RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 RLN1P04808 185 aa5.4□□□□□ -1.54
PDPN-205ENST00000487038 HLA-DRB4P13762 266 aa5.4□□□□□ -1.54
PDPN-205ENST00000487038 BTF3P20290 206 aaKnown RBP5.4□□□□□ -1.54
PDPN-205ENST00000487038 RAB3BP20337 219 aa5.4□□□□□ -1.54
PDPN-205ENST00000487038 CRYBB3P26998 211 aa5.4□□□□□ -1.54
PDPN-205ENST00000487038 G6PCP35575 357 aa5.4□□□□□ -1.54
PDPN-205ENST00000487038 HERV-K104P61576 105 aa5.4□□□□□ -1.54
PDPN-205ENST00000487038 MLLT11Q13015 90 aaPredicted RBP5.4□□□□□ -1.54
PDPN-205ENST00000487038 TMEM17Q86X19 198 aa5.4□□□□□ -1.54
PDPN-205ENST00000487038 PACRGLQ8N7B6 248 aa5.4□□□□□ -1.54
PDPN-205ENST00000487038 TMEM230Q96A57 120 aa5.4□□□□□ -1.54
PDPN-205ENST00000487038 C7orf50Q9BRJ6 194 aaKnown RBP5.4□□□□□ -1.54
PDPN-205ENST00000487038 SCN3BQ9NY72 215 aa5.4□□□□□ -1.54
PDPN-205ENST00000487038 GOLT1BQ9Y3E0 138 aa5.4□□□□□ -1.54
PDPN-205ENST00000487038 YTHDF2Q9Y5A9 579 aaKnown RBP5.4□□□□□ -1.54
PDPN-205ENST00000487038 HLA-DRB4X5D2U9 266 aa5.4□□□□□ -1.54
PDPN-205ENST00000487038 HMCN2Q8NDA2 5059 aa5.39□□□□□ -1.55
PDPN-205ENST00000487038 TRAV1-2A0A0B4J238 106 aa5.39□□□□□ -1.55
PDPN-205ENST00000487038 A0A1B0GU03 582 aa5.39□□□□□ -1.55
PDPN-205ENST00000487038 LOC102723971A0A1B0GUV8 181 aa5.39□□□□□ -1.55
PDPN-205ENST00000487038 RPS10-NUDT3A0A1W2PQS6 291 aa5.39□□□□□ -1.55
PDPN-205ENST00000487038 H3BMM0 161 aa5.39□□□□□ -1.55
PDPN-205ENST00000487038 J3QL48 77 aa5.39□□□□□ -1.55
PDPN-205ENST00000487038 NUDT3O95989 172 aa5.39□□□□□ -1.55
PDPN-205ENST00000487038 SNCAP37840 140 aa5.39□□□□□ -1.55
PDPN-205ENST00000487038 OR10A3P58181 314 aa5.39□□□□□ -1.55
PDPN-205ENST00000487038 PRCDQ00LT1 54 aa5.39□□□□□ -1.55
PDPN-205ENST00000487038 FABP5Q01469 135 aa5.39□□□□□ -1.55
PDPN-205ENST00000487038 CLINT1Q14677 625 aa5.39□□□□□ -1.55
PDPN-205ENST00000487038 RRN3P1Q2M238 152 aa5.39□□□□□ -1.55
PDPN-205ENST00000487038 CMTM1Q8IZ96 169 aa5.39□□□□□ -1.55
PDPN-205ENST00000487038 LYPD1Q8N2G4 141 aa5.39□□□□□ -1.55
PDPN-205ENST00000487038 OR4A16Q8NH70 328 aa5.39□□□□□ -1.55
PDPN-205ENST00000487038 TRAV30A0A087WSZ9 112 aa5.38□□□□□ -1.55
PDPN-205ENST00000487038 FAM90A26D6RGX4 464 aa5.38□□□□□ -1.55
PDPN-205ENST00000487038 PTGES3LE9PB15 166 aa5.38□□□□□ -1.55
PDPN-205ENST00000487038 EREGO14944 169 aa5.38□□□□□ -1.55
PDPN-205ENST00000487038 SSX5O60225 188 aa5.38□□□□□ -1.55
PDPN-205ENST00000487038 TMEM50AO95807 157 aa5.38□□□□□ -1.55
PDPN-205ENST00000487038 HNRNPCP07910 306 aaKnown RBP eCLIP5.38□□□□□ -1.55
PDPN-205ENST00000487038 S100GP29377 79 aa5.38□□□□□ -1.55
PDPN-205ENST00000487038 LPAR6P43657 344 aa5.38□□□□□ -1.55
PDPN-205ENST00000487038 NKX2-1P43699 371 aaPredicted RBP5.38□□□□□ -1.55
PDPN-205ENST00000487038 SUB1P53999 127 aaKnown RBP eCLIP5.38□□□□□ -1.55
PDPN-205ENST00000487038 KRTAP10-2P60368 255 aa5.38□□□□□ -1.55
PDPN-205ENST00000487038 LAIR2Q6ISS4 152 aa5.38□□□□□ -1.55
PDPN-205ENST00000487038 LGALS14Q8TCE9 139 aa5.38□□□□□ -1.55
PDPN-205ENST00000487038 FCAMRQ8WWV6 532 aa5.38□□□□□ -1.55
PDPN-205ENST00000487038 NRN1Q9NPD7 142 aa5.38□□□□□ -1.55
PDPN-205ENST00000487038 A0A1W2PPQ1 181 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 DBX1A6NMT0 343 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 LYRM9A8MSI8 78 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 GSTZ1O43708 216 aaPredicted RBP5.37□□□□□ -1.55
PDPN-205ENST00000487038 CLN5O75503 358 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 GNAO1P09471 354 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 PTHLHP12272 177 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 OPRK1P41145 380 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 PPP5CP53041 499 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 CDPF1Q6NVV7 123 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 C16orf54Q6UWD8 224 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 SIGLEC15Q6ZMC9 328 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 H2BFWTQ7Z2G1 175 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 HOGA1Q86XE5 327 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 SLC35G3Q8N808 338 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 OR5AP2Q8NGF4 316 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 GLMPQ8WWB7 406 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 TMEM208Q9BTX3 173 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 PDCD10Q9BUL8 212 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 Q9H3A6 140 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 Q9H8V8 135 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 PGPEP1Q9NXJ5 209 aa5.37□□□□□ -1.55
PDPN-205ENST00000487038 F5H768 121 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 FAM229AH3BQW9 127 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 PGLYRP1O75594 196 aaPredicted RBP5.36□□□□□ -1.55
PDPN-205ENST00000487038 IGKV3-20P01619 116 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 ATP5G1P05496 136 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 NUP62P37198 522 aaPredicted RBP5.36□□□□□ -1.55
PDPN-205ENST00000487038 ID1P41134 155 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 CBX5P45973 191 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 ATP5G3P48201 142 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 FXYD7P58549 80 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 ERVFC1-1P60608 527 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 HSPE1P61604 102 aaKnown RBP5.36□□□□□ -1.55
PDPN-205ENST00000487038 USF2Q15853 346 aaPredicted RBP5.36□□□□□ -1.55
PDPN-205ENST00000487038 SPATA31B1PQ5VZV4 182 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 FOXI2Q6ZQN5 318 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 SSX7Q7RTT5 188 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 OR6F1Q8NGZ6 308 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 OR4X1Q8NH49 305 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 COQ8AQ8NI60 647 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 Q8WTZ3 238 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 CLUHP3Q96NS8 147 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 MGLLQ99685 303 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 MAGT1Q9H0U3 335 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 SAV1Q9H4B6 383 aaPredicted RBP5.36□□□□□ -1.55
PDPN-205ENST00000487038 SCPEP1Q9HB40 452 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 FAM212BQ9NTI7 297 aaPredicted RBP5.36□□□□□ -1.55
PDPN-205ENST00000487038 EHFQ9NZC4 300 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 TPRKBQ9Y3C4 175 aa5.36□□□□□ -1.55
PDPN-205ENST00000487038 LINC00588Q9Y4M8 146 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms