 OR10C1Q96KK4 312 aa13.41□□□□□ -0.26
SMN1-204ENST00000506163 ASCL2Q99929 193 aa13.41□□□□□ -0.26
SMN1-204ENST00000506163 MAGT1Q9H0U3 335 aa13.41□□□□□ -0.26
SMN1-204ENST00000506163 DAZ1Q9NQZ3 744 aaKnown RBP13.41□□□□□ -0.26
SMN1-204ENST00000506163 CACFD1Q9UGQ2 172 aa13.41□□□□□ -0.26
SMN1-204ENST00000506163 PIGBOS1A0A0B4J2F0 54 aa13.4□□□□□ -0.26
SMN1-204ENST00000506163 K7EMT4 169 aa13.4□□□□□ -0.26
SMN1-204ENST00000506163 CLN5O75503 358 aa13.4□□□□□ -0.26
SMN1-204ENST00000506163 IGKV1-17P01599 117 aa13.4□□□□□ -0.26
SMN1-204ENST00000506163 IAPPP10997 89 aa13.4□□□□□ -0.26
SMN1-204ENST00000506163 RELQ04864 619 aaPredicted RBP13.4□□□□□ -0.26
SMN1-204ENST00000506163 CD69Q07108 199 aa13.4□□□□□ -0.26
SMN1-204ENST00000506163 ASAH1Q13510 395 aa13.4□□□□□ -0.26
SMN1-204ENST00000506163 DCTN2Q13561 401 aaKnown RBP13.4□□□□□ -0.26
SMN1-204ENST00000506163 ZNF846Q147U1 533 aa13.4□□□□□ -0.26
SMN1-204ENST00000506163 TOMM20LQ6UXN7 152 aa13.4□□□□□ -0.26
SMN1-204ENST00000506163 RNASEH2CQ8TDP1 164 aaKnown RBP13.4□□□□□ -0.26
SMN1-204ENST00000506163 MARC2Q969Z3 335 aa13.4□□□□□ -0.26
SMN1-204ENST00000506163 NUDT15Q9NV35 164 aa13.4□□□□□ -0.26
SMN1-204ENST00000506163 U3KQ87 197 aa13.4□□□□□ -0.26
SMN1-204ENST00000506163 C15orf62A8K5M9 175 aa13.39□□□□□ -0.27
SMN1-204ENST00000506163 UPK1BO75841 260 aa13.39□□□□□ -0.27
SMN1-204ENST00000506163 YIF1AO95070 293 aa13.39□□□□□ -0.27
SMN1-204ENST00000506163 IFNA10P01566 189 aa13.39□□□□□ -0.27
SMN1-204ENST00000506163 CD7P09564 240 aa13.39□□□□□ -0.27
SMN1-204ENST00000506163 FRMD6-AS1P0C7T7 363 aa13.39□□□□□ -0.27
SMN1-204ENST00000506163 IGHV4-30-4P0DP06 118 aa13.39□□□□□ -0.27
SMN1-204ENST00000506163 MITD1Q8WV92 249 aa13.39□□□□□ -0.27
SMN1-204ENST00000506163 WDR12Q9GZL7 423 aaKnown RBP13.39□□□□□ -0.27
SMN1-204ENST00000506163 ZFAND3Q9H8U3 227 aa13.39□□□□□ -0.27
SMN1-204ENST00000506163 C19orf73Q9NVV2 129 aa13.39□□□□□ -0.27
SMN1-204ENST00000506163 IGHV3-49A0A0A0MS15 119 aa13.39□□□□□ -0.27
SMN1-204ENST00000506163 FAM90A26D6RGX4 464 aa13.39□□□□□ -0.27
SMN1-204ENST00000506163 SCAF4O95104 1147 aaKnown RBP13.39□□□□□ -0.27
SMN1-204ENST00000506163 GUCA2BQ16661 112 aa13.39□□□□□ -0.27
SMN1-204ENST00000506163 TIGITQ495A1 244 aa13.39□□□□□ -0.27
SMN1-204ENST00000506163 SBSPONQ8IVN8 264 aa13.39□□□□□ -0.27
SMN1-204ENST00000506163 COQ8AQ8NI60 647 aa13.39□□□□□ -0.27
SMN1-204ENST00000506163 SEC22CQ9BRL7 303 aa13.39□□□□□ -0.27
SMN1-204ENST00000506163 SMPXQ9UHP9 88 aa13.39□□□□□ -0.27
SMN1-204ENST00000506163 HUWE1Q7Z6Z7 4374 aaKnown RBP13.38□□□□□ -0.27
SMN1-204ENST00000506163 RND2P52198 227 aa13.38□□□□□ -0.27
SMN1-204ENST00000506163 ID3Q02535 119 aa13.38□□□□□ -0.27
SMN1-204ENST00000506163 ZNF600Q6ZNG1 722 aa13.38□□□□□ -0.27
SMN1-204ENST00000506163 LILRB2Q8N423 598 aa13.38□□□□□ -0.27
SMN1-204ENST00000506163 TMEM116Q8NCL8 245 aa13.38□□□□□ -0.27
SMN1-204ENST00000506163 OR4D5Q8NGN0 318 aa13.38□□□□□ -0.27
SMN1-204ENST00000506163 WFDC10AQ9H1F0 79 aa13.38□□□□□ -0.27
SMN1-204ENST00000506163 PUS1Q9Y606 427 aaKnown RBP eCLIP13.38□□□□□ -0.27
SMN1-204ENST00000506163 IGHV3OR16-13A0A075B7E8 117 aa13.37□□□□□ -0.27
SMN1-204ENST00000506163 IGHV3-74A0A0B4J1X5 117 aa13.37□□□□□ -0.27
SMN1-204ENST00000506163 IGHV7-4-1A0A0J9YVY3 117 aa13.37□□□□□ -0.27
SMN1-204ENST00000506163 FAM240BA0A1B0GVZ2 78 aa13.37□□□□□ -0.27
SMN1-204ENST00000506163 CHEK1O14757 476 aa13.37□□□□□ -0.27
SMN1-204ENST00000506163 APOHP02749 345 aaPredicted RBP13.37□□□□□ -0.27
SMN1-204ENST00000506163 IGLC1P0CG04 106 aa13.37□□□□□ -0.27
SMN1-204ENST00000506163 NPIPB3Q92617 1050 aa13.37□□□□□ -0.27
SMN1-204ENST00000506163 RPS10-NUDT3A0A1W2PQS6 291 aa13.36□□□□□ -0.27
SMN1-204ENST00000506163 A8MZ25 164 aa13.36□□□□□ -0.27
SMN1-204ENST00000506163 SYNGR2O43760 224 aa13.36□□□□□ -0.27
SMN1-204ENST00000506163 H2AFB2P0C5Z0 115 aa13.36□□□□□ -0.27
SMN1-204ENST00000506163 SLC25A4P12235 298 aa13.36□□□□□ -0.27
SMN1-204ENST00000506163 CD81P60033 236 aa13.36□□□□□ -0.27
SMN1-204ENST00000506163 POLR2GP62487 172 aaKnown RBP eCLIP13.36□□□□□ -0.27
SMN1-204ENST00000506163 RNF2Q99496 336 aa13.36□□□□□ -0.27
SMN1-204ENST00000506163 NEURL2Q9BR09 285 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 206.6 ms