RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 TOMM20LQ6UXN7 152 aa8.54□□□□□ -1.04
SPEN-205ENST00000487496 TMEM116Q8NCL8 245 aa8.54□□□□□ -1.04
SPEN-205ENST00000487496 TRIM63Q969Q1 353 aa8.54□□□□□ -1.04
SPEN-205ENST00000487496 RHPN1-AS1Q9BWJ2 59 aa8.54□□□□□ -1.04
SPEN-205ENST00000487496 FNDC4Q9H6D8 234 aaPredicted RBP8.54□□□□□ -1.04
SPEN-205ENST00000487496 PRR13Q9NZ81 148 aa8.54□□□□□ -1.04
SPEN-205ENST00000487496 IGHV3-49A0A0A0MS15 119 aa8.53□□□□□ -1.04
SPEN-205ENST00000487496 TRAV14DV4A0A0A6YYC5 116 aa8.53□□□□□ -1.04
SPEN-205ENST00000487496 TMEM50AO95807 157 aa8.53□□□□□ -1.04
SPEN-205ENST00000487496 LYL1P12980 280 aa8.53□□□□□ -1.04
SPEN-205ENST00000487496 AKR1C4P17516 323 aa8.53□□□□□ -1.04
SPEN-205ENST00000487496 S100A5P33763 92 aa8.53□□□□□ -1.04
SPEN-205ENST00000487496 OPRK1P41145 380 aa8.53□□□□□ -1.04
SPEN-205ENST00000487496 SUPT4H1P63272 117 aaKnown RBP8.53□□□□□ -1.04
SPEN-205ENST00000487496 ZNF79Q15937 498 aa8.53□□□□□ -1.04
SPEN-205ENST00000487496 MLANAQ16655 118 aa8.53□□□□□ -1.04
SPEN-205ENST00000487496 CCDC190Q86UF4 302 aa8.53□□□□□ -1.04
SPEN-205ENST00000487496 TOMM5Q8N4H5 51 aa8.53□□□□□ -1.04
SPEN-205ENST00000487496 IL22RA2Q969J5 263 aa8.53□□□□□ -1.04
SPEN-205ENST00000487496 RNF2Q99496 336 aa8.53□□□□□ -1.04
SPEN-205ENST00000487496 FAM110AQ9BQ89 295 aa8.53□□□□□ -1.04
SPEN-205ENST00000487496 GGTLC1Q9BX51 225 aa8.53□□□□□ -1.04
SPEN-205ENST00000487496 HEYLQ9NQ87 328 aaPredicted RBP8.53□□□□□ -1.04
SPEN-205ENST00000487496 MRPL36Q9P0J6 103 aaKnown RBP8.53□□□□□ -1.04
SPEN-205ENST00000487496 UBQLN2Q9UHD9 624 aa8.53□□□□□ -1.04
SPEN-205ENST00000487496 IGHV3OR16-13A0A075B7E8 117 aa8.52□□□□□ -1.05
SPEN-205ENST00000487496 LOC102724200A0A096LPH7 203 aaPredicted RBP8.52□□□□□ -1.05
SPEN-205ENST00000487496 IGHV3-74A0A0B4J1X5 117 aa8.52□□□□□ -1.05
SPEN-205ENST00000487496 A0A0B4J2A0 478 aa8.52□□□□□ -1.05
SPEN-205ENST00000487496 OR4C46A6NHA9 309 aa8.52□□□□□ -1.05
SPEN-205ENST00000487496 ZNF701M0R085 212 aaPredicted RBP8.52□□□□□ -1.05
SPEN-205ENST00000487496 CLN5O75503 358 aa8.52□□□□□ -1.05
SPEN-205ENST00000487496 ATF4P18848 351 aaPredicted RBP8.52□□□□□ -1.05
SPEN-205ENST00000487496 FAUP35544 74 aaKnown RBP8.52□□□□□ -1.05
SPEN-205ENST00000487496 HTR2BP41595 481 aa8.52□□□□□ -1.05
SPEN-205ENST00000487496 AP3S2P59780 193 aa8.52□□□□□ -1.05
SPEN-205ENST00000487496 ODF3L2Q3SX64 289 aa8.52□□□□□ -1.05
SPEN-205ENST00000487496 ZNF600Q6ZNG1 722 aa8.52□□□□□ -1.05
SPEN-205ENST00000487496 LYZL2Q7Z4W2 148 aa8.52□□□□□ -1.05
SPEN-205ENST00000487496 OR4X1Q8NH49 305 aa8.52□□□□□ -1.05
SPEN-205ENST00000487496 SHPKQ9UHJ6 478 aa8.52□□□□□ -1.05
SPEN-205ENST00000487496 PUS1Q9Y606 427 aaKnown RBP eCLIP8.52□□□□□ -1.05
SPEN-205ENST00000487496 A0A1B0GU03 582 aa8.51□□□□□ -1.05
SPEN-205ENST00000487496 CEBPZOSA8MTT3 80 aa8.51□□□□□ -1.05
SPEN-205ENST00000487496 NXPH3O95157 252 aa8.51□□□□□ -1.05
SPEN-205ENST00000487496 SULT1A3P0DMM9 295 aa8.51□□□□□ -1.05
SPEN-205ENST00000487496 SULT1A4P0DMN0 295 aa8.51□□□□□ -1.05
SPEN-205ENST00000487496 C2orf83Q53S99 150 aa8.51□□□□□ -1.05
SPEN-205ENST00000487496 NMSQ5H8A3 153 aa8.51□□□□□ -1.05
SPEN-205ENST00000487496 FAM90A2PQ658T7 463 aa8.51□□□□□ -1.05
SPEN-205ENST00000487496 LILRB2Q8N423 598 aa8.51□□□□□ -1.05
SPEN-205ENST00000487496 SLC24A4Q8NFF2 622 aa8.51□□□□□ -1.05
SPEN-205ENST00000487496 GINS3Q9BRX5 216 aa8.51□□□□□ -1.05
SPEN-205ENST00000487496 ZFAND3Q9H8U3 227 aa8.51□□□□□ -1.05
SPEN-205ENST00000487496 CACFD1Q9UGQ2 172 aa8.51□□□□□ -1.05
SPEN-205ENST00000487496 IGKV3-7A0A075B6H7 116 aa8.5□□□□□ -1.05
SPEN-205ENST00000487496 RPS10-NUDT3A0A1W2PQS6 291 aa8.5□□□□□ -1.05
SPEN-205ENST00000487496 APOHP02749 345 aaPredicted RBP8.5□□□□□ -1.05
SPEN-205ENST00000487496 ANXA3P12429 323 aa8.5□□□□□ -1.05
SPEN-205ENST00000487496 CCR6P51684 374 aa8.5□□□□□ -1.05
SPEN-205ENST00000487496 ZFAND6Q6FIF0 208 aa8.5□□□□□ -1.05
SPEN-205ENST00000487496 TMED4Q7Z7H5 227 aa8.5□□□□□ -1.05
SPEN-205ENST00000487496 LGI3Q8N145 548 aa8.5□□□□□ -1.05
SPEN-205ENST00000487496 RNASEH2CQ8TDP1 164 aaKnown RBP8.5□□□□□ -1.05
SPEN-205ENST00000487496 TMEM170AQ8WVE7 144 aa8.5□□□□□ -1.05
SPEN-205ENST00000487496 DEDD2Q8WXF8 326 aa8.5□□□□□ -1.05
SPEN-205ENST00000487496 ST8SIA2Q92186 375 aa8.5□□□□□ -1.05
SPEN-205ENST00000487496 VSIRQ9H7M9 311 aa8.5□□□□□ -1.05
SPEN-205ENST00000487496 TRAV30A0A087WSZ9 112 aa8.49□□□□□ -1.05
SPEN-205ENST00000487496 SCGB2A1O75556 95 aa8.49□□□□□ -1.05
SPEN-205ENST00000487496 IGKV1-17P01599 117 aa8.49□□□□□ -1.05
SPEN-205ENST00000487496 NPY1RP25929 384 aa8.49□□□□□ -1.05
SPEN-205ENST00000487496 BMI1P35226 326 aa8.49□□□□□ -1.05
SPEN-205ENST00000487496 TFPI2P48307 235 aa8.49□□□□□ -1.05
SPEN-205ENST00000487496 SRPXP78539 464 aa8.49□□□□□ -1.05
SPEN-205ENST00000487496 TNFRSF9Q07011 255 aa8.49□□□□□ -1.05
SPEN-205ENST00000487496 SMCO1Q147U7 214 aa8.49□□□□□ -1.05
SPEN-205ENST00000487496 TIGITQ495A1 244 aa8.49□□□□□ -1.05
SPEN-205ENST00000487496 TMEM128Q5BJH2 165 aa8.49□□□□□ -1.05
SPEN-205ENST00000487496 SPANXN2Q5MJ10 180 aa8.49□□□□□ -1.05
SPEN-205ENST00000487496 PRSS54Q6PEW0 395 aa8.49□□□□□ -1.05
SPEN-205ENST00000487496 TCF24Q7RTU0 167 aa8.49□□□□□ -1.05
SPEN-205ENST00000487496 GBGT1Q8N5D6 347 aa8.49□□□□□ -1.05
SPEN-205ENST00000487496 SLC25A21Q9BQT8 299 aaPredicted RBP8.49□□□□□ -1.05
SPEN-205ENST00000487496 OVOL2Q9BRP0 275 aa8.49□□□□□ -1.05
SPEN-205ENST00000487496 SRRQ9GZT4 340 aa8.49□□□□□ -1.05
SPEN-205ENST00000487496 HSPB7Q9UBY9 170 aa8.49□□□□□ -1.05
SPEN-205ENST00000487496 PIGBOS1A0A0B4J2F0 54 aa8.48□□□□□ -1.05
SPEN-205ENST00000487496 IGHV3-66A0A0C4DH42 116 aa8.48□□□□□ -1.05
SPEN-205ENST00000487496 DFFBO76075 338 aa8.48□□□□□ -1.05
SPEN-205ENST00000487496 CD5P06127 495 aa8.48□□□□□ -1.05
SPEN-205ENST00000487496 IGLC1P0CG04 106 aa8.48□□□□□ -1.05
SPEN-205ENST00000487496 SLC25A4P12235 298 aa8.48□□□□□ -1.05
SPEN-205ENST00000487496 NPPCP23582 126 aa8.48□□□□□ -1.05
SPEN-205ENST00000487496 RND2P52198 227 aa8.48□□□□□ -1.05
SPEN-205ENST00000487496 APOC4P55056 127 aa8.48□□□□□ -1.05
SPEN-205ENST00000487496 CMC4P56277 68 aaPredicted RBP8.48□□□□□ -1.05
SPEN-205ENST00000487496 PAFAH1B2P68402 229 aa8.48□□□□□ -1.05
SPEN-205ENST00000487496 NOXA1Q86UR1 476 aa8.48□□□□□ -1.05
SPEN-205ENST00000487496 APRG1Q8IVJ8 170 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms