RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 SUB1P53999 127 aaKnown RBP eCLIP13.77□□□□□ -0.211e-7■■■■■ 35.4
ABCF3-214ENST00000480562 ABHD1Q96SE0 405 aa13.77□□□□□ -0.21
ABCF3-214ENST00000480562 COPZ2Q9P299 210 aa13.77□□□□□ -0.21
ABCF3-214ENST00000480562 MTFP1Q9UDX5 166 aa13.77□□□□□ -0.21
ABCF3-214ENST00000480562 RABAC1Q9UI14 185 aa13.77□□□□□ -0.21
ABCF3-214ENST00000480562 DNAH6Q9C0G6 4158 aa13.76□□□□□ -0.21
ABCF3-214ENST00000480562 ATG12O94817 140 aa13.76□□□□□ -0.21
ABCF3-214ENST00000480562 NPPCP23582 126 aa13.76□□□□□ -0.21
ABCF3-214ENST00000480562 TMEM187Q14656 261 aa13.76□□□□□ -0.21
ABCF3-214ENST00000480562 SCGB2B2Q4G0G5 96 aa13.76□□□□□ -0.21
ABCF3-214ENST00000480562 OR13C8Q8NGS7 320 aa13.76□□□□□ -0.21
ABCF3-214ENST00000480562 RNASE11Q8TAA1 199 aaKnown RBP13.76□□□□□ -0.21
ABCF3-214ENST00000480562 C11orf68Q9H3H3 251 aaKnown RBP13.76□□□□□ -0.21
ABCF3-214ENST00000480562 TMEM231Q9H6L2 316 aa13.76□□□□□ -0.21
ABCF3-214ENST00000480562 ENY2Q9NPA8 101 aa13.76□□□□□ -0.21
ABCF3-214ENST00000480562 TRAV2A0A0B4J234 112 aa13.75□□□□□ -0.21
ABCF3-214ENST00000480562 CORTO00230 105 aa13.75□□□□□ -0.21
ABCF3-214ENST00000480562 CLN5O75503 358 aa13.75□□□□□ -0.21
ABCF3-214ENST00000480562 ZNF182P17025 639 aaPredicted RBP13.75□□□□□ -0.21
ABCF3-214ENST00000480562 TBPP20226 339 aa13.75□□□□□ -0.21
ABCF3-214ENST00000480562 UCP1P25874 307 aa13.75□□□□□ -0.21
ABCF3-214ENST00000480562 OPRK1P41145 380 aa13.75□□□□□ -0.21
ABCF3-214ENST00000480562 RBMS2Q15434 407 aaKnown RBP13.75□□□□□ -0.21
ABCF3-214ENST00000480562 CTF1Q16619 201 aa13.75□□□□□ -0.21
ABCF3-214ENST00000480562 LGALS9CQ6DKI2 356 aa13.75□□□□□ -0.21
ABCF3-214ENST00000480562 Q6ZRM9 215 aa13.75□□□□□ -0.21
ABCF3-214ENST00000480562 CCDC71LQ8N9Z2 235 aa13.75□□□□□ -0.21
ABCF3-214ENST00000480562 TERB2Q8NHR7 220 aa13.75□□□□□ -0.21
ABCF3-214ENST00000480562 ZFAND1Q8TCF1 268 aa13.75□□□□□ -0.21
ABCF3-214ENST00000480562 MARCH1Q8TCQ1 289 aa13.75□□□□□ -0.21
ABCF3-214ENST00000480562 AP3S1Q92572 193 aa13.75□□□□□ -0.21
ABCF3-214ENST00000480562 RRNAD1Q96FB5 475 aaKnown RBP13.75□□□□□ -0.21
ABCF3-214ENST00000480562 MFFQ9GZY8 342 aa13.75□□□□□ -0.21
ABCF3-214ENST00000480562 IFNA4P05014 189 aa13.74□□□□□ -0.21
ABCF3-214ENST00000480562 TIGITQ495A1 244 aa13.74□□□□□ -0.21
ABCF3-214ENST00000480562 STHQ8IWL8 128 aa13.74□□□□□ -0.21
ABCF3-214ENST00000480562 TMEM229BQ8NBD8 167 aa13.74□□□□□ -0.21
ABCF3-214ENST00000480562 STXBP6Q8NFX7 210 aa13.74□□□□□ -0.21
ABCF3-214ENST00000480562 OR4X1Q8NH49 305 aa13.74□□□□□ -0.21
ABCF3-214ENST00000480562 TMEM230Q96A57 120 aa13.74□□□□□ -0.21
ABCF3-214ENST00000480562 METTL26Q96S19 204 aa13.74□□□□□ -0.21
ABCF3-214ENST00000480562 A0A1W2PS18 150 aa13.73□□□□□ -0.21
ABCF3-214ENST00000480562 GABARAPO95166 117 aa13.73□□□□□ -0.21
ABCF3-214ENST00000480562 RAB3DO95716 219 aa13.73□□□□□ -0.21
ABCF3-214ENST00000480562 CD74P04233 296 aa13.73□□□□□ -0.21
ABCF3-214ENST00000480562 CRYBB3P26998 211 aa13.73□□□□□ -0.21
ABCF3-214ENST00000480562 P2RY1P47900 373 aa13.73□□□□□ -0.21
ABCF3-214ENST00000480562 TAS2R19P59542 299 aa13.73□□□□□ -0.21
ABCF3-214ENST00000480562 AGRNO00468 2067 aa13.72□□□□□ -0.21
ABCF3-214ENST00000480562 KNCNA6PVL3 124 aa13.72□□□□□ -0.21
ABCF3-214ENST00000480562 K7EQG2 157 aa13.72□□□□□ -0.21
ABCF3-214ENST00000480562 IGKV1-17P01599 117 aa13.72□□□□□ -0.21
ABCF3-214ENST00000480562 GIG44P09565 113 aaPredicted RBP13.72□□□□□ -0.21
ABCF3-214ENST00000480562 RPL5P46777 297 aaKnown RBP13.72□□□□□ -0.21
ABCF3-214ENST00000480562 BSXQ3C1V8 233 aa13.72□□□□□ -0.21
ABCF3-214ENST00000480562 FAAP20Q6NZ36 180 aa13.72□□□□□ -0.21
ABCF3-214ENST00000480562 STEAP1BQ6NZ63 245 aa13.72□□□□□ -0.21
ABCF3-214ENST00000480562 OR5AC1P0C628 307 aa13.71□□□□□ -0.21
ABCF3-214ENST00000480562 ZNF688P0C7X2 276 aa13.71□□□□□ -0.21
ABCF3-214ENST00000480562 SMIM18P0DKX4 95 aa13.71□□□□□ -0.21
ABCF3-214ENST00000480562 SPCS3P61009 180 aa13.71□□□□□ -0.21
ABCF3-214ENST00000480562 GPR107Q5VW38 600 aa13.71□□□□□ -0.21
ABCF3-214ENST00000480562 TRPT1Q86TN4 253 aaKnown RBP13.71□□□□□ -0.21
ABCF3-214ENST00000480562 LHFPL5Q8TAF8 219 aa13.71□□□□□ -0.21
ABCF3-214ENST00000480562 RTBDNQ9BSG5 229 aaPredicted RBP13.71□□□□□ -0.21
ABCF3-214ENST00000480562 TMEM222Q9H0R3 208 aa13.71□□□□□ -0.21
ABCF3-214ENST00000480562 MIXL1Q9H2W2 232 aa13.71□□□□□ -0.21
ABCF3-214ENST00000480562 CDS2O95674 445 aa13.7□□□□□ -0.22
ABCF3-214ENST00000480562 Q8NAQ8 132 aa13.7□□□□□ -0.22
ABCF3-214ENST00000480562 C2CD4CQ8TF44 421 aa13.7□□□□□ -0.22
ABCF3-214ENST00000480562 GLYATL2Q8WU03 294 aa13.7□□□□□ -0.22
ABCF3-214ENST00000480562 C15orf40Q8WUR7 153 aa13.7□□□□□ -0.22
ABCF3-214ENST00000480562 HEYLQ9NQ87 328 aaPredicted RBP13.7□□□□□ -0.22
ABCF3-214ENST00000480562 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.7□□□□□ -0.22
ABCF3-214ENST00000480562 C14orf166Q9Y224 244 aaKnown RBP13.7□□□□□ -0.22
ABCF3-214ENST00000480562 TEX13DA0A0J9YY54 714 aaPredicted RBP13.69□□□□□ -0.22
ABCF3-214ENST00000480562 GABARAPH6UMI1 98 aa13.69□□□□□ -0.22
ABCF3-214ENST00000480562 SCGB2A1O75556 95 aa13.69□□□□□ -0.22
ABCF3-214ENST00000480562 B3GALNT1O75752 331 aa13.69□□□□□ -0.22
ABCF3-214ENST00000480562 RBMY1A1P0DJD3 496 aaKnown RBP13.69□□□□□ -0.22
ABCF3-214ENST00000480562 RBMY1CP0DJD4 496 aa13.69□□□□□ -0.22
ABCF3-214ENST00000480562 C4BPBP20851 252 aa13.69□□□□□ -0.22
ABCF3-214ENST00000480562 HTR2BP41595 481 aa13.69□□□□□ -0.22
ABCF3-214ENST00000480562 RND2P52198 227 aa13.69□□□□□ -0.22
ABCF3-214ENST00000480562 PRR20EP86478 221 aa13.69□□□□□ -0.22
ABCF3-214ENST00000480562 PRR20CP86479 221 aa13.69□□□□□ -0.22
ABCF3-214ENST00000480562 PRR20DP86480 221 aa13.69□□□□□ -0.22
ABCF3-214ENST00000480562 PRR20BP86481 221 aa13.69□□□□□ -0.22
ABCF3-214ENST00000480562 PRR20AP86496 221 aa13.69□□□□□ -0.22
ABCF3-214ENST00000480562 RBMY1FQ15415 496 aaKnown RBP13.69□□□□□ -0.22
ABCF3-214ENST00000480562 AARDQ4LEZ3 155 aa13.69□□□□□ -0.22
ABCF3-214ENST00000480562 SELENOHQ8IZQ5 122 aaKnown RBP13.69□□□□□ -0.22
ABCF3-214ENST00000480562 DCANP1Q8TF63 244 aa13.69□□□□□ -0.22
ABCF3-214ENST00000480562 GPR146Q96CH1 333 aa13.69□□□□□ -0.22
ABCF3-214ENST00000480562 GRAMD2BQ96HH9 432 aa13.69□□□□□ -0.22
ABCF3-214ENST00000480562 NARS2Q96I59 477 aaKnown RBP13.69□□□□□ -0.22
ABCF3-214ENST00000480562 NAA60Q9H7X0 242 aa13.69□□□□□ -0.22
ABCF3-214ENST00000480562 CACNG5Q9UF02 275 aa13.69□□□□□ -0.22
ABCF3-214ENST00000480562 TRAV30A0A087WSZ9 112 aa13.68□□□□□ -0.22
ABCF3-214ENST00000480562 IGHV4-28A0A0C4DH34 117 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms