RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 PAX8Q06710 450 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 FOXF1Q12946 379 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 DIAPH2-AS1Q14236 149 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 LDLRAD1Q5T700 205 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 B9D2Q9BPU9 175 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 TRAV24A0A0B4J272 114 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 A0A0G2JMM0 328 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 A0A1B0GUS0 222 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 A0A1W2PPB8 328 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 KIR3DP1A8MWS1 328 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 WNT2P09544 360 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 MINOS1Q5TGZ0 78 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 CD300LDQ6UXZ3 194 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 CXorf67Q86X51 503 aaPredicted RBP4.6□□□□□ -1.67
USF3-202ENST00000478658 SLC25A39Q9BZJ4 359 aaPredicted RBP4.6□□□□□ -1.67
USF3-202ENST00000478658 Q9H3A6 140 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 VSIRQ9H7M9 311 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 MINOS1-NBL1R4GNA1 71 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.6□□□□□ -1.67
USF3-202ENST00000478658 IFI6P09912 130 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 ZNF362Q5T0B9 420 aaPredicted RBP4.6□□□□□ -1.67
USF3-202ENST00000478658 HILPDAQ9Y5L2 63 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 CACNA1IQ9P0X4 2223 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 ATOX1O00244 68 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 HMGN4O00479 90 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 SLC25A53Q5H9E4 307 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 TMEM179BQ7Z7N9 219 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 MRGPRFQ96AM1 343 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 PLXND1Q9Y4D7 1925 aa4.6□□□□□ -1.67
USF3-202ENST00000478658 A0A1W2PNR3 127 aa4.59□□□□□ -1.67
USF3-202ENST00000478658 DAD1P61803 113 aa4.59□□□□□ -1.67
USF3-202ENST00000478658 LINC00305Q7Z4B0 112 aa4.59□□□□□ -1.67
USF3-202ENST00000478658 VKORC1Q9BQB6 163 aa4.59□□□□□ -1.67
USF3-202ENST00000478658 TBC1D29Q9UFV1 150 aa4.59□□□□□ -1.67
USF3-202ENST00000478658 CNRIP1Q96F85 164 aaPredicted RBP4.59□□□□□ -1.67
USF3-202ENST00000478658 FOXA2Q9Y261 457 aaPredicted RBP4.59□□□□□ -1.67
USF3-202ENST00000478658 NEUROG3Q9Y4Z2 214 aa4.59□□□□□ -1.67
USF3-202ENST00000478658 STRCP1A6NGW2 1772 aa4.59□□□□□ -1.67
USF3-202ENST00000478658 STRCQ7RTU9 1775 aa4.59□□□□□ -1.67
USF3-202ENST00000478658 VWC2Q2TAL6 325 aa4.59□□□□□ -1.67
USF3-202ENST00000478658 SH2D5Q6ZV89 423 aa4.59□□□□□ -1.67
USF3-202ENST00000478658 SHPRHQ149N8 1683 aa4.59□□□□□ -1.67
USF3-202ENST00000478658 G3V2L1 256 aa4.59□□□□□ -1.67
USF3-202ENST00000478658 ACP7Q6ZNF0 438 aa4.59□□□□□ -1.67
USF3-202ENST00000478658 R3HDMLQ9H3Y0 253 aa4.59□□□□□ -1.67
USF3-202ENST00000478658 IL36BQ9NZH7 164 aa4.59□□□□□ -1.67
USF3-202ENST00000478658 ABCA3Q99758 1704 aa4.59□□□□□ -1.67
USF3-202ENST00000478658 PYCARD-AS1I3L0S3 204 aa4.59□□□□□ -1.67
USF3-202ENST00000478658 HERV-K104P63124 156 aa4.59□□□□□ -1.67
USF3-202ENST00000478658 DGCR2P98153 550 aa4.59□□□□□ -1.67
USF3-202ENST00000478658 LYPD1Q8N2G4 141 aa4.59□□□□□ -1.67
USF3-202ENST00000478658 MRPS18AQ9NVS2 196 aaKnown RBP4.59□□□□□ -1.67
USF3-202ENST00000478658 BRWD1Q9NSI6 2320 aa4.59□□□□□ -1.68
USF3-202ENST00000478658 POM121BA6NF01 834 aa4.59□□□□□ -1.68
USF3-202ENST00000478658 METTL12A8MUP2 240 aa4.59□□□□□ -1.68
USF3-202ENST00000478658 NDUFC1O43677 76 aa4.59□□□□□ -1.68
USF3-202ENST00000478658 AZU1P20160 251 aa4.59□□□□□ -1.68
USF3-202ENST00000478658 LIMS1P48059 325 aa4.59□□□□□ -1.68
USF3-202ENST00000478658 REG1BP48304 166 aa4.59□□□□□ -1.68
USF3-202ENST00000478658 FOXA1P55317 472 aa4.59□□□□□ -1.68
USF3-202ENST00000478658 RBM38Q9H0Z9 239 aaKnown RBP4.59□□□□□ -1.68
USF3-202ENST00000478658 PSME4Q14997 1843 aa4.59□□□□□ -1.68
USF3-202ENST00000478658 A0A087WWC5 75 aa4.59□□□□□ -1.68
USF3-202ENST00000478658 A8MXK9 166 aa4.59□□□□□ -1.68
USF3-202ENST00000478658 TIMP3P35625 211 aa4.59□□□□□ -1.68
USF3-202ENST00000478658 EMDP50402 254 aa4.59□□□□□ -1.68
USF3-202ENST00000478658 FAM214BQ7L5A3 538 aa4.59□□□□□ -1.68
USF3-202ENST00000478658 TMEM222Q9H0R3 208 aa4.59□□□□□ -1.68
USF3-202ENST00000478658 BRCA1P38398 1863 aaKnown RBP4.59□□□□□ -1.68
USF3-202ENST00000478658 A0A0B4J2E0 115 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 A0A1B0GX12 115 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 PPP1R32Q7Z5V6 425 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 LILRA3Q8N6C8 439 aaPredicted RBP4.58□□□□□ -1.68
USF3-202ENST00000478658 C11orf44Q8N8P7 122 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 NAA38Q9BRA0 125 aaKnown RBP4.58□□□□□ -1.68
USF3-202ENST00000478658 PRYO14603 147 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 SAP30O75446 220 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 TMEM170AQ8WVE7 144 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 SCARF2Q96GP6 870 aaPredicted RBP4.58□□□□□ -1.68
USF3-202ENST00000478658 OSTCQ9NRP0 149 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 ZNF706Q9Y5V0 76 aaPredicted RBP4.58□□□□□ -1.68
USF3-202ENST00000478658 ETDCA0A1B0GVM5 59 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 MARCH11A6NNE9 402 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 CRYBB2P43320 205 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 ANKRD39Q53RE8 183 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 C14orf132Q9NPU4 83 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 FBXL7Q9UJT9 491 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 PSPNO60542 156 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 OCIAD2Q56VL3 154 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 TPTE2P1Q5T6R2 138 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 IFI27L1Q96BM0 104 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 NBEAP1P0C6P0 100 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 DMRTA1Q5VZB9 504 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 C9orf139Q6ZV77 190 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 PRIMA1Q86XR5 153 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 DEFB125Q8N687 156 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 ORMDL1Q9P0S3 153 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 YBX2Q9Y2T7 364 aaKnown RBP4.58□□□□□ -1.68
USF3-202ENST00000478658 NDUFB4O95168 129 aa4.58□□□□□ -1.68
USF3-202ENST00000478658 LINC00614P0C842 121 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms