RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 LYZL2Q7Z4W2 148 aa9.64□□□□□ -0.87
HDAC1-209ENST00000484305 OR10C1Q96KK4 312 aa9.64□□□□□ -0.87
HDAC1-209ENST00000484305 HEYLQ9NQ87 328 aaPredicted RBP9.64□□□□□ -0.87
HDAC1-209ENST00000484305 MRPL36Q9P0J6 103 aaKnown RBP9.64□□□□□ -0.87
HDAC1-209ENST00000484305 SMPXQ9UHP9 88 aa9.64□□□□□ -0.87
HDAC1-209ENST00000484305 IGHV3-49A0A0A0MS15 119 aa9.63□□□□□ -0.87
HDAC1-209ENST00000484305 A0A0B4J2A0 478 aa9.63□□□□□ -0.87
HDAC1-209ENST00000484305 IGHV7-4-1A0A0J9YVY3 117 aa9.63□□□□□ -0.87
HDAC1-209ENST00000484305 CEBPZOSA8MTT3 80 aa9.63□□□□□ -0.87
HDAC1-209ENST00000484305 CORTO00230 105 aa9.63□□□□□ -0.87
HDAC1-209ENST00000484305 TMEM50AO95807 157 aa9.63□□□□□ -0.87
HDAC1-209ENST00000484305 SULT1A3P0DMM9 295 aa9.63□□□□□ -0.87
HDAC1-209ENST00000484305 SULT1A4P0DMN0 295 aa9.63□□□□□ -0.87
HDAC1-209ENST00000484305 OPRK1P41145 380 aa9.63□□□□□ -0.87
HDAC1-209ENST00000484305 NMSQ5H8A3 153 aa9.63□□□□□ -0.87
HDAC1-209ENST00000484305 SPANXN2Q5MJ10 180 aa9.63□□□□□ -0.87
HDAC1-209ENST00000484305 LAMTOR1Q6IAA8 161 aa9.63□□□□□ -0.87
HDAC1-209ENST00000484305 TMED4Q7Z7H5 227 aa9.63□□□□□ -0.87
HDAC1-209ENST00000484305 TMEM116Q8NCL8 245 aa9.63□□□□□ -0.87
HDAC1-209ENST00000484305 CITED4Q96RK1 184 aa9.63□□□□□ -0.87
HDAC1-209ENST00000484305 RNF2Q99496 336 aa9.63□□□□□ -0.87
HDAC1-209ENST00000484305 SPAG8Q99932 426 aaPredicted RBP9.63□□□□□ -0.87
HDAC1-209ENST00000484305 SRRQ9GZT4 340 aa9.63□□□□□ -0.87
HDAC1-209ENST00000484305 HIPK2Q9H2X6 1198 aa9.63□□□□□ -0.87
HDAC1-209ENST00000484305 RETNQ9HD89 108 aa9.63□□□□□ -0.87
HDAC1-209ENST00000484305 SHPKQ9UHJ6 478 aa9.63□□□□□ -0.87
HDAC1-209ENST00000484305 KMT2CQ8NEZ4 4911 aaKnown RBP9.62□□□□□ -0.87
HDAC1-209ENST00000484305 IGHV3OR16-13A0A075B7E8 117 aa9.62□□□□□ -0.87
HDAC1-209ENST00000484305 TRAV14DV4A0A0A6YYC5 116 aa9.62□□□□□ -0.87
HDAC1-209ENST00000484305 IGHV3-74A0A0B4J1X5 117 aa9.62□□□□□ -0.87
HDAC1-209ENST00000484305 CHEK1O14757 476 aa9.62□□□□□ -0.87
HDAC1-209ENST00000484305 ANXA3P12429 323 aa9.62□□□□□ -0.87
HDAC1-209ENST00000484305 HTR2BP41595 481 aa9.62□□□□□ -0.87
HDAC1-209ENST00000484305 C2orf83Q53S99 150 aa9.62□□□□□ -0.87
HDAC1-209ENST00000484305 TMEM128Q5BJH2 165 aa9.62□□□□□ -0.87
HDAC1-209ENST00000484305 TOMM20LQ6UXN7 152 aa9.62□□□□□ -0.87
HDAC1-209ENST00000484305 MUC7Q8TAX7 377 aa9.62□□□□□ -0.87
HDAC1-209ENST00000484305 TMEM170AQ8WVE7 144 aa9.62□□□□□ -0.87
HDAC1-209ENST00000484305 RHPN1-AS1Q9BWJ2 59 aa9.62□□□□□ -0.87
HDAC1-209ENST00000484305 UBQLN2Q9UHD9 624 aa9.62□□□□□ -0.87
HDAC1-209ENST00000484305 A0A1B0GU03 582 aa9.61□□□□□ -0.87
HDAC1-209ENST00000484305 C3orf84H3BNL1 204 aa9.61□□□□□ -0.87
HDAC1-209ENST00000484305 CLN5O75503 358 aa9.61□□□□□ -0.87
HDAC1-209ENST00000484305 CCR6P51684 374 aa9.61□□□□□ -0.87
HDAC1-209ENST00000484305 SRPXP78539 464 aa9.61□□□□□ -0.87
HDAC1-209ENST00000484305 SMCO1Q147U7 214 aa9.61□□□□□ -0.87
HDAC1-209ENST00000484305 BAK1Q16611 211 aa9.61□□□□□ -0.87
HDAC1-209ENST00000484305 ZNF600Q6ZNG1 722 aa9.61□□□□□ -0.87
HDAC1-209ENST00000484305 LGI3Q8N145 548 aa9.61□□□□□ -0.87
HDAC1-209ENST00000484305 OR4X1Q8NH49 305 aa9.61□□□□□ -0.87
HDAC1-209ENST00000484305 DEDD2Q8WXF8 326 aa9.61□□□□□ -0.87
HDAC1-209ENST00000484305 FAM110AQ9BQ89 295 aa9.61□□□□□ -0.87
HDAC1-209ENST00000484305 SLC25A21Q9BQT8 299 aaPredicted RBP9.61□□□□□ -0.87
HDAC1-209ENST00000484305 ZFAND3Q9H8U3 227 aa9.61□□□□□ -0.87
HDAC1-209ENST00000484305 EDA2RQ9HAV5 297 aa9.61□□□□□ -0.87
HDAC1-209ENST00000484305 PUS1Q9Y606 427 aaKnown RBP eCLIP9.61□□□□□ -0.87
HDAC1-209ENST00000484305 APOHP02749 345 aaPredicted RBP9.6□□□□□ -0.87
HDAC1-209ENST00000484305 VAMP1P23763 118 aa9.6□□□□□ -0.87
HDAC1-209ENST00000484305 TNFRSF9Q07011 255 aa9.6□□□□□ -0.87
HDAC1-209ENST00000484305 ODF3L2Q3SX64 289 aa9.6□□□□□ -0.87
HDAC1-209ENST00000484305 LILRB2Q8N423 598 aa9.6□□□□□ -0.87
HDAC1-209ENST00000484305 SLC24A4Q8NFF2 622 aa9.6□□□□□ -0.87
HDAC1-209ENST00000484305 SDHCQ99643 169 aaPredicted RBP9.6□□□□□ -0.87
HDAC1-209ENST00000484305 GINS3Q9BRX5 216 aa9.6□□□□□ -0.87
HDAC1-209ENST00000484305 RBKSQ9H477 322 aa9.6□□□□□ -0.87
HDAC1-209ENST00000484305 HSPB7Q9UBY9 170 aa9.6□□□□□ -0.87
HDAC1-209ENST00000484305 DNAH7Q8WXX0 4024 aa9.59□□□□□ -0.87
HDAC1-209ENST00000484305 IGKV3-7A0A075B6H7 116 aa9.59□□□□□ -0.87
HDAC1-209ENST00000484305 OR4C46A6NHA9 309 aa9.59□□□□□ -0.87
HDAC1-209ENST00000484305 IGKV1-17P01599 117 aa9.59□□□□□ -0.87
HDAC1-209ENST00000484305 NPY1RP25929 384 aa9.59□□□□□ -0.87
HDAC1-209ENST00000484305 PPP1R1AQ13522 171 aa9.59□□□□□ -0.87
HDAC1-209ENST00000484305 TIGITQ495A1 244 aa9.59□□□□□ -0.87
HDAC1-209ENST00000484305 CASC10Q5T4H9 136 aa9.59□□□□□ -0.87
HDAC1-209ENST00000484305 FAM90A2PQ658T7 463 aa9.59□□□□□ -0.87
HDAC1-209ENST00000484305 PRSS54Q6PEW0 395 aa9.59□□□□□ -0.87
HDAC1-209ENST00000484305 OR1S1Q8NH92 325 aa9.59□□□□□ -0.87
HDAC1-209ENST00000484305 RNASEH2CQ8TDP1 164 aaKnown RBP9.59□□□□□ -0.87
HDAC1-209ENST00000484305 DTD1Q8TEA8 209 aa9.59□□□□□ -0.87
HDAC1-209ENST00000484305 ST8SIA2Q92186 375 aa9.59□□□□□ -0.87
HDAC1-209ENST00000484305 GGTLC1Q9BX51 225 aa9.59□□□□□ -0.87
HDAC1-209ENST00000484305 CACFD1Q9UGQ2 172 aa9.59□□□□□ -0.87
HDAC1-209ENST00000484305 TRAV30A0A087WSZ9 112 aa9.58□□□□□ -0.88
HDAC1-209ENST00000484305 LOC102724200A0A096LPH7 203 aaPredicted RBP9.58□□□□□ -0.88
HDAC1-209ENST00000484305 IGHV3-66A0A0C4DH42 116 aa9.58□□□□□ -0.88
HDAC1-209ENST00000484305 DUXBA0A1W2PPF3 345 aa9.58□□□□□ -0.88
HDAC1-209ENST00000484305 RPS10-NUDT3A0A1W2PQS6 291 aa9.58□□□□□ -0.88
HDAC1-209ENST00000484305 SFT2D2O95562 160 aa9.58□□□□□ -0.88
HDAC1-209ENST00000484305 IFNA10P01566 189 aa9.58□□□□□ -0.88
HDAC1-209ENST00000484305 TFPI2P48307 235 aa9.58□□□□□ -0.88
HDAC1-209ENST00000484305 INPP1P49441 399 aa9.58□□□□□ -0.88
HDAC1-209ENST00000484305 RND2P52198 227 aa9.58□□□□□ -0.88
HDAC1-209ENST00000484305 RBMS2Q15434 407 aaKnown RBP9.58□□□□□ -0.88
HDAC1-209ENST00000484305 TRIQKQ629K1 86 aa9.58□□□□□ -0.88
HDAC1-209ENST00000484305 TCF24Q7RTU0 167 aa9.58□□□□□ -0.88
HDAC1-209ENST00000484305 CENPSQ8N2Z9 138 aa9.58□□□□□ -0.88
HDAC1-209ENST00000484305 LRTM2Q8N967 370 aa9.58□□□□□ -0.88
HDAC1-209ENST00000484305 VSIRQ9H7M9 311 aa9.58□□□□□ -0.88
HDAC1-209ENST00000484305 LINC00854A0A1B0GVQ3 168 aa9.57□□□□□ -0.88
HDAC1-209ENST00000484305 PITX3O75364 302 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms