RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 DHRS2Q13268 280 aa11.48□□□□□ -0.57
DDX56-210ENST00000479440 H2BFWTQ7Z2G1 175 aa11.48□□□□□ -0.57
DDX56-210ENST00000479440 TMEM50AO95807 157 aa11.47□□□□□ -0.57
DDX56-210ENST00000479440 S100GP29377 79 aa11.47□□□□□ -0.57
DDX56-210ENST00000479440 EMP1P54849 157 aa11.47□□□□□ -0.57
DDX56-210ENST00000479440 SNRPD3P62318 126 aaKnown RBP11.47□□□□□ -0.57
DDX56-210ENST00000479440 TNP2Q05952 138 aa11.47□□□□□ -0.57
DDX56-210ENST00000479440 SLC25A38Q96DW6 304 aa11.47□□□□□ -0.57
DDX56-210ENST00000479440 NIPSNAP3BQ9BS92 247 aa11.47□□□□□ -0.57
DDX56-210ENST00000479440 FXYD6Q9H0Q3 95 aa11.47□□□□□ -0.57
DDX56-210ENST00000479440 FAM212BQ9NTI7 297 aaPredicted RBP11.47□□□□□ -0.57
DDX56-210ENST00000479440 LRP1BQ9NZR2 4599 aa11.47□□□□□ -0.57
DDX56-210ENST00000479440 SMIM9A6NGZ8 99 aa11.46□□□□□ -0.57
DDX56-210ENST00000479440 EBAG9O00559 213 aa11.46□□□□□ -0.57
DDX56-210ENST00000479440 SNCAP37840 140 aa11.46□□□□□ -0.57
DDX56-210ENST00000479440 AP2S1P53680 142 aaPredicted RBP11.46□□□□□ -0.57
DDX56-210ENST00000479440 ZNF705AQ6ZN79 300 aaPredicted RBP11.46□□□□□ -0.57
DDX56-210ENST00000479440 TMEM230Q96A57 120 aa11.46□□□□□ -0.57
DDX56-210ENST00000479440 AUNIPQ9H7T9 357 aa11.46□□□□□ -0.57
DDX56-210ENST00000479440 DIABLOQ9NR28 239 aa11.46□□□□□ -0.57
DDX56-210ENST00000479440 TXNL4BQ9NX01 149 aaKnown RBP11.46□□□□□ -0.57
DDX56-210ENST00000479440 BLOC1S6Q9UL45 172 aa11.46□□□□□ -0.57
DDX56-210ENST00000479440 TMED3Q9Y3Q3 217 aa11.46□□□□□ -0.57
DDX56-210ENST00000479440 RFNGQ9Y644 331 aa11.46□□□□□ -0.57
DDX56-210ENST00000479440 MEIS3P1A6NDR6 274 aa11.45□□□□□ -0.58
DDX56-210ENST00000479440 ZNF705FA8MVS1 300 aaPredicted RBP11.45□□□□□ -0.58
DDX56-210ENST00000479440 CLN5O75503 358 aa11.45□□□□□ -0.58
DDX56-210ENST00000479440 ZNF705DP0CH99 300 aaPredicted RBP11.45□□□□□ -0.58
DDX56-210ENST00000479440 ZNF705BP0CI00 300 aaPredicted RBP11.45□□□□□ -0.58
DDX56-210ENST00000479440 HTN3P15516 51 aa11.45□□□□□ -0.58
DDX56-210ENST00000479440 PPP5CP53041 499 aa11.45□□□□□ -0.58
DDX56-210ENST00000479440 AQP4P55087 323 aa11.45□□□□□ -0.58
DDX56-210ENST00000479440 HSPE1P61604 102 aaKnown RBP11.45□□□□□ -0.58
DDX56-210ENST00000479440 DHRS11Q6UWP2 260 aa11.45□□□□□ -0.58
DDX56-210ENST00000479440 SLC35G3Q8N808 338 aa11.45□□□□□ -0.58
DDX56-210ENST00000479440 SEC22AQ96IW7 307 aa11.45□□□□□ -0.58
DDX56-210ENST00000479440 SCRT2Q9NQ03 307 aa11.45□□□□□ -0.58
DDX56-210ENST00000479440 H3BMM0 161 aa11.44□□□□□ -0.58
DDX56-210ENST00000479440 OPRK1P41145 380 aa11.44□□□□□ -0.58
DDX56-210ENST00000479440 SUB1P53999 127 aaKnown RBP eCLIP11.44□□□□□ -0.58
DDX56-210ENST00000479440 PHLDA2Q53GA4 152 aa11.44□□□□□ -0.58
DDX56-210ENST00000479440 FAM222AQ5U5X8 452 aa11.44□□□□□ -0.58
DDX56-210ENST00000479440 C15orf53Q8NAA6 179 aa11.44□□□□□ -0.58
DDX56-210ENST00000479440 OR5H2Q8NGV7 314 aa11.44□□□□□ -0.58
DDX56-210ENST00000479440 MRGPRFQ96AM1 343 aa11.44□□□□□ -0.58
DDX56-210ENST00000479440 SEPSECSQ9HD40 501 aaKnown RBP11.44□□□□□ -0.58
DDX56-210ENST00000479440 DKK2Q9UBU2 259 aa11.44□□□□□ -0.58
DDX56-210ENST00000479440 INS-IGF2F8WCM5 200 aa11.43□□□□□ -0.58
DDX56-210ENST00000479440 HLA-DRB4P13762 266 aa11.43□□□□□ -0.58
DDX56-210ENST00000479440 RFX2P48378 723 aa11.43□□□□□ -0.58
DDX56-210ENST00000479440 TAS2R46P59540 309 aa11.43□□□□□ -0.58
DDX56-210ENST00000479440 OXA1LQ15070 435 aa11.43□□□□□ -0.58
DDX56-210ENST00000479440 SPINK9Q5DT21 86 aa11.43□□□□□ -0.58
DDX56-210ENST00000479440 TMEM88Q6PEY1 159 aa11.43□□□□□ -0.58
DDX56-210ENST00000479440 C6orf223Q8N319 242 aa11.43□□□□□ -0.58
DDX56-210ENST00000479440 OR5H6Q8NGV6 325 aa11.43□□□□□ -0.58
DDX56-210ENST00000479440 OR4X1Q8NH49 305 aa11.43□□□□□ -0.58
DDX56-210ENST00000479440 GLMPQ8WWB7 406 aa11.43□□□□□ -0.58
DDX56-210ENST00000479440 ATG101Q9BSB4 218 aa11.43□□□□□ -0.58
DDX56-210ENST00000479440 HLA-DRB4X5D2U9 266 aa11.43□□□□□ -0.58
DDX56-210ENST00000479440 AGRNO00468 2067 aa11.43□□□□□ -0.58
DDX56-210ENST00000479440 IGHV3OR16-12A0A075B7B8 117 aa11.42□□□□□ -0.58
DDX56-210ENST00000479440 FAM90A26D6RGX4 464 aa11.42□□□□□ -0.58
DDX56-210ENST00000479440 PMP2P02689 132 aa11.42□□□□□ -0.58
DDX56-210ENST00000479440 HNRNPCP07910 306 aaKnown RBP eCLIP11.42□□□□□ -0.58
DDX56-210ENST00000479440 LPCAT3Q6P1A2 487 aa11.42□□□□□ -0.58
DDX56-210ENST00000479440 TBC1D26Q86UD7 250 aa11.42□□□□□ -0.58
DDX56-210ENST00000479440 OR6F1Q8NGZ6 308 aa11.42□□□□□ -0.58
DDX56-210ENST00000479440 PDCD10Q9BUL8 212 aa11.42□□□□□ -0.58
DDX56-210ENST00000479440 NRN1Q9NPD7 142 aa11.42□□□□□ -0.58
DDX56-210ENST00000479440 SSR3Q9UNL2 185 aa11.42□□□□□ -0.58
DDX56-210ENST00000479440 TRAV30A0A087WSZ9 112 aa11.41□□□□□ -0.58
DDX56-210ENST00000479440 HOXA1P49639 335 aaPredicted RBP11.41□□□□□ -0.58
DDX56-210ENST00000479440 IDNKQ5T6J7 187 aa11.41□□□□□ -0.58
DDX56-210ENST00000479440 C16orf54Q6UWD8 224 aa11.41□□□□□ -0.58
DDX56-210ENST00000479440 YTHDF1Q9BYJ9 559 aaKnown RBP11.41□□□□□ -0.58
DDX56-210ENST00000479440 ANAPC10Q9UM13 185 aa11.41□□□□□ -0.58
DDX56-210ENST00000479440 NBDYA0A0U1RRE5 68 aa11.4□□□□□ -0.58
DDX56-210ENST00000479440 IGKV1-39P01597 117 aa11.4□□□□□ -0.58
DDX56-210ENST00000479440 IGKV1D-39P04432 117 aa11.4□□□□□ -0.58
DDX56-210ENST00000479440 PSMB9P28065 219 aa11.4□□□□□ -0.58
DDX56-210ENST00000479440 SDC2P34741 201 aa11.4□□□□□ -0.58
DDX56-210ENST00000479440 NKX2-1P43699 371 aaPredicted RBP11.4□□□□□ -0.58
DDX56-210ENST00000479440 MXD1Q05195 221 aa11.4□□□□□ -0.58
DDX56-210ENST00000479440 ENY2Q9NPA8 101 aa11.4□□□□□ -0.58
DDX56-210ENST00000479440 U3KQE9 123 aa11.4□□□□□ -0.58
DDX56-210ENST00000479440 APOBP04114 4563 aaKnown RBP11.4□□□□□ -0.58
DDX56-210ENST00000479440 RPS10-NUDT3A0A1W2PQS6 291 aa11.39□□□□□ -0.59
DDX56-210ENST00000479440 GSTZ1O43708 216 aaPredicted RBP11.39□□□□□ -0.59
DDX56-210ENST00000479440 IGKV1-17P01599 117 aa11.39□□□□□ -0.59
DDX56-210ENST00000479440 RNASE2P10153 161 aaKnown RBP11.39□□□□□ -0.59
DDX56-210ENST00000479440 RPL5P46777 297 aaKnown RBP11.39□□□□□ -0.59
DDX56-210ENST00000479440 DAD1P61803 113 aa11.39□□□□□ -0.59
DDX56-210ENST00000479440 TIGITQ495A1 244 aa11.39□□□□□ -0.59
DDX56-210ENST00000479440 Q8WTZ3 238 aa11.39□□□□□ -0.59
DDX56-210ENST00000479440 FNDC4Q9H6D8 234 aaPredicted RBP11.39□□□□□ -0.59
DDX56-210ENST00000479440 MRPL36Q9P0J6 103 aaKnown RBP11.39□□□□□ -0.59
DDX56-210ENST00000479440 GOLT1BQ9Y3E0 138 aa11.39□□□□□ -0.59
DDX56-210ENST00000479440 HERC1Q15751 4861 aa11.39□□□□□ -0.59
DDX56-210ENST00000479440 NACAE9PAV3 2078 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms