RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 PRAF2O60831 178 aa14.81□□□□□ -0.04
HDAC4-212ENST00000495497 CSN3P07498 182 aa14.81□□□□□ -0.04
HDAC4-212ENST00000495497 UNQ9165/PRO28630Q6UXU0 137 aa14.81□□□□□ -0.04
HDAC4-212ENST00000495497 OR4C12Q96R67 309 aa14.81□□□□□ -0.04
HDAC4-212ENST00000495497 TXN2Q99757 166 aa14.81□□□□□ -0.04
HDAC4-212ENST00000495497 ELOVL1Q9BW60 279 aa14.81□□□□□ -0.04
HDAC4-212ENST00000495497 GPR61Q9BZJ8 451 aa14.81□□□□□ -0.04
HDAC4-212ENST00000495497 PAIP2BQ9ULR5 123 aaKnown RBP14.81□□□□□ -0.04
HDAC4-212ENST00000495497 C15orf62A8K5M9 175 aa14.8□□□□□ -0.04
HDAC4-212ENST00000495497 SNRPGP15A8MWD9 76 aa14.8□□□□□ -0.04
HDAC4-212ENST00000495497 SSSCA1O60232 199 aa14.8□□□□□ -0.04
HDAC4-212ENST00000495497 GNG7O60262 68 aa14.8□□□□□ -0.04
HDAC4-212ENST00000495497 PTTG1O95997 202 aa14.8□□□□□ -0.04
HDAC4-212ENST00000495497 FCGR2BP31994 310 aaPredicted RBP14.8□□□□□ -0.04
HDAC4-212ENST00000495497 FAM106AQ4KMX7 169 aa14.8□□□□□ -0.04
HDAC4-212ENST00000495497 RNASEH2CQ8TDP1 164 aaKnown RBP14.8□□□□□ -0.04
HDAC4-212ENST00000495497 ZNF414Q96IQ9 312 aa14.8□□□□□ -0.04
HDAC4-212ENST00000495497 ATP6V0BQ99437 205 aa14.8□□□□□ -0.04
HDAC4-212ENST00000495497 PALMDQ9NP74 551 aa14.8□□□□□ -0.04
HDAC4-212ENST00000495497 IGHV3OR16-8A0A075B7F1 116 aa14.79□□□□□ -0.04
HDAC4-212ENST00000495497 H3BP45 60 aa14.79□□□□□ -0.04
HDAC4-212ENST00000495497 WIPF1O43516 503 aa14.79□□□□□ -0.04
HDAC4-212ENST00000495497 SIX6O95475 246 aa14.79□□□□□ -0.04
HDAC4-212ENST00000495497 MBPP02686 304 aaPredicted RBP14.79□□□□□ -0.04
HDAC4-212ENST00000495497 IFNA4P05014 189 aa14.79□□□□□ -0.04
HDAC4-212ENST00000495497 NPBWR1P48145 328 aa14.79□□□□□ -0.04
HDAC4-212ENST00000495497 EGFEM1PQ0D2K5 195 aa14.79□□□□□ -0.04
HDAC4-212ENST00000495497 SPSB3Q6PJ21 355 aa14.79□□□□□ -0.04
HDAC4-212ENST00000495497 ADAMTSL5Q6ZMM2 481 aa14.79□□□□□ -0.04
HDAC4-212ENST00000495497 REC114Q7Z4M0 266 aa14.79□□□□□ -0.04
HDAC4-212ENST00000495497 NOXA1Q86UR1 476 aa14.79□□□□□ -0.04
HDAC4-212ENST00000495497 CIB3Q96Q77 187 aaPredicted RBP14.79□□□□□ -0.04
HDAC4-212ENST00000495497 ZNF436Q9C0F3 470 aaPredicted RBP14.79□□□□□ -0.04
HDAC4-212ENST00000495497 PEMTQ9UBM1 199 aa14.79□□□□□ -0.04
HDAC4-212ENST00000495497 NOTCH1P46531 2555 aa14.78□□□□□ -0.04
HDAC4-212ENST00000495497 RPS10-NUDT3A0A1W2PQS6 291 aa14.78□□□□□ -0.04
HDAC4-212ENST00000495497 LGALS9O00182 355 aa14.78□□□□□ -0.04
HDAC4-212ENST00000495497 GOSR2O14653 212 aa14.78□□□□□ -0.04
HDAC4-212ENST00000495497 NUPL2O15504 423 aaKnown RBP14.78□□□□□ -0.04
HDAC4-212ENST00000495497 TMEM50AO95807 157 aa14.78□□□□□ -0.04
HDAC4-212ENST00000495497 INSL3P51460 131 aa14.78□□□□□ -0.04
HDAC4-212ENST00000495497 DCTN2Q13561 401 aaKnown RBP14.78□□□□□ -0.04
HDAC4-212ENST00000495497 TM4SF20Q53R12 229 aa14.78□□□□□ -0.04
HDAC4-212ENST00000495497 SPANXN5Q5MJ07 72 aa14.78□□□□□ -0.04
HDAC4-212ENST00000495497 PRSS54Q6PEW0 395 aa14.78□□□□□ -0.04
HDAC4-212ENST00000495497 GSG1LQ6UXU4 331 aa14.78□□□□□ -0.04
HDAC4-212ENST00000495497 OR4X1Q8NH49 305 aa14.78□□□□□ -0.04
HDAC4-212ENST00000495497 C2orf50Q96LR7 162 aa14.78□□□□□ -0.04
HDAC4-212ENST00000495497 GAR1Q9NY12 217 aaKnown RBP14.78□□□□□ -0.04
HDAC4-212ENST00000495497 PSENENQ9NZ42 101 aa14.78□□□□□ -0.04
HDAC4-212ENST00000495497 SELENOKQ9Y6D0 94 aa14.78□□□□□ -0.04
HDAC4-212ENST00000495497 C2orf70A6NJV1 201 aa14.77□□□□□ -0.05
HDAC4-212ENST00000495497 CLN5O75503 358 aa14.77□□□□□ -0.05
HDAC4-212ENST00000495497 PAX9P55771 341 aa14.77□□□□□ -0.05
HDAC4-212ENST00000495497 RAB11AP62491 216 aa14.77□□□□□ -0.05
HDAC4-212ENST00000495497 CACNG8Q8WXS5 425 aa14.77□□□□□ -0.05
HDAC4-212ENST00000495497 AURKAIP1Q9NWT8 199 aaPredicted RBP14.77□□□□□ -0.05
HDAC4-212ENST00000495497 RCL1Q9Y2P8 373 aaKnown RBP14.77□□□□□ -0.05
HDAC4-212ENST00000495497 LSM5Q9Y4Y9 91 aaKnown RBP14.77□□□□□ -0.05
HDAC4-212ENST00000495497 NDUFA4O00483 81 aa14.76□□□□□ -0.05
HDAC4-212ENST00000495497 RND2P52198 227 aa14.76□□□□□ -0.05
HDAC4-212ENST00000495497 ATP5IP56385 69 aaPredicted RBP14.76□□□□□ -0.05
HDAC4-212ENST00000495497 CD69Q07108 199 aa14.76□□□□□ -0.05
HDAC4-212ENST00000495497 SLC16A13Q7RTY0 426 aa14.76□□□□□ -0.05
HDAC4-212ENST00000495497 ACY3Q96HD9 319 aa14.76□□□□□ -0.05
HDAC4-212ENST00000495497 MEGF8Q7Z7M0 2845 aa14.75□□□□□ -0.05
HDAC4-212ENST00000495497 TMEM213A2RRL7 107 aa14.75□□□□□ -0.05
HDAC4-212ENST00000495497 ZNF207O43670 478 aaKnown RBP14.75□□□□□ -0.05
HDAC4-212ENST00000495497 SSNA1O43805 119 aa14.75□□□□□ -0.05
HDAC4-212ENST00000495497 IGLV1-51P01701 117 aa14.75□□□□□ -0.05
HDAC4-212ENST00000495497 SLC25A4P12235 298 aa14.75□□□□□ -0.05
HDAC4-212ENST00000495497 FOLR2P14207 255 aa14.75□□□□□ -0.05
HDAC4-212ENST00000495497 RPP30P78346 268 aaKnown RBP14.75□□□□□ -0.05
HDAC4-212ENST00000495497 TIGITQ495A1 244 aa14.75□□□□□ -0.05
HDAC4-212ENST00000495497 ETFRF1Q6IPR1 90 aa14.75□□□□□ -0.05
HDAC4-212ENST00000495497 TMEM190Q8WZ59 177 aa14.75□□□□□ -0.05
HDAC4-212ENST00000495497 NPIPB3Q92617 1050 aa14.75□□□□□ -0.05
HDAC4-212ENST00000495497 SMIM8Q96KF7 97 aa14.75□□□□□ -0.05
HDAC4-212ENST00000495497 C20orf24Q9BUV8 137 aa14.75□□□□□ -0.05
HDAC4-212ENST00000495497 STRAPQ9Y3F4 350 aaKnown RBP14.75□□□□□ -0.05
HDAC4-212ENST00000495497 ALG5Q9Y673 324 aa14.75□□□□□ -0.05
HDAC4-212ENST00000495497 A8MWP6 167 aa14.74□□□□□ -0.05
HDAC4-212ENST00000495497 K7EPK0 472 aa14.74□□□□□ -0.05
HDAC4-212ENST00000495497 CCNKO75909 580 aa14.74□□□□□ -0.05
HDAC4-212ENST00000495497 YIF1AO95070 293 aa14.74□□□□□ -0.05
HDAC4-212ENST00000495497 RELQ04864 619 aaPredicted RBP14.74□□□□□ -0.05
HDAC4-212ENST00000495497 IL15RAQ13261 267 aa14.74□□□□□ -0.05
HDAC4-212ENST00000495497 WDR89Q96FK6 387 aaPredicted RBP14.74□□□□□ -0.05
HDAC4-212ENST00000495497 PRR25Q96S07 402 aa14.74□□□□□ -0.05
HDAC4-212ENST00000495497 WI2-2373I1.2A0A1W2PRP0 233 aa14.73□□□□□ -0.05
HDAC4-212ENST00000495497 C7orf66A4D0T2 115 aa14.73□□□□□ -0.05
HDAC4-212ENST00000495497 PRSS46E5RG02 174 aa14.73□□□□□ -0.05
HDAC4-212ENST00000495497 CBLN1P23435 193 aa14.73□□□□□ -0.05
HDAC4-212ENST00000495497 GPX4P36969 197 aaPredicted RBP14.73□□□□□ -0.05
HDAC4-212ENST00000495497 S100A10P60903 97 aa14.73□□□□□ -0.05
HDAC4-212ENST00000495497 RAB32Q13637 225 aa14.73□□□□□ -0.05
HDAC4-212ENST00000495497 GAMTQ14353 236 aa14.73□□□□□ -0.05
HDAC4-212ENST00000495497 RGS21Q2M5E4 152 aa14.73□□□□□ -0.05
HDAC4-212ENST00000495497 TMEM116Q8NCL8 245 aa14.73□□□□□ -0.05
HDAC4-212ENST00000495497 RAB40CQ96S21 281 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms