RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 EIF3IQ13347 325 aaKnown RBP2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 DEFB134Q4QY38 66 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 COMMD7Q86VX2 200 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 Q8NAQ8 132 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 Q8WTZ3 238 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 DYDC1Q8WWB3 177 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 PATE1Q8WXA2 126 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 CARHSP1Q9Y2V2 147 aaKnown RBP2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 PCNX1Q96RV3 2341 aa2.81□□□□□ -1.96
HMGB1P3-201ENST00000502802 MAP1AP78559 2803 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 C5orf49A4QMS7 147 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 SYNGR2O43760 224 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 NSA2O95478 260 aaKnown RBP2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 IL3P08700 152 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 CD36P16671 472 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 MYL12AP19105 171 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 DDTP30046 118 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 OPRM1P35372 400 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 RAP1GDS1P52306 607 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 MAXP61244 160 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 HLA-DRB3P79483 266 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 IMPG1Q17R60 797 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 LPCAT4Q643R3 524 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 RASSF6Q6ZTQ3 369 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 ZNF567Q8N184 647 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 OR5P3Q8WZ94 311 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 RAD51AP1Q96B01 352 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 IGF2BP2-AS1Q96M15 143 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 HES4Q9HCC6 221 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 BATF3Q9NR55 127 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 C3orf18Q9UK00 162 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 DKKL1Q9UK85 242 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 GUCA1BQ9UMX6 200 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 PCYT1BQ9Y5K3 369 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 APCP25054 2843 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 UNC79Q9P2D8 2635 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 MYO7BQ6PIF6 2116 aa2.8□□□□□ -1.96
HMGB1P3-201ENST00000502802 ADGRG4Q8IZF6 3080 aa2.79□□□□□ -1.96
HMGB1P3-201ENST00000502802 A0A087X0T9 212 aa2.79□□□□□ -1.96
HMGB1P3-201ENST00000502802 EFCAB10A6NFE3 127 aa2.79□□□□□ -1.96
HMGB1P3-201ENST00000502802 A8MWP6 167 aa2.79□□□□□ -1.96
HMGB1P3-201ENST00000502802 M0R036 132 aa2.79□□□□□ -1.96
HMGB1P3-201ENST00000502802 MFSD11O43934 449 aa2.79□□□□□ -1.96
HMGB1P3-201ENST00000502802 FAM228BP0C875 321 aa2.79□□□□□ -1.96
HMGB1P3-201ENST00000502802 OR10J1P30954 320 aa2.79□□□□□ -1.96
HMGB1P3-201ENST00000502802 FGF12P61328 243 aa2.79□□□□□ -1.96
HMGB1P3-201ENST00000502802 BAMBIQ13145 260 aa2.79□□□□□ -1.96
HMGB1P3-201ENST00000502802 CLVS2Q5SYC1 327 aa2.79□□□□□ -1.96
HMGB1P3-201ENST00000502802 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P3-201ENST00000502802 C1orf195Q5TG92 126 aa2.79□□□□□ -1.96
HMGB1P3-201ENST00000502802 NCBP2-AS2Q69YL0 99 aa2.79□□□□□ -1.96
HMGB1P3-201ENST00000502802 PPP1R2P3Q6NXS1 205 aa2.79□□□□□ -1.96
HMGB1P3-201ENST00000502802 LYPD6Q86Y78 171 aa2.79□□□□□ -1.96
HMGB1P3-201ENST00000502802 MFSD8Q8NHS3 518 aa2.79□□□□□ -1.96
HMGB1P3-201ENST00000502802 COX14Q96I36 57 aa2.79□□□□□ -1.96
HMGB1P3-201ENST00000502802 ALG5Q9Y673 324 aa2.79□□□□□ -1.96
HMGB1P3-201ENST00000502802 SCN3AQ9NY46 2000 aa2.79□□□□□ -1.96
HMGB1P3-201ENST00000502802 PRR14LQ5THK1 2151 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 NOTCH2Q04721 2471 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 CREBBPQ92793 2442 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 IGKV2-24A0A0C4DH68 120 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 PSCAO43653 123 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 DCTN3O75935 186 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 HLA-DQB2P05538 268 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 SERPINA6P08185 405 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 CD7P09564 240 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 ALDH3A1P30838 453 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 CA7P43166 264 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 SPINT3P49223 89 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 DAPP51397 102 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 MRPS25P82663 173 aaKnown RBP2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 GLO1Q04760 184 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 STX5Q13190 355 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 CCDC58Q4VC31 144 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 ACSM3Q53FZ2 586 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 PYDC2Q56P42 97 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 SCXQ7RTU7 201 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 GPR32P1Q8NGA4 272 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 CMTM2Q8TAZ6 248 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 PYDC1Q8WXC3 89 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 LYSMD1Q96S90 227 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 TBX5Q99593 518 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 DDA1Q9BW61 102 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 C1QTNF6Q9BXI9 259 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 V9GYQ6 96 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 POLEQ07864 2286 aa2.78□□□□□ -1.96
HMGB1P3-201ENST00000502802 EML6Q6ZMW3 1958 aa2.78□□□□□ -1.97
HMGB1P3-201ENST00000502802 DOPEY1Q5JWR5 2465 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 PDZD2O15018 2839 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 AKAP9Q99996 3911 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 LOC105371267A0A1B0GV96 52 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 IGSF23A1L1A6 192 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 E5RI56 91 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 M0R381 172 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 KCNK1O00180 336 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 GSTZ1O43708 216 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 PROSCO94903 275 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 IGLV6-57P01721 117 aa2.77□□□□□ -1.97
HMGB1P3-201ENST00000502802 CRYGDP07320 174 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms