RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 FCGR2BP31994 310 aaPredicted RBP7.88□□□□□ -1.15
NELFE-213ENST00000494956 RELQ04864 619 aaPredicted RBP7.88□□□□□ -1.15
NELFE-213ENST00000494956 TMEM187Q14656 261 aa7.88□□□□□ -1.15
NELFE-213ENST00000494956 PVRIGQ6DKI7 326 aa7.88□□□□□ -1.15
NELFE-213ENST00000494956 TOMM20LQ6UXN7 152 aa7.88□□□□□ -1.15
NELFE-213ENST00000494956 APRG1Q8IVJ8 170 aa7.88□□□□□ -1.15
NELFE-213ENST00000494956 TMEM116Q8NCL8 245 aa7.88□□□□□ -1.15
NELFE-213ENST00000494956 ST8SIA2Q92186 375 aa7.88□□□□□ -1.15
NELFE-213ENST00000494956 RBPMSQ93062 196 aaKnown RBP7.88□□□□□ -1.15
NELFE-213ENST00000494956 OR10C1Q96KK4 312 aa7.88□□□□□ -1.15
NELFE-213ENST00000494956 ATP6V0BQ99437 205 aa7.88□□□□□ -1.15
NELFE-213ENST00000494956 TXN2Q99757 166 aa7.88□□□□□ -1.15
NELFE-213ENST00000494956 SPAG8Q99932 426 aaPredicted RBP7.88□□□□□ -1.15
NELFE-213ENST00000494956 OVOL2Q9BRP0 275 aa7.88□□□□□ -1.15
NELFE-213ENST00000494956 GGTLC1Q9BX51 225 aa7.88□□□□□ -1.15
NELFE-213ENST00000494956 MCUBQ9NWR8 336 aa7.88□□□□□ -1.15
NELFE-213ENST00000494956 INS-IGF2F8WCM5 200 aa7.87□□□□□ -1.15
NELFE-213ENST00000494956 ATG12O94817 140 aa7.87□□□□□ -1.15
NELFE-213ENST00000494956 AKR1C4P17516 323 aa7.87□□□□□ -1.15
NELFE-213ENST00000494956 OPRK1P41145 380 aa7.87□□□□□ -1.15
NELFE-213ENST00000494956 SUPT4H1P63272 117 aaKnown RBP7.87□□□□□ -1.15
NELFE-213ENST00000494956 SURF2Q15527 256 aaPredicted RBP7.87□□□□□ -1.15
NELFE-213ENST00000494956 ANKRD55Q3KP44 614 aa7.87□□□□□ -1.15
NELFE-213ENST00000494956 LAMTOR1Q6IAA8 161 aa7.87□□□□□ -1.15
NELFE-213ENST00000494956 WFDC3Q8IUB2 231 aa7.87□□□□□ -1.15
NELFE-213ENST00000494956 DUSP18Q8NEJ0 188 aa7.87□□□□□ -1.15
NELFE-213ENST00000494956 TRIM63Q969Q1 353 aa7.87□□□□□ -1.15
NELFE-213ENST00000494956 PRRT1Q99946 306 aa7.87□□□□□ -1.15
NELFE-213ENST00000494956 ENY2Q9NPA8 101 aa7.87□□□□□ -1.15
NELFE-213ENST00000494956 PUS1Q9Y606 427 aaKnown RBP eCLIP7.87□□□□□ -1.15
NELFE-213ENST00000494956 V9GYH0 126 aa7.87□□□□□ -1.15
NELFE-213ENST00000494956 TRAV14DV4A0A0A6YYC5 116 aa7.86□□□□□ -1.15
NELFE-213ENST00000494956 CEBPZOSA8MTT3 80 aa7.86□□□□□ -1.15
NELFE-213ENST00000494956 SPCS3P61009 180 aa7.86□□□□□ -1.15
NELFE-213ENST00000494956 EWSR1Q01844 656 aaKnown RBP eCLIP7.86□□□□□ -1.15
NELFE-213ENST00000494956 DHODHQ02127 395 aa7.86□□□□□ -1.15
NELFE-213ENST00000494956 KLF9Q13886 244 aaPredicted RBP7.86□□□□□ -1.15
NELFE-213ENST00000494956 ZNF79Q15937 498 aa7.86□□□□□ -1.15
NELFE-213ENST00000494956 DEFB135Q30KP9 77 aa7.86□□□□□ -1.15
NELFE-213ENST00000494956 BSXQ3C1V8 233 aa7.86□□□□□ -1.15
NELFE-213ENST00000494956 TIGITQ495A1 244 aa7.86□□□□□ -1.15
NELFE-213ENST00000494956 PYDC2Q56P42 97 aa7.86□□□□□ -1.15
NELFE-213ENST00000494956 FAM90A2PQ658T7 463 aa7.86□□□□□ -1.15
NELFE-213ENST00000494956 TCF24Q7RTU0 167 aa7.86□□□□□ -1.15
NELFE-213ENST00000494956 TMEM170AQ8WVE7 144 aa7.86□□□□□ -1.15
NELFE-213ENST00000494956 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.86□□□□□ -1.15
NELFE-213ENST00000494956 RSL24D1Q9UHA3 163 aaKnown RBP7.86□□□□□ -1.15
NELFE-213ENST00000494956 RYR3Q15413 4870 aa7.86□□□□□ -1.15
NELFE-213ENST00000494956 CLN5O75503 358 aa7.85□□□□□ -1.15
NELFE-213ENST00000494956 B3GALNT1O75752 331 aa7.85□□□□□ -1.15
NELFE-213ENST00000494956 DFFBO76075 338 aa7.85□□□□□ -1.15
NELFE-213ENST00000494956 NPBWR1P48145 328 aa7.85□□□□□ -1.15
NELFE-213ENST00000494956 SUB1P53999 127 aaKnown RBP eCLIP7.85□□□□□ -1.15
NELFE-213ENST00000494956 AARDQ4LEZ3 155 aa7.85□□□□□ -1.15
NELFE-213ENST00000494956 ZNF600Q6ZNG1 722 aa7.85□□□□□ -1.15
NELFE-213ENST00000494956 LYZL2Q7Z4W2 148 aa7.85□□□□□ -1.15
NELFE-213ENST00000494956 FAM219AQ8IW50 185 aa7.85□□□□□ -1.15
NELFE-213ENST00000494956 FAM24BQ8N5W8 94 aa7.85□□□□□ -1.15
NELFE-213ENST00000494956 RBM38Q9H0Z9 239 aaKnown RBP7.85□□□□□ -1.15
NELFE-213ENST00000494956 HEYLQ9NQ87 328 aaPredicted RBP7.85□□□□□ -1.15
NELFE-213ENST00000494956 RABL2AQ9UBK7 228 aaPredicted RBP7.85□□□□□ -1.15
NELFE-213ENST00000494956 SCP2D1Q9UJQ7 156 aa7.85□□□□□ -1.15
NELFE-213ENST00000494956 RABL2BQ9UNT1 228 aa7.85□□□□□ -1.15
NELFE-213ENST00000494956 TMEM56-RWDD3S4R434 201 aa7.85□□□□□ -1.15
NELFE-213ENST00000494956 AGRNO00468 2067 aa7.84□□□□□ -1.15
NELFE-213ENST00000494956 LCE6AA0A183 80 aa7.84□□□□□ -1.15
NELFE-213ENST00000494956 OR4C46A6NHA9 309 aa7.84□□□□□ -1.15
NELFE-213ENST00000494956 IGKV1-17P01599 117 aa7.84□□□□□ -1.15
NELFE-213ENST00000494956 RND2P52198 227 aa7.84□□□□□ -1.15
NELFE-213ENST00000494956 TMED4Q7Z7H5 227 aa7.84□□□□□ -1.15
NELFE-213ENST00000494956 SLC24A4Q8NFF2 622 aa7.84□□□□□ -1.15
NELFE-213ENST00000494956 OR4X1Q8NH49 305 aa7.84□□□□□ -1.15
NELFE-213ENST00000494956 OR52E5Q8NH55 327 aa7.84□□□□□ -1.15
NELFE-213ENST00000494956 GALNT14Q96FL9 552 aa7.84□□□□□ -1.15
NELFE-213ENST00000494956 RBKSQ9H477 322 aa7.84□□□□□ -1.15
NELFE-213ENST00000494956 VSIRQ9H7M9 311 aa7.84□□□□□ -1.15
NELFE-213ENST00000494956 MAP6D1Q9H9H5 199 aa7.84□□□□□ -1.15
NELFE-213ENST00000494956 DNAH7Q8WXX0 4024 aa7.84□□□□□ -1.15
NELFE-213ENST00000494956 A0A0J9YWU9 116 aa7.83□□□□□ -1.16
NELFE-213ENST00000494956 CORTO00230 105 aa7.83□□□□□ -1.16
NELFE-213ENST00000494956 SULT1A3P0DMM9 295 aa7.83□□□□□ -1.16
NELFE-213ENST00000494956 SULT1A4P0DMN0 295 aa7.83□□□□□ -1.16
NELFE-213ENST00000494956 HTR2BP41595 481 aa7.83□□□□□ -1.16
NELFE-213ENST00000494956 RPL11P62913 178 aaKnown RBP7.83□□□□□ -1.16
NELFE-213ENST00000494956 RBMS2Q15434 407 aaKnown RBP7.83□□□□□ -1.16
NELFE-213ENST00000494956 C2orf83Q53S99 150 aa7.83□□□□□ -1.16
NELFE-213ENST00000494956 NMSQ5H8A3 153 aa7.83□□□□□ -1.16
NELFE-213ENST00000494956 LEMD1Q68G75 181 aa7.83□□□□□ -1.16
NELFE-213ENST00000494956 PRSS54Q6PEW0 395 aa7.83□□□□□ -1.16
NELFE-213ENST00000494956 CCDC190Q86UF4 302 aa7.83□□□□□ -1.16
NELFE-213ENST00000494956 TOMM5Q8N4H5 51 aa7.83□□□□□ -1.16
NELFE-213ENST00000494956 GINS3Q9BRX5 216 aa7.83□□□□□ -1.16
NELFE-213ENST00000494956 MS4A6AQ9H2W1 248 aa7.83□□□□□ -1.16
NELFE-213ENST00000494956 KCNIP3Q9Y2W7 256 aa7.83□□□□□ -1.16
NELFE-213ENST00000494956 CSMD3Q7Z407 3707 aa7.82□□□□□ -1.16
NELFE-213ENST00000494956 SPRY2O43597 315 aa7.82□□□□□ -1.16
NELFE-213ENST00000494956 IGLC1P0CG04 106 aa7.82□□□□□ -1.16
NELFE-213ENST00000494956 NPY1RP25929 384 aa7.82□□□□□ -1.16
NELFE-213ENST00000494956 DEFB131AP59861 70 aa7.82□□□□□ -1.16
NELFE-213ENST00000494956 TNFRSF9Q07011 255 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms