RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 RNASEKQ6P5S7 137 aaKnown RBP11.66□□□□□ -0.54
NR1H3-220ENST00000481020 SLC25A48Q6ZT89 311 aaKnown RBP11.66□□□□□ -0.54
NR1H3-220ENST00000481020 RNASE8Q8TDE3 154 aaKnown RBP11.66□□□□□ -0.54
NR1H3-220ENST00000481020 PMCHL2Q9BQD1 86 aa11.66□□□□□ -0.54
NR1H3-220ENST00000481020 ZNF430Q9H8G1 570 aaPredicted RBP11.66□□□□□ -0.54
NR1H3-220ENST00000481020 ZNF355PQ9NSJ1 428 aa11.66□□□□□ -0.54
NR1H3-220ENST00000481020 HIGD1CA8MV81 97 aa11.65□□□□□ -0.54
NR1H3-220ENST00000481020 PATE3B3GLJ2 98 aa11.65□□□□□ -0.54
NR1H3-220ENST00000481020 IGHV3-13P01766 116 aa11.65□□□□□ -0.54
NR1H3-220ENST00000481020 LIPFP07098 398 aa11.65□□□□□ -0.54
NR1H3-220ENST00000481020 C10orf113Q5VZT2 155 aa11.65□□□□□ -0.54
NR1H3-220ENST00000481020 UNQ5815/PRO19632Q6UWF5 114 aa11.65□□□□□ -0.54
NR1H3-220ENST00000481020 THAP8Q8NA92 274 aa11.65□□□□□ -0.54
NR1H3-220ENST00000481020 OR2Z1Q8NG97 314 aa11.65□□□□□ -0.54
NR1H3-220ENST00000481020 VSTM2AQ8TAG5 236 aa11.65□□□□□ -0.54
NR1H3-220ENST00000481020 GPR82Q96P67 336 aa11.65□□□□□ -0.54
NR1H3-220ENST00000481020 HINT2Q9BX68 163 aa11.65□□□□□ -0.54
NR1H3-220ENST00000481020 PLSCR4Q9NRQ2 329 aa11.65□□□□□ -0.54
NR1H3-220ENST00000481020 NDUFA4L2Q9NRX3 87 aa11.65□□□□□ -0.54
NR1H3-220ENST00000481020 LOC105371242A0A075B767 164 aa11.64□□□□□ -0.55
NR1H3-220ENST00000481020 TCRBV4S1A1TA0A5B7 111 aa11.64□□□□□ -0.55
NR1H3-220ENST00000481020 TFF1P04155 84 aa11.64□□□□□ -0.55
NR1H3-220ENST00000481020 LCN12Q6JVE5 192 aa11.64□□□□□ -0.55
NR1H3-220ENST00000481020 FAM71F2Q6NXP2 309 aa11.64□□□□□ -0.55
NR1H3-220ENST00000481020 C1orf229Q6ZS94 237 aaPredicted RBP11.64□□□□□ -0.55
NR1H3-220ENST00000481020 LYG1Q8N1E2 194 aa11.64□□□□□ -0.55
NR1H3-220ENST00000481020 OR9G1Q8NH87 305 aa11.64□□□□□ -0.55
NR1H3-220ENST00000481020 NDFIP1Q9BT67 221 aa11.64□□□□□ -0.55
NR1H3-220ENST00000481020 PRSS22Q9GZN4 317 aa11.64□□□□□ -0.55
NR1H3-220ENST00000481020 CNTRLQ7Z7A1 2325 aa11.64□□□□□ -0.55
NR1H3-220ENST00000481020 TRAV34A0A0B4J273 112 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 OR4C46A6NHA9 309 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 SYS1-DBNDD2H3BUS1 97 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 APOA2P02652 100 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 GDF5OSQ5U4N7 250 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 SLC25A34Q6PIV7 304 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 DEFB125Q8N687 156 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 FAM168AQ92567 244 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 FMC1Q96HJ9 113 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 RPP21Q9H633 154 aaKnown RBP11.63□□□□□ -0.55
NR1H3-220ENST00000481020 RPUSD1Q9UJJ7 312 aaKnown RBP11.63□□□□□ -0.55
NR1H3-220ENST00000481020 DOCK10Q96BY6 2186 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 IGHV1-18A0A0C4DH31 117 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 CT45A6P0DMU7 189 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 CT45A5P0DMU8 189 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 CT45A7P0DMV0 189 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 KIR2DL2P43627 348 aaPredicted RBP11.63□□□□□ -0.55
NR1H3-220ENST00000481020 RPL8P62917 257 aaKnown RBP11.63□□□□□ -0.55
NR1H3-220ENST00000481020 ETFRF1Q6IPR1 90 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 ZNF833PQ6ZTB9 187 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 FXYD5Q96DB9 178 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 PERPQ96FX8 193 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 MLST8Q9BVC4 326 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 HSPB8Q9UJY1 196 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 EPDR1Q9UM22 224 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 PPIAL4AQ9Y536 164 aa11.63□□□□□ -0.55
NR1H3-220ENST00000481020 PRR33A8MZF0 331 aa11.62□□□□□ -0.55
NR1H3-220ENST00000481020 C22orf46C9J442 243 aa11.62□□□□□ -0.55
NR1H3-220ENST00000481020 CA1P00915 261 aaPredicted RBP11.62□□□□□ -0.55
NR1H3-220ENST00000481020 SP9P0CG40 484 aa11.62□□□□□ -0.55
NR1H3-220ENST00000481020 C21orf62-AS1Q17RA5 79 aa11.62□□□□□ -0.55
NR1H3-220ENST00000481020 TMEM177Q53S58 311 aa11.62□□□□□ -0.55
NR1H3-220ENST00000481020 RNFT1Q5M7Z0 435 aa11.62□□□□□ -0.55
NR1H3-220ENST00000481020 FAM120AOSQ5T036 256 aa11.62□□□□□ -0.55
NR1H3-220ENST00000481020 SMIM15Q7Z3B0 74 aa11.62□□□□□ -0.55
NR1H3-220ENST00000481020 PDPNQ86YL7 162 aa11.62□□□□□ -0.55
NR1H3-220ENST00000481020 ATOH7Q8N100 152 aa11.62□□□□□ -0.55
NR1H3-220ENST00000481020 ZNRF1Q8ND25 227 aa11.62□□□□□ -0.55
NR1H3-220ENST00000481020 DPF1Q92782 380 aa11.62□□□□□ -0.55
NR1H3-220ENST00000481020 PLPPR2Q96GM1 343 aa11.62□□□□□ -0.55
NR1H3-220ENST00000481020 SSBP3Q9BWW4 388 aaPredicted RBP11.62□□□□□ -0.55
NR1H3-220ENST00000481020 SDK1Q7Z5N4 2213 aa11.62□□□□□ -0.55
NR1H3-220ENST00000481020 AGFG2O95081 481 aa11.61□□□□□ -0.55
NR1H3-220ENST00000481020 LEPROTL1O95214 131 aa11.61□□□□□ -0.55
NR1H3-220ENST00000481020 SAA1P0DJI8 122 aaPredicted RBP11.61□□□□□ -0.55
NR1H3-220ENST00000481020 VAMP3Q15836 100 aa11.61□□□□□ -0.55
NR1H3-220ENST00000481020 TMEM167AQ8TBQ9 72 aa11.61□□□□□ -0.55
NR1H3-220ENST00000481020 MAP1LC3CQ9BXW4 147 aa11.61□□□□□ -0.55
NR1H3-220ENST00000481020 HCFC1P51610 2035 aa11.61□□□□□ -0.55
NR1H3-220ENST00000481020 ZDBF2Q9HCK1 2354 aa11.61□□□□□ -0.55
NR1H3-220ENST00000481020 TRBV6-1A0A0K0K1D8 114 aa11.6□□□□□ -0.55
NR1H3-220ENST00000481020 A0A1B0GW15 77 aa11.6□□□□□ -0.55
NR1H3-220ENST00000481020 SRRM4A7MD48 611 aaKnown RBP11.6□□□□□ -0.55
NR1H3-220ENST00000481020 CD5LO43866 347 aa11.6□□□□□ -0.55
NR1H3-220ENST00000481020 FSTL3O95633 263 aa11.6□□□□□ -0.55
NR1H3-220ENST00000481020 HIST1H1AQ02539 215 aaPredicted RBP11.6□□□□□ -0.55
NR1H3-220ENST00000481020 MAJINQ3KP22 176 aa11.6□□□□□ -0.55
NR1H3-220ENST00000481020 RBPMS2Q6ZRY4 209 aaKnown RBP11.6□□□□□ -0.55
NR1H3-220ENST00000481020 SSX8Q7RTT4 187 aa11.6□□□□□ -0.55
NR1H3-220ENST00000481020 SPATA12Q7Z6I5 190 aa11.6□□□□□ -0.55
NR1H3-220ENST00000481020 C8orf31Q8N9H6 132 aa11.6□□□□□ -0.55
NR1H3-220ENST00000481020 C5orf17Q8NAS9 161 aa11.6□□□□□ -0.55
NR1H3-220ENST00000481020 RNF7Q9UBF6 113 aa11.6□□□□□ -0.55
NR1H3-220ENST00000481020 TET2Q6N021 2002 aaPredicted RBP11.6□□□□□ -0.55
NR1H3-220ENST00000481020 hADV38S2A0JD32 116 aa11.6□□□□□ -0.55
NR1H3-220ENST00000481020 C19orf71A6NCJ1 209 aa11.6□□□□□ -0.55
NR1H3-220ENST00000481020 LTAP01374 205 aa11.6□□□□□ -0.55
NR1H3-220ENST00000481020 GATA2P23769 480 aaPredicted RBP11.6□□□□□ -0.55
NR1H3-220ENST00000481020 GLRXP35754 106 aa11.6□□□□□ -0.55
NR1H3-220ENST00000481020 HOXA4Q00056 320 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms