RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 PPP1R2P9O14990 202 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 NBR2O15453 112 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 COX7A2P2O60397 106 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 PAGE4O60829 102 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 FCN3O75636 299 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 VENTXO95231 258 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 CNIH1O95406 144 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 MOSP00540 346 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 IGKV1D-33P01593 117 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 IGKV1-33P01594 117 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 IGLV2-23P01705 113 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 IGHV2-5P01817 119 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 S100A6P06703 90 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 STAG3L2P0CL84 134 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 STAG3L3P0CL85 134 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 ARL14EPLP0DKL9 152 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 FOLR2P14207 255 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 IGFBP2P18065 325 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 S100A7P31151 101 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 BRS3P32247 399 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 GNB1P62873 340 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 RPL19P84098 196 aaKnown RBP5.58□□□□□ -1.52
USP39-219ENST00000496047 HES1Q14469 280 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 PSG5Q15238 335 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 PRSS8Q16651 343 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 TMEM241Q24JQ0 296 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 ZNF674Q2M3X9 581 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 UTF1Q5T230 341 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 FAM78BQ5VT40 261 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 CST9LP1Q5W188 147 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 SPNS3Q6ZMD2 512 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 CYP2G1PQ6ZSU1 146 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 PPP1R27Q86WC6 154 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 GATAD1Q8WUU5 269 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 MISP3Q96FF7 219 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 ACY3Q96HD9 319 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 CCL19Q99731 98 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 LPAR2Q9HBW0 351 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 C1RLQ9NZP8 487 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 FUT9Q9Y231 359 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 ABCA2Q9BZC7 2435 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 MGAQ8IWI9 3026 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 IGHV3-72A0A0B4J1Y9 119 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 IGHV2-70DA0A0C4DH43 119 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 MDFIC2A0A1B0GVS7 189 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 A0A1W2PPI3 338 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 TCRBV4S1A1TA0A5B7 111 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 C22orf46C9J442 243 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 OR7C2O60412 319 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 TOX4O94842 621 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 DEFA4P12838 97 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 OR10J1P30954 320 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 ADIRFQ15847 76 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 FAM90A2PQ658T7 463 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 SP5Q6BEB4 398 aaPredicted RBP5.57□□□□□ -1.52
USP39-219ENST00000496047 KCNIP4Q6PIL6 250 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 CLEC2AQ6UVW9 174 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 SSX7Q7RTT5 188 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 VMO1Q7Z5L0 202 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 C11orf42Q8N5U0 333 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 STXBP6Q8NFX7 210 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 OR1P1Q8NH06 330 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 SRSF12Q8WXF0 261 aaKnown RBP5.57□□□□□ -1.52
USP39-219ENST00000496047 TMEM190Q8WZ59 177 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 RPUSD4Q96CM3 377 aaKnown RBP5.57□□□□□ -1.52
USP39-219ENST00000496047 PERPQ96FX8 193 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 CCDC140Q96MF4 163 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 PARLQ9H300 379 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 SDF2L1Q9HCN8 221 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 BIN3Q9NQY0 253 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 TMEM242Q9NWH2 141 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 RNF24Q9Y225 148 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 SIGLEC9Q9Y336 463 aa5.57□□□□□ -1.52
USP39-219ENST00000496047 KLF2Q9Y5W3 355 aaPredicted RBP5.57□□□□□ -1.52
USP39-219ENST00000496047 USP9YO00507 2555 aaPredicted RBP5.56□□□□□ -1.52
USP39-219ENST00000496047 NF1P21359 2839 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 TRAV20A0A0B4J274 112 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 ODF3BA8MYP8 253 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 H7BYZ3 331 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 TIMM23O14925 209 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 LY6HO94772 140 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 YIF1AO95070 293 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 OR5G3P0C626 314 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 LINC00869P0C866 280 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 C8orf88P0DMB2 117 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 MYOD1P15172 320 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 FOSL1P15407 271 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 GCHFRP30047 84 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 UBE2G2P60604 165 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 PAX2Q02962 417 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 DIAPH2-AS1Q14236 149 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 GAMTQ14353 236 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 C10orf113Q5VZT2 155 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 THAP8Q8NA92 274 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 OR10W1Q8NGF6 305 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 TMEM170AQ8WVE7 144 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 FAM168AQ92567 244 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 FBXL15Q9H469 300 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 THYN1Q9P016 225 aa5.56□□□□□ -1.52
USP39-219ENST00000496047 HILPDAQ9Y5L2 63 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms