RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 FAM215AQ9Y5M1 114 aa11.01□□□□□ -0.65
GPC1-209ENST00000495100 IGKV3-7A0A075B6H7 116 aa11.01□□□□□ -0.65
GPC1-209ENST00000495100 COL4A2P08572 1712 aa11.01□□□□□ -0.65
GPC1-209ENST00000495100 TEX38Q6PEX7 206 aa11.01□□□□□ -0.65
GPC1-209ENST00000495100 VAMP8Q9BV40 100 aa11.01□□□□□ -0.65
GPC1-209ENST00000495100 IGHV3-49A0A0A0MS15 119 aa11□□□□□ -0.65
GPC1-209ENST00000495100 TRAV1-1A0A0B4J248 108 aa11□□□□□ -0.65
GPC1-209ENST00000495100 SERTM2A0A1B0GWG4 89 aa11□□□□□ -0.65
GPC1-209ENST00000495100 TAS2R45P59539 299 aa11□□□□□ -0.65
GPC1-209ENST00000495100 C22orf15Q8WYQ4 148 aa11□□□□□ -0.65
GPC1-209ENST00000495100 BORCS7Q96B45 105 aa11□□□□□ -0.65
GPC1-209ENST00000495100 PLSCR4Q9NRQ2 329 aa11□□□□□ -0.65
GPC1-209ENST00000495100 INSIG2Q9Y5U4 225 aa11□□□□□ -0.65
GPC1-209ENST00000495100 TRBV24-1A0A075B6N3 115 aa11□□□□□ -0.65
GPC1-209ENST00000495100 C15orf61A6NNL5 157 aa11□□□□□ -0.65
GPC1-209ENST00000495100 CDKN1AP38936 164 aa11□□□□□ -0.65
GPC1-209ENST00000495100 TIMM23BQ5SRD1 257 aa11□□□□□ -0.65
GPC1-209ENST00000495100 C10orf113Q5VZT2 155 aa11□□□□□ -0.65
GPC1-209ENST00000495100 OR1L4Q8NGR5 311 aa11□□□□□ -0.65
GPC1-209ENST00000495100 NAGKQ9UJ70 344 aa11□□□□□ -0.65
GPC1-209ENST00000495100 TEX50A0A1B0GTY4 177 aa11□□□□□ -0.65
GPC1-209ENST00000495100 EREGO14944 169 aa11□□□□□ -0.65
GPC1-209ENST00000495100 TCAPO15273 167 aa11□□□□□ -0.65
GPC1-209ENST00000495100 CT45A6P0DMU7 189 aa11□□□□□ -0.65
GPC1-209ENST00000495100 CT45A5P0DMU8 189 aa11□□□□□ -0.65
GPC1-209ENST00000495100 CT45A7P0DMV0 189 aa11□□□□□ -0.65
GPC1-209ENST00000495100 C21orf62-AS1Q17RA5 79 aa11□□□□□ -0.65
GPC1-209ENST00000495100 TCF24Q7RTU0 167 aa11□□□□□ -0.65
GPC1-209ENST00000495100 ZCCHC14Q8WYQ9 949 aaKnown RBP11□□□□□ -0.65
GPC1-209ENST00000495100 NEU1Q99519 415 aa11□□□□□ -0.65
GPC1-209ENST00000495100 PAXXQ9BUH6 204 aa11□□□□□ -0.65
GPC1-209ENST00000495100 ADAMTS20P59510 1910 aa10.99□□□□□ -0.65
GPC1-209ENST00000495100 SNAI2O43623 268 aa10.99□□□□□ -0.65
GPC1-209ENST00000495100 PLA2G2CQ5R387 149 aa10.99□□□□□ -0.65
GPC1-209ENST00000495100 DMRTC2Q8IXT2 367 aaPredicted RBP10.99□□□□□ -0.65
GPC1-209ENST00000495100 RPEQ96AT9 228 aa10.99□□□□□ -0.65
GPC1-209ENST00000495100 RITA1Q96K30 269 aa10.99□□□□□ -0.65
GPC1-209ENST00000495100 IL19Q9UHD0 177 aa10.99□□□□□ -0.65
GPC1-209ENST00000495100 IGHV3OR16-10A0A075B7F0 116 aa10.99□□□□□ -0.65
GPC1-209ENST00000495100 A0A1W2PN81 502 aa10.99□□□□□ -0.65
GPC1-209ENST00000495100 CGB1A6NKQ9 187 aa10.99□□□□□ -0.65
GPC1-209ENST00000495100 TPPP2P59282 170 aa10.99□□□□□ -0.65
GPC1-209ENST00000495100 C17orf58Q2M2W7 97 aa10.99□□□□□ -0.65
GPC1-209ENST00000495100 ZNF600Q6ZNG1 722 aa10.99□□□□□ -0.65
GPC1-209ENST00000495100 LINC00305Q7Z4B0 112 aa10.99□□□□□ -0.65
GPC1-209ENST00000495100 PRNDQ9UKY0 176 aa10.99□□□□□ -0.65
GPC1-209ENST00000495100 AMMECR1Q9Y4X0 333 aaPredicted RBP10.99□□□□□ -0.65
GPC1-209ENST00000495100 ARL2-SNX15V9GYD0 113 aa10.99□□□□□ -0.65
GPC1-209ENST00000495100 GATCO43716 136 aaKnown RBP10.98□□□□□ -0.65
GPC1-209ENST00000495100 LOXL3P58215 753 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 CTAG1AP78358 180 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 RPL19P84098 196 aaKnown RBP10.98□□□□□ -0.65
GPC1-209ENST00000495100 MMDQ15546 238 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 OR1L8Q8NGR8 309 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 TMEM170AQ8WVE7 144 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 PGLYRP4Q96LB8 373 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 GAL3ST2Q9H3Q3 398 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 KCNIP2Q9NS61 270 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 TET2Q6N021 2002 aaPredicted RBP10.98□□□□□ -0.65
GPC1-209ENST00000495100 COL5A1P20908 1838 aaPredicted RBP10.98□□□□□ -0.65
GPC1-209ENST00000495100 A0A1B0GW64 132 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 DPRXA6NFQ7 191 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 YPEL1O60688 119 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 RAB4AP20338 218 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 ZNF138P52744 262 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 PRNTQ86SH4 94 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 CORO2AQ92828 525 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 YPEL2Q96QA6 119 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 PMS2P5A8MQ11 134 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 STAG3L2P0CL84 134 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 STAG3L3P0CL85 134 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 AREGP15514 252 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 GRNP28799 593 aaKnown RBP10.98□□□□□ -0.65
GPC1-209ENST00000495100 FAM168AQ92567 244 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 SLC25A33Q9BSK2 321 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 GNB4Q9HAV0 340 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 ZNF586Q9NXT0 402 aa10.98□□□□□ -0.65
GPC1-209ENST00000495100 IGHV3-66A0A0C4DH42 116 aa10.97□□□□□ -0.65
GPC1-209ENST00000495100 SH2D7A6NKC9 451 aaPredicted RBP10.97□□□□□ -0.65
GPC1-209ENST00000495100 CRYABP02511 175 aaKnown RBP10.97□□□□□ -0.65
GPC1-209ENST00000495100 SRSF7Q16629 238 aaKnown RBP eCLIP10.97□□□□□ -0.65
GPC1-209ENST00000495100 ZNF430Q9H8G1 570 aaPredicted RBP10.97□□□□□ -0.65
GPC1-209ENST00000495100 TNFRSF19Q9NS68 423 aa10.97□□□□□ -0.65
GPC1-209ENST00000495100 IGKV1OR2-108A0A075B7D4 117 aa10.97□□□□□ -0.65
GPC1-209ENST00000495100 LOC102724200A0A096LPH7 203 aaPredicted RBP10.97□□□□□ -0.65
GPC1-209ENST00000495100 DIRC3C9JPN6 131 aa10.97□□□□□ -0.65
GPC1-209ENST00000495100 CORTO00230 105 aa10.97□□□□□ -0.65
GPC1-209ENST00000495100 FXYD7P58549 80 aa10.97□□□□□ -0.65
GPC1-209ENST00000495100 TMEM200BQ69YZ2 307 aa10.97□□□□□ -0.65
GPC1-209ENST00000495100 MUC15Q8N387 334 aa10.97□□□□□ -0.65
GPC1-209ENST00000495100 OR5R1Q8NH85 324 aa10.97□□□□□ -0.65
GPC1-209ENST00000495100 GAFA1Q96PS6 74 aa10.97□□□□□ -0.65
GPC1-209ENST00000495100 A0A0G2JNJ9 132 aa10.97□□□□□ -0.65
GPC1-209ENST00000495100 K7EN84 100 aa10.97□□□□□ -0.65
GPC1-209ENST00000495100 IGFL4Q6B9Z1 124 aa10.97□□□□□ -0.65
GPC1-209ENST00000495100 DNAJC4Q9NNZ3 241 aa10.97□□□□□ -0.65
GPC1-209ENST00000495100 Q9UFV3 132 aa10.97□□□□□ -0.65
GPC1-209ENST00000495100 TIMM9Q9Y5J7 89 aa10.97□□□□□ -0.65
GPC1-209ENST00000495100 TM4SF5O14894 197 aa10.96□□□□□ -0.65
GPC1-209ENST00000495100 PDPNQ86YL7 162 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms