RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 CXorf58Q96LI9 332 aa9.8□□□□□ -0.84
HDAC7-223ENST00000485796 FNDC4Q9H6D8 234 aaPredicted RBP9.8□□□□□ -0.84
HDAC7-223ENST00000485796 LYRM2Q9NU23 88 aaPredicted RBP9.8□□□□□ -0.84
HDAC7-223ENST00000485796 MRPL36Q9P0J6 103 aaKnown RBP9.8□□□□□ -0.84
HDAC7-223ENST00000485796 NOTCH3Q9UM47 2321 aa9.79□□□□□ -0.84
HDAC7-223ENST00000485796 IGHV4OR15-8A0A075B7B6 117 aa9.79□□□□□ -0.84
HDAC7-223ENST00000485796 A0A087WW49 117 aa9.79□□□□□ -0.84
HDAC7-223ENST00000485796 RPS10-NUDT3A0A1W2PQS6 291 aa9.79□□□□□ -0.84
HDAC7-223ENST00000485796 IGSF23A1L1A6 192 aa9.79□□□□□ -0.84
HDAC7-223ENST00000485796 LGALS1P09382 135 aaKnown RBP9.79□□□□□ -0.84
HDAC7-223ENST00000485796 P2RY1P47900 373 aa9.79□□□□□ -0.84
HDAC7-223ENST00000485796 ETFRF1Q6IPR1 90 aa9.79□□□□□ -0.84
HDAC7-223ENST00000485796 ACSM6Q6P461 480 aa9.79□□□□□ -0.84
HDAC7-223ENST00000485796 UBAC2Q8NBM4 344 aa9.79□□□□□ -0.84
HDAC7-223ENST00000485796 C4orf3Q8WVX3 66 aa9.79□□□□□ -0.84
HDAC7-223ENST00000485796 CCDC140Q96MF4 163 aa9.79□□□□□ -0.84
HDAC7-223ENST00000485796 C21orf62Q9NYP8 219 aa9.79□□□□□ -0.84
HDAC7-223ENST00000485796 PKD1L1Q8TDX9 2849 aa9.78□□□□□ -0.84
HDAC7-223ENST00000485796 TRBV7-1A0A0A6YYK4 115 aa9.78□□□□□ -0.84
HDAC7-223ENST00000485796 PMS2P5A8MQ11 134 aa9.78□□□□□ -0.84
HDAC7-223ENST00000485796 PPP5D1E7EU14 171 aa9.78□□□□□ -0.84
HDAC7-223ENST00000485796 F8W735 103 aaPredicted RBP9.78□□□□□ -0.84
HDAC7-223ENST00000485796 CST7O76096 145 aa9.78□□□□□ -0.84
HDAC7-223ENST00000485796 MFAP4P55083 255 aa9.78□□□□□ -0.84
HDAC7-223ENST00000485796 CD69Q07108 199 aa9.78□□□□□ -0.84
HDAC7-223ENST00000485796 Q56UQ5 140 aa9.78□□□□□ -0.84
HDAC7-223ENST00000485796 ZNF343Q6P1L6 599 aa9.78□□□□□ -0.84
HDAC7-223ENST00000485796 CLEC19AQ6UXS0 136 aa9.78□□□□□ -0.84
HDAC7-223ENST00000485796 SLC16A13Q7RTY0 426 aa9.78□□□□□ -0.84
HDAC7-223ENST00000485796 AKAP14Q86UN6 197 aa9.78□□□□□ -0.84
HDAC7-223ENST00000485796 TMEM252Q8N6L7 170 aa9.78□□□□□ -0.84
HDAC7-223ENST00000485796 OR10P1Q8NGE3 313 aa9.78□□□□□ -0.84
HDAC7-223ENST00000485796 ZNF502Q8TBZ5 544 aa9.78□□□□□ -0.84
HDAC7-223ENST00000485796 ST6GAL2Q96JF0 529 aa9.78□□□□□ -0.84
HDAC7-223ENST00000485796 SLC25A31Q9H0C2 315 aa9.78□□□□□ -0.84
HDAC7-223ENST00000485796 ZC4H2Q9NQZ6 224 aa9.78□□□□□ -0.84
HDAC7-223ENST00000485796 MGAM2Q2M2H8 2515 aa9.77□□□□□ -0.85
HDAC7-223ENST00000485796 FXYD6-FXYD2A0A087WZ82 144 aa9.77□□□□□ -0.85
HDAC7-223ENST00000485796 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.77□□□□□ -0.85
HDAC7-223ENST00000485796 CLEC3BP05452 202 aa9.77□□□□□ -0.85
HDAC7-223ENST00000485796 LYL1P12980 280 aa9.77□□□□□ -0.85
HDAC7-223ENST00000485796 GPX4P36969 197 aaPredicted RBP9.77□□□□□ -0.85
HDAC7-223ENST00000485796 SULT1A1P50225 295 aa9.77□□□□□ -0.85
HDAC7-223ENST00000485796 RUNX1Q01196 453 aa9.77□□□□□ -0.85
HDAC7-223ENST00000485796 ARL16Q0P5N6 197 aa9.77□□□□□ -0.85
HDAC7-223ENST00000485796 STX12Q86Y82 276 aa9.77□□□□□ -0.85
HDAC7-223ENST00000485796 TMEM217Q8N7C4 229 aa9.77□□□□□ -0.85
HDAC7-223ENST00000485796 OR11H1Q8NG94 326 aa9.77□□□□□ -0.85
HDAC7-223ENST00000485796 OR1N2Q8NGR9 330 aa9.77□□□□□ -0.85
HDAC7-223ENST00000485796 ACY3Q96HD9 319 aa9.77□□□□□ -0.85
HDAC7-223ENST00000485796 ZNF414Q96IQ9 312 aa9.77□□□□□ -0.85
HDAC7-223ENST00000485796 SLC35E1Q96K37 410 aa9.77□□□□□ -0.85
HDAC7-223ENST00000485796 PEF1Q9UBV8 284 aaKnown RBP9.77□□□□□ -0.85
HDAC7-223ENST00000485796 SMCO3A2RU48 225 aa9.76□□□□□ -0.85
HDAC7-223ENST00000485796 OR2T8A6NH00 312 aa9.76□□□□□ -0.85
HDAC7-223ENST00000485796 PRSS46E5RG02 174 aa9.76□□□□□ -0.85
HDAC7-223ENST00000485796 CCL24O00175 119 aa9.76□□□□□ -0.85
HDAC7-223ENST00000485796 BMPR1BO00238 502 aa9.76□□□□□ -0.85
HDAC7-223ENST00000485796 GNG7O60262 68 aa9.76□□□□□ -0.85
HDAC7-223ENST00000485796 HSPB1P04792 205 aaKnown RBP9.76□□□□□ -0.85
HDAC7-223ENST00000485796 SLC25A4P12235 298 aa9.76□□□□□ -0.85
HDAC7-223ENST00000485796 RPL12P30050 165 aaKnown RBP9.76□□□□□ -0.85
HDAC7-223ENST00000485796 GPR183P32249 361 aa9.76□□□□□ -0.85
HDAC7-223ENST00000485796 ARL3P36405 182 aa9.76□□□□□ -0.85
HDAC7-223ENST00000485796 NUP62P37198 522 aaPredicted RBP9.76□□□□□ -0.85
HDAC7-223ENST00000485796 NPBWR1P48145 328 aa9.76□□□□□ -0.85
HDAC7-223ENST00000485796 RND2P52198 227 aa9.76□□□□□ -0.85
HDAC7-223ENST00000485796 SLURP1P55000 103 aa9.76□□□□□ -0.85
HDAC7-223ENST00000485796 EWSR1Q01844 656 aaKnown RBP eCLIP9.76□□□□□ -0.85
HDAC7-223ENST00000485796 NHLH2Q02577 135 aa9.76□□□□□ -0.85
HDAC7-223ENST00000485796 SLC38A11Q08AI6 406 aa9.76□□□□□ -0.85
HDAC7-223ENST00000485796 HAPLN4Q86UW8 402 aa9.76□□□□□ -0.85
HDAC7-223ENST00000485796 CACNG8Q8WXS5 425 aa9.76□□□□□ -0.85
HDAC7-223ENST00000485796 NPIPB3Q92617 1050 aa9.76□□□□□ -0.85
HDAC7-223ENST00000485796 DPF1Q92782 380 aa9.76□□□□□ -0.85
HDAC7-223ENST00000485796 DNAH3Q8TD57 4116 aa9.75□□□□□ -0.85
HDAC7-223ENST00000485796 G3V3Q6 166 aa9.75□□□□□ -0.85
HDAC7-223ENST00000485796 M0QZ24 198 aa9.75□□□□□ -0.85
HDAC7-223ENST00000485796 HBG1P69891 147 aa9.75□□□□□ -0.85
HDAC7-223ENST00000485796 HBG2P69892 147 aa9.75□□□□□ -0.85
HDAC7-223ENST00000485796 DLK1P80370 383 aa9.75□□□□□ -0.85
HDAC7-223ENST00000485796 FHL3Q13643 280 aa9.75□□□□□ -0.85
HDAC7-223ENST00000485796 GAMTQ14353 236 aa9.75□□□□□ -0.85
HDAC7-223ENST00000485796 FAM209BQ5JX69 171 aa9.75□□□□□ -0.85
HDAC7-223ENST00000485796 ACOT7LQ6ZUV0 252 aa9.75□□□□□ -0.85
HDAC7-223ENST00000485796 ZNF546Q86UE3 836 aa9.75□□□□□ -0.85
HDAC7-223ENST00000485796 LILRB2Q8N423 598 aa9.75□□□□□ -0.85
HDAC7-223ENST00000485796 OR4X1Q8NH49 305 aa9.75□□□□□ -0.85
HDAC7-223ENST00000485796 BSCL2Q96G97 398 aaPredicted RBP9.75□□□□□ -0.85
HDAC7-223ENST00000485796 TXN2Q99757 166 aa9.75□□□□□ -0.85
HDAC7-223ENST00000485796 CHRDL1Q9BU40 450 aa9.75□□□□□ -0.85
HDAC7-223ENST00000485796 GAR1Q9NY12 217 aaKnown RBP9.75□□□□□ -0.85
HDAC7-223ENST00000485796 IGHV3-35A0A0C4DH35 117 aa9.74□□□□□ -0.85
HDAC7-223ENST00000485796 LINC01619G3V211 115 aa9.74□□□□□ -0.85
HDAC7-223ENST00000485796 TGOLN2O43493 480 aa9.74□□□□□ -0.85
HDAC7-223ENST00000485796 CLN5O75503 358 aa9.74□□□□□ -0.85
HDAC7-223ENST00000485796 SCAF4O95104 1147 aaKnown RBP9.74□□□□□ -0.85
HDAC7-223ENST00000485796 S100A11P31949 105 aa9.74□□□□□ -0.85
HDAC7-223ENST00000485796 ADMP35318 185 aa9.74□□□□□ -0.85
HDAC7-223ENST00000485796 MYCNOSP40205 109 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms