RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 PPP1CCP36873 323 aaKnown RBP1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 SUB1P53999 127 aaKnown RBP eCLIP1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 DLX1P56177 255 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 MRPS15P82914 257 aaKnown RBP1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 ZNF79Q15937 498 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 MAJINQ3KP22 176 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 C2orf76Q3KRA6 126 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 SLC22A6Q4U2R8 563 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 Q75L30 129 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 ERASQ7Z444 233 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 SH2D6Q7Z4S9 175 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 TMEM61Q8N0U2 210 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 LRTM2Q8N967 370 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 LFNGQ8NES3 379 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 OR4D5Q8NGN0 318 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 OR10R2Q8NGX6 335 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 NEK7Q8TDX7 302 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 OTULINQ96BN8 352 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 MOB3AQ96BX8 217 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 PHB2Q99623 299 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 SELENOIQ9C0D9 397 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 RBM38Q9H0Z9 239 aaKnown RBP1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 RDH8Q9NYR8 311 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 MRPS16Q9Y3D3 137 aaKnown RBP1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 SVEP1Q4LDE5 3571 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 IGHV4-4A0A075B6R2 117 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 LOC100130705A0A1B0GUX0 176 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 TRDV1A0A1B0GX56 115 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 M0R1X1 148 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 RTL8CO15255 209 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 PROP1O75360 226 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 DUSP14O95147 198 aaKnown RBP1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 LY6G6CO95867 125 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 SERPINE2P07093 398 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 SAA1P0DJI8 122 aaPredicted RBP1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 CALRP27797 417 aaKnown RBP1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 CEACAM6P40199 344 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 NPBWR1P48145 328 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 MFAP2P55001 183 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 ERVK-16P61578 105 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 C15orf32Q32M92 178 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 TIMM50Q3ZCQ8 353 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 HSD17B12Q53GQ0 312 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 C1orf134Q5TEV5 83 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 DHRS11Q6UWP2 260 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 FOXI2Q6ZQN5 318 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 HOGA1Q86XE5 327 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 ARL6IP6Q8N6S5 226 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 TPRX1Q8N7U7 411 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 DMBX1Q8NFW5 382 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 OR4X1Q8NH49 305 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 ZFAND1Q8TCF1 268 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 APH1BQ8WW43 257 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 UFD1Q92890 307 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 RAB3CQ96E17 227 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 CMSS1Q9BQ75 279 aaKnown RBP1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 ZNF430Q9H8G1 570 aaPredicted RBP1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 PLEKHJ1Q9NW61 149 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 C21orf62Q9NYP8 219 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 DOK5Q9P104 306 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 AK3Q9UIJ7 227 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 GPR132Q9UNW8 380 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 DNAH8Q96JB1 4490 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 PCLOQ9Y6V0 5065 aa1.95□□□□□ -2.1
DEPDC1-203ENST00000488146 A0A087X0K7 114 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 TRAV39A0A0B4J263 110 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 IGLV5-39A0A0G2JS06 123 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 H7C2Y5 167 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 RBMXL2O75526 392 aaKnown RBP1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 WBP4O75554 376 aaKnown RBP1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 CRTAPO75718 401 aaPredicted RBP1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 NMBP08949 121 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 P0C879 139 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 SLC2A2P11168 524 aaPredicted RBP1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 SLC25A6P12236 298 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 HLA-DRB4P13762 266 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 TFPI2P48307 235 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 HCCSP53701 268 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 TAS2R46P59540 309 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 RPS25P62851 125 aaKnown RBP1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 SUPT4H1P63272 117 aaKnown RBP1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 PRCDQ00LT1 54 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 SLAQ13239 276 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 UNC119Q13432 240 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 GNMTQ14749 295 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 SURF2Q15527 256 aaPredicted RBP1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 HACD4Q5VWC8 232 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 C6orf223Q8N319 242 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 DEFB125Q8N687 156 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 OR4A16Q8NH70 328 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 PTH2Q96A98 100 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 MRPL53Q96EL3 112 aaKnown RBP1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 ZNF414Q96IQ9 312 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 RARRES2Q99969 163 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 PLEKHA3Q9HB20 300 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 BLOC1S6Q9UL45 172 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 TBC1D24Q9ULP9 559 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 GOLT1BQ9Y3E0 138 aa1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 V9GYY5 206 aaPredicted RBP1.94□□□□□ -2.1
DEPDC1-203ENST00000488146 HLA-DRB4X5D2U9 266 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms