RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 PLA2G10O15496 165 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 PGLYRP1O75594 196 aaPredicted RBP0.72□□□□□ -2.29
ITGB1-216ENST00000493758 KRT75O95678 551 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 SERPINA7P05543 415 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 LGALS1P09382 135 aaKnown RBP0.72□□□□□ -2.29
ITGB1-216ENST00000493758 KCNE1P15382 129 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 RPS12P25398 132 aaKnown RBP0.72□□□□□ -2.29
ITGB1-216ENST00000493758 MSNP26038 577 aaKnown RBP0.72□□□□□ -2.29
ITGB1-216ENST00000493758 CCR7P32248 378 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 CSN1S1P47710 185 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 RAB14P61106 215 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 MAGOHP61326 146 aaKnown RBP0.72□□□□□ -2.29
ITGB1-216ENST00000493758 POLR2GP62487 172 aaKnown RBP eCLIP0.72□□□□□ -2.29
ITGB1-216ENST00000493758 CAV1Q03135 178 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 EMX1Q04741 257 aaPredicted RBP0.72□□□□□ -2.29
ITGB1-216ENST00000493758 TMEM155Q4W5P6 130 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 SSX8Q7RTT4 187 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 GID4Q8IVV7 300 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 TMEM86AQ8N2M4 240 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 OTUD6BQ8N6M0 293 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 SGMS2Q8NHU3 365 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 ASB17Q8WXJ9 295 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 ACOT12Q8WYK0 555 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 ROPN1LQ96C74 230 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 RSL24D1Q9UHA3 163 aaKnown RBP0.72□□□□□ -2.29
ITGB1-216ENST00000493758 NAT8Q9UHE5 227 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 COQ4Q9Y3A0 265 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 LSM5Q9Y4Y9 91 aaKnown RBP0.72□□□□□ -2.29
ITGB1-216ENST00000493758 RBM7Q9Y580 266 aaKnown RBP0.72□□□□□ -2.29
ITGB1-216ENST00000493758 TACC2O95359 2948 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 PRDM15P57071 1507 aaPredicted RBP0.72□□□□□ -2.29
ITGB1-216ENST00000493758 ATP10BO94823 1461 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 LRRC9Q6ZRR7 1453 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 MACF1Q9UPN3 7388 aaKnown RBP0.72□□□□□ -2.29
ITGB1-216ENST00000493758 CHD5Q8TDI0 1954 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 MED13LQ71F56 2210 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 ABCC5O15440 1437 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 EEA1Q15075 1411 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 C9orf84Q5VXU9 1444 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 ALPK3Q96L96 1907 aa0.72□□□□□ -2.29
ITGB1-216ENST00000493758 DEPDC5O75140 1603 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 DYNC2H1Q8NCM8 4307 aaKnown RBP0.71□□□□□ -2.3
ITGB1-216ENST00000493758 TIAM1Q13009 1591 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 EVC2Q86UK5 1308 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 CCDC88CQ9P219 2028 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 RGPD3A6NKT7 1758 aaPredicted RBP0.71□□□□□ -2.3
ITGB1-216ENST00000493758 RGPD4Q7Z3J3 1758 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 DNAH1Q9P2D7 4330 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 C21orf140B9A014 251 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 I3L521 148 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 LST1O00453 97 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 ORC5O43913 435 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 DCTN3O75935 186 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 NSA2O95478 260 aaKnown RBP0.71□□□□□ -2.3
ITGB1-216ENST00000493758 PPBPP02775 128 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 ISG15P05161 165 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 CALB1P05937 261 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 MSMBP08118 114 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 SRP19P09132 144 aaKnown RBP0.71□□□□□ -2.3
ITGB1-216ENST00000493758 TFPTP0C1Z6 253 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 FAM228BP0C875 321 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 CCL1P22362 96 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 S100A7P31151 101 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 MAP2K4P45985 399 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 RPL28P46779 137 aaKnown RBP0.71□□□□□ -2.3
ITGB1-216ENST00000493758 REG1BP48304 166 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 MARCKSL1P49006 195 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 TCL1AP56279 114 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 OR4D2P58180 307 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 NAA20P61599 178 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 TNFAIP6P98066 277 aaPredicted RBP0.71□□□□□ -2.3
ITGB1-216ENST00000493758 TNFAIP8L3Q5GJ75 292 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 COQ5Q5HYK3 327 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 CDKL4Q5MAI5 379 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 LPCAT4Q643R3 524 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 GLT8D1Q68CQ7 371 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 CD200R1LQ6Q8B3 271 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 SLC36A1Q7Z2H8 476 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 ZNF550Q7Z398 422 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 RPS19BP1Q86WX3 136 aaKnown RBP0.71□□□□□ -2.3
ITGB1-216ENST00000493758 C10orf67Q8IYJ2 551 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 RPP25LQ8N5L8 163 aaKnown RBP0.71□□□□□ -2.3
ITGB1-216ENST00000493758 ERMAPQ96PL5 475 aaPredicted RBP0.71□□□□□ -2.3
ITGB1-216ENST00000493758 PAQR5Q9NXK6 330 aaPredicted RBP0.71□□□□□ -2.3
ITGB1-216ENST00000493758 ANGPT4Q9Y264 503 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 MGAM2Q2M2H8 2515 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 FMN1Q68DA7 1419 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 SETD5Q9C0A6 1442 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 YTHDC2Q9H6S0 1430 aaKnown RBP0.71□□□□□ -2.3
ITGB1-216ENST00000493758 SSPOA2VEC9 5147 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 DNAH7Q8WXX0 4024 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 COL7A1Q02388 2944 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 KIF14Q15058 1648 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 ABCA5Q8WWZ7 1642 aa0.71□□□□□ -2.3
ITGB1-216ENST00000493758 FLT4P35916 1363 aa0.7□□□□□ -2.3
ITGB1-216ENST00000493758 ADGRB1O14514 1584 aa0.7□□□□□ -2.3
ITGB1-216ENST00000493758 REREQ9P2R6 1566 aa0.7□□□□□ -2.3
ITGB1-216ENST00000493758 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.7□□□□□ -2.33e-9■■□□□ 13.8
ITGB1-216ENST00000493758 ITSN1Q15811 1721 aa0.7□□□□□ -2.3
ITGB1-216ENST00000493758 IGKV2-40A0A087WW87 121 aaPredicted RBP0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms