RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 H2BFWTQ7Z2G1 175 aa9.97□□□□□ -0.81
CCDC58-207ENST00000498466 DIABLOQ9NR28 239 aa9.97□□□□□ -0.81
CCDC58-207ENST00000498466 XCL2Q9UBD3 114 aa9.97□□□□□ -0.81
CCDC58-207ENST00000498466 BLOC1S6Q9UL45 172 aa9.97□□□□□ -0.81
CCDC58-207ENST00000498466 HELTA6NFD8 242 aa9.96□□□□□ -0.82
CCDC58-207ENST00000498466 CDK2AP2O75956 126 aa9.96□□□□□ -0.82
CCDC58-207ENST00000498466 PMP2P02689 132 aa9.96□□□□□ -0.82
CCDC58-207ENST00000498466 SPART-AS1P0CW21 52 aa9.96□□□□□ -0.82
CCDC58-207ENST00000498466 CRYBB3P26998 211 aa9.96□□□□□ -0.82
CCDC58-207ENST00000498466 SNCAP37840 140 aa9.96□□□□□ -0.82
CCDC58-207ENST00000498466 EIF2B2P49770 351 aaKnown RBP9.96□□□□□ -0.82
CCDC58-207ENST00000498466 PPP5CP53041 499 aa9.96□□□□□ -0.82
CCDC58-207ENST00000498466 SCAND1P57086 179 aa9.96□□□□□ -0.82
CCDC58-207ENST00000498466 HSPE1P61604 102 aaKnown RBP9.96□□□□□ -0.82
CCDC58-207ENST00000498466 MXD1Q05195 221 aa9.96□□□□□ -0.82
CCDC58-207ENST00000498466 DHRS2Q13268 280 aa9.96□□□□□ -0.82
CCDC58-207ENST00000498466 KCTD21Q4G0X4 260 aa9.96□□□□□ -0.82
CCDC58-207ENST00000498466 PHLDA2Q53GA4 152 aa9.96□□□□□ -0.82
CCDC58-207ENST00000498466 SPINK9Q5DT21 86 aa9.96□□□□□ -0.82
CCDC58-207ENST00000498466 IDNKQ5T6J7 187 aa9.96□□□□□ -0.82
CCDC58-207ENST00000498466 TMEM230Q96A57 120 aa9.96□□□□□ -0.82
CCDC58-207ENST00000498466 FXYD6Q9H0Q3 95 aa9.96□□□□□ -0.82
CCDC58-207ENST00000498466 AGRNO00468 2067 aa9.95□□□□□ -0.82
CCDC58-207ENST00000498466 SDC2P34741 201 aa9.95□□□□□ -0.82
CCDC58-207ENST00000498466 RNF212Q495C1 297 aa9.95□□□□□ -0.82
CCDC58-207ENST00000498466 SEC22AQ96IW7 307 aa9.95□□□□□ -0.82
CCDC58-207ENST00000498466 FAM210BQ96KR6 192 aa9.95□□□□□ -0.82
CCDC58-207ENST00000498466 SSR3Q9UNL2 185 aa9.95□□□□□ -0.82
CCDC58-207ENST00000498466 SCGB2A1O75556 95 aa9.94□□□□□ -0.82
CCDC58-207ENST00000498466 CLEC2LP0C7M8 214 aa9.94□□□□□ -0.82
CCDC58-207ENST00000498466 PSMB9P28065 219 aa9.94□□□□□ -0.82
CCDC58-207ENST00000498466 S100GP29377 79 aa9.94□□□□□ -0.82
CCDC58-207ENST00000498466 OR5H2Q8NGV7 314 aa9.94□□□□□ -0.82
CCDC58-207ENST00000498466 OR6F1Q8NGZ6 308 aa9.94□□□□□ -0.82
CCDC58-207ENST00000498466 NRG4Q8WWG1 115 aa9.94□□□□□ -0.82
CCDC58-207ENST00000498466 MRGPRFQ96AM1 343 aa9.94□□□□□ -0.82
CCDC58-207ENST00000498466 CNBD2Q96M20 576 aa9.94□□□□□ -0.82
CCDC58-207ENST00000498466 FAM212BQ9NTI7 297 aaPredicted RBP9.94□□□□□ -0.82
CCDC58-207ENST00000498466 HERC1Q15751 4861 aa9.94□□□□□ -0.82
CCDC58-207ENST00000498466 TMEM189A5PLL7 270 aa9.93□□□□□ -0.82
CCDC58-207ENST00000498466 CORTO00230 105 aa9.93□□□□□ -0.82
CCDC58-207ENST00000498466 CLN5O75503 358 aa9.93□□□□□ -0.82
CCDC58-207ENST00000498466 IGKV1-39P01597 117 aa9.93□□□□□ -0.82
CCDC58-207ENST00000498466 IGKV1D-39P04432 117 aa9.93□□□□□ -0.82
CCDC58-207ENST00000498466 HTN3P15516 51 aa9.93□□□□□ -0.82
CCDC58-207ENST00000498466 TAS2R46P59540 309 aa9.93□□□□□ -0.82
CCDC58-207ENST00000498466 SNRPD3P62318 126 aaKnown RBP9.93□□□□□ -0.82
CCDC58-207ENST00000498466 TBC1D26Q86UD7 250 aa9.93□□□□□ -0.82
CCDC58-207ENST00000498466 SLC35G3Q8N808 338 aa9.93□□□□□ -0.82
CCDC58-207ENST00000498466 APOBP04114 4563 aaKnown RBP9.92□□□□□ -0.82
CCDC58-207ENST00000498466 IGHV3OR16-12A0A075B7B8 117 aa9.92□□□□□ -0.82
CCDC58-207ENST00000498466 H3BMM0 161 aa9.92□□□□□ -0.82
CCDC58-207ENST00000498466 OPRK1P41145 380 aa9.92□□□□□ -0.82
CCDC58-207ENST00000498466 AP2S1P53680 142 aaPredicted RBP9.92□□□□□ -0.82
CCDC58-207ENST00000498466 SUB1P53999 127 aaKnown RBP eCLIP9.92□□□□□ -0.82
CCDC58-207ENST00000498466 TNP2Q05952 138 aa9.92□□□□□ -0.82
CCDC58-207ENST00000498466 IZUMO4Q1ZYL8 232 aa9.92□□□□□ -0.82
CCDC58-207ENST00000498466 ZNF705AQ6ZN79 300 aaPredicted RBP9.92□□□□□ -0.82
CCDC58-207ENST00000498466 NEU1Q99519 415 aa9.92□□□□□ -0.82
CCDC58-207ENST00000498466 NIPSNAP3BQ9BS92 247 aa9.92□□□□□ -0.82
CCDC58-207ENST00000498466 MRPL36Q9P0J6 103 aaKnown RBP9.92□□□□□ -0.82
CCDC58-207ENST00000498466 SMIM9A6NGZ8 99 aa9.91□□□□□ -0.82
CCDC58-207ENST00000498466 TIGITQ495A1 244 aa9.91□□□□□ -0.82
CCDC58-207ENST00000498466 FAM222AQ5U5X8 452 aa9.91□□□□□ -0.82
CCDC58-207ENST00000498466 LPCAT3Q6P1A2 487 aa9.91□□□□□ -0.82
CCDC58-207ENST00000498466 C16orf54Q6UWD8 224 aa9.91□□□□□ -0.82
CCDC58-207ENST00000498466 OR4X1Q8NH49 305 aa9.91□□□□□ -0.82
CCDC58-207ENST00000498466 FNDC4Q9H6D8 234 aaPredicted RBP9.91□□□□□ -0.82
CCDC58-207ENST00000498466 RNF167Q9H6Y7 350 aa9.91□□□□□ -0.82
CCDC58-207ENST00000498466 DKK2Q9UBU2 259 aa9.91□□□□□ -0.82
CCDC58-207ENST00000498466 ANAPC10Q9UM13 185 aa9.91□□□□□ -0.82
CCDC58-207ENST00000498466 RFNGQ9Y644 331 aa9.91□□□□□ -0.82
CCDC58-207ENST00000498466 DNAH5Q8TE73 4624 aa9.91□□□□□ -0.82
CCDC58-207ENST00000498466 TEX48A0A1B0GUV7 120 aa9.9□□□□□ -0.82
CCDC58-207ENST00000498466 ZNF705FA8MVS1 300 aaPredicted RBP9.9□□□□□ -0.82
CCDC58-207ENST00000498466 FAM90A26D6RGX4 464 aa9.9□□□□□ -0.82
CCDC58-207ENST00000498466 HNRNPCP07910 306 aaKnown RBP eCLIP9.9□□□□□ -0.82
CCDC58-207ENST00000498466 ZNF705DP0CH99 300 aaPredicted RBP9.9□□□□□ -0.82
CCDC58-207ENST00000498466 ZNF705BP0CI00 300 aaPredicted RBP9.9□□□□□ -0.82
CCDC58-207ENST00000498466 RNASE2P10153 161 aaKnown RBP9.9□□□□□ -0.82
CCDC58-207ENST00000498466 HRH1P35367 487 aa9.9□□□□□ -0.82
CCDC58-207ENST00000498466 HOXA1P49639 335 aaPredicted RBP9.9□□□□□ -0.82
CCDC58-207ENST00000498466 TSPAN5P62079 268 aa9.9□□□□□ -0.82
CCDC58-207ENST00000498466 MLANAQ16655 118 aa9.9□□□□□ -0.82
CCDC58-207ENST00000498466 GLMPQ8WWB7 406 aa9.9□□□□□ -0.82
CCDC58-207ENST00000498466 S100A16Q96FQ6 103 aaKnown RBP9.9□□□□□ -0.82
CCDC58-207ENST00000498466 PDCD10Q9BUL8 212 aa9.9□□□□□ -0.82
CCDC58-207ENST00000498466 TMED3Q9Y3Q3 217 aa9.9□□□□□ -0.82
CCDC58-207ENST00000498466 U3KQE9 123 aa9.9□□□□□ -0.82
CCDC58-207ENST00000498466 TRAV30A0A087WSZ9 112 aa9.89□□□□□ -0.83
CCDC58-207ENST00000498466 LOC100506127A0A0U1RQW1 187 aa9.89□□□□□ -0.83
CCDC58-207ENST00000498466 INS-IGF2F8WCM5 200 aa9.89□□□□□ -0.83
CCDC58-207ENST00000498466 IGKV1-17P01599 117 aa9.89□□□□□ -0.83
CCDC58-207ENST00000498466 IGKV3-20P01619 116 aa9.89□□□□□ -0.83
CCDC58-207ENST00000498466 HLA-DRB4P13762 266 aa9.89□□□□□ -0.83
CCDC58-207ENST00000498466 NAT1P18440 290 aa9.89□□□□□ -0.83
CCDC58-207ENST00000498466 HLA-DMAP28067 261 aa9.89□□□□□ -0.83
CCDC58-207ENST00000498466 FXYD7P58549 80 aa9.89□□□□□ -0.83
CCDC58-207ENST00000498466 TMEM69Q5SWH9 247 aa9.89□□□□□ -0.83
CCDC58-207ENST00000498466 TMEM88Q6PEY1 159 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms