RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 OR8B3Q8NGG8 313 aa9.82□□□□□ -0.84
PTPRF-212ENST00000477970 OR8B2Q96RD0 313 aa9.82□□□□□ -0.84
PTPRF-212ENST00000477970 ELOVL1Q9BW60 279 aa9.82□□□□□ -0.84
PTPRF-212ENST00000477970 OR51M1Q9H341 326 aa9.82□□□□□ -0.84
PTPRF-212ENST00000477970 IGKV1D-37A0A075B6S9 117 aa9.82□□□□□ -0.84
PTPRF-212ENST00000477970 IGHV1-3A0A0C4DH29 117 aa9.82□□□□□ -0.84
PTPRF-212ENST00000477970 S100A2P29034 98 aa9.82□□□□□ -0.84
PTPRF-212ENST00000477970 TEX38Q6PEX7 206 aa9.82□□□□□ -0.84
PTPRF-212ENST00000477970 FAM167A-AS1Q96KT0 104 aa9.82□□□□□ -0.84
PTPRF-212ENST00000477970 RAB1BQ9H0U4 201 aa9.82□□□□□ -0.84
PTPRF-212ENST00000477970 CBLN4Q9NTU7 201 aa9.82□□□□□ -0.84
PTPRF-212ENST00000477970 PSG5Q15238 335 aa9.81□□□□□ -0.84
PTPRF-212ENST00000477970 TMEM183AQ8IXX5 376 aa9.81□□□□□ -0.84
PTPRF-212ENST00000477970 NEU4Q8WWR8 484 aaPredicted RBP9.81□□□□□ -0.84
PTPRF-212ENST00000477970 TMEM37Q8WXS4 190 aa9.81□□□□□ -0.84
PTPRF-212ENST00000477970 FNDC4Q9H6D8 234 aaPredicted RBP9.81□□□□□ -0.84
PTPRF-212ENST00000477970 DNAJC4Q9NNZ3 241 aa9.81□□□□□ -0.84
PTPRF-212ENST00000477970 PPIAL4CA0A0B4J2A2 164 aa9.81□□□□□ -0.84
PTPRF-212ENST00000477970 SLC25A17O43808 307 aa9.81□□□□□ -0.84
PTPRF-212ENST00000477970 SOD3P08294 240 aa9.81□□□□□ -0.84
PTPRF-212ENST00000477970 PPIAL4GP0DN37 164 aa9.81□□□□□ -0.84
PTPRF-212ENST00000477970 BPIFB3P59826 476 aa9.81□□□□□ -0.84
PTPRF-212ENST00000477970 OCC1Q8TAD7 63 aa9.81□□□□□ -0.84
PTPRF-212ENST00000477970 SLC25A2Q9BXI2 301 aa9.81□□□□□ -0.84
PTPRF-212ENST00000477970 RPL15P61313 204 aaKnown RBP9.81□□□□□ -0.84
PTPRF-212ENST00000477970 NECAP1Q8NC96 275 aa9.81□□□□□ -0.84
PTPRF-212ENST00000477970 TRGV9Q99603 122 aa9.81□□□□□ -0.84
PTPRF-212ENST00000477970 SIGLEC9Q9Y336 463 aa9.81□□□□□ -0.84
PTPRF-212ENST00000477970 TENM4Q6N022 2769 aa9.8□□□□□ -0.84
PTPRF-212ENST00000477970 LIPFP07098 398 aa9.8□□□□□ -0.84
PTPRF-212ENST00000477970 GRNP28799 593 aaKnown RBP9.8□□□□□ -0.84
PTPRF-212ENST00000477970 OR10G8Q8NGN5 311 aa9.8□□□□□ -0.84
PTPRF-212ENST00000477970 OR1P1Q8NH06 330 aa9.8□□□□□ -0.84
PTPRF-212ENST00000477970 OR2T6Q8NHC8 308 aa9.8□□□□□ -0.84
PTPRF-212ENST00000477970 TMEM190Q8WZ59 177 aa9.8□□□□□ -0.84
PTPRF-212ENST00000477970 EAF1Q96JC9 268 aaPredicted RBP9.8□□□□□ -0.84
PTPRF-212ENST00000477970 A0A1W2PPQ1 181 aa9.8□□□□□ -0.84
PTPRF-212ENST00000477970 M0R1W7 72 aa9.8□□□□□ -0.84
PTPRF-212ENST00000477970 RPL27AP46776 148 aaKnown RBP9.8□□□□□ -0.84
PTPRF-212ENST00000477970 MLANAQ16655 118 aa9.8□□□□□ -0.84
PTPRF-212ENST00000477970 OR11H6Q8NGC7 330 aa9.8□□□□□ -0.84
PTPRF-212ENST00000477970 RITA1Q96K30 269 aa9.8□□□□□ -0.84
PTPRF-212ENST00000477970 GCN1Q92616 2671 aaKnown RBP9.8□□□□□ -0.84
PTPRF-212ENST00000477970 CTAG1AP78358 180 aa9.79□□□□□ -0.84
PTPRF-212ENST00000477970 TMEM116Q8NCL8 245 aa9.79□□□□□ -0.84
PTPRF-212ENST00000477970 TPSG1Q9NRR2 321 aa9.79□□□□□ -0.84
PTPRF-212ENST00000477970 IL36BQ9NZH7 164 aa9.79□□□□□ -0.84
PTPRF-212ENST00000477970 INSIG2Q9Y5U4 225 aa9.79□□□□□ -0.84
PTPRF-212ENST00000477970 K7EN84 100 aa9.79□□□□□ -0.84
PTPRF-212ENST00000477970 ACTL6BO94805 426 aa9.79□□□□□ -0.84
PTPRF-212ENST00000477970 PLP1P60201 277 aa9.79□□□□□ -0.84
PTPRF-212ENST00000477970 YPEL3P61236 119 aaPredicted RBP9.79□□□□□ -0.84
PTPRF-212ENST00000477970 C10orf55Q5SWW7 151 aa9.79□□□□□ -0.84
PTPRF-212ENST00000477970 DTX2Q86UW9 622 aa9.79□□□□□ -0.84
PTPRF-212ENST00000477970 STXBP6Q8NFX7 210 aa9.79□□□□□ -0.84
PTPRF-212ENST00000477970 TIMD4Q96H15 378 aa9.79□□□□□ -0.84
PTPRF-212ENST00000477970 PSMG3-AS1Q96PY0 264 aa9.79□□□□□ -0.84
PTPRF-212ENST00000477970 NIT2Q9NQR4 276 aa9.79□□□□□ -0.84
PTPRF-212ENST00000477970 MYO18BQ8IUG5 2567 aa9.78□□□□□ -0.84
PTPRF-212ENST00000477970 TAS2R60P59551 318 aa9.78□□□□□ -0.84
PTPRF-212ENST00000477970 C10orf113Q5VZT2 155 aa9.78□□□□□ -0.84
PTPRF-212ENST00000477970 GGTLC3B5MD39 225 aa9.78□□□□□ -0.84
PTPRF-212ENST00000477970 TEX22C9J3V5 150 aa9.78□□□□□ -0.84
PTPRF-212ENST00000477970 C1orf122Q6ZSJ8 110 aa9.78□□□□□ -0.84
PTPRF-212ENST00000477970 PPP1R27Q86WC6 154 aa9.78□□□□□ -0.84
PTPRF-212ENST00000477970 NPIPB3Q92617 1050 aa9.78□□□□□ -0.84
PTPRF-212ENST00000477970 GSN-AS1Q9NRJ2 163 aa9.78□□□□□ -0.84
PTPRF-212ENST00000477970 HELTA6NFD8 242 aa9.77□□□□□ -0.84
PTPRF-212ENST00000477970 COX7A2P2O60397 106 aa9.77□□□□□ -0.84
PTPRF-212ENST00000477970 OR7C2O60412 319 aa9.77□□□□□ -0.84
PTPRF-212ENST00000477970 GCGP01275 180 aa9.77□□□□□ -0.84
PTPRF-212ENST00000477970 GATA2P23769 480 aaPredicted RBP9.77□□□□□ -0.84
PTPRF-212ENST00000477970 PATE2Q6UY27 113 aa9.77□□□□□ -0.84
PTPRF-212ENST00000477970 KIR3DL3Q8N743 410 aa9.77□□□□□ -0.84
PTPRF-212ENST00000477970 C22orf15Q8WYQ4 148 aa9.77□□□□□ -0.84
PTPRF-212ENST00000477970 IGF2BP2-AS1Q96M15 143 aa9.77□□□□□ -0.84
PTPRF-212ENST00000477970 OSTCQ9NRP0 149 aa9.77□□□□□ -0.84
PTPRF-212ENST00000477970 F11RQ9Y624 299 aaKnown RBP9.77□□□□□ -0.84
PTPRF-212ENST00000477970 LYNX1G3V0Z9 82 aa9.77□□□□□ -0.85
PTPRF-212ENST00000477970 ENSAO43768 121 aaKnown RBP9.77□□□□□ -0.85
PTPRF-212ENST00000477970 FABP1P07148 127 aa9.77□□□□□ -0.85
PTPRF-212ENST00000477970 LYNX1P0DP58 116 aa9.77□□□□□ -0.85
PTPRF-212ENST00000477970 CDSNQ15517 529 aa9.77□□□□□ -0.85
PTPRF-212ENST00000477970 PYY3Q5JQD4 70 aa9.77□□□□□ -0.85
PTPRF-212ENST00000477970 TPTE2P1Q5T6R2 138 aa9.77□□□□□ -0.85
PTPRF-212ENST00000477970 SGMS2Q8NHU3 365 aa9.77□□□□□ -0.85
PTPRF-212ENST00000477970 RPEQ96AT9 228 aa9.77□□□□□ -0.85
PTPRF-212ENST00000477970 GPR61Q9BZJ8 451 aa9.77□□□□□ -0.85
PTPRF-212ENST00000477970 PGPEP1LA6NFU8 196 aa9.77□□□□□ -0.85
PTPRF-212ENST00000477970 ODF3BA8MYP8 253 aa9.77□□□□□ -0.85
PTPRF-212ENST00000477970 GNG4P50150 75 aa9.77□□□□□ -0.85
PTPRF-212ENST00000477970 SSBP2P81877 361 aaPredicted RBP9.77□□□□□ -0.85
PTPRF-212ENST00000477970 DMRT1Q9Y5R6 373 aa9.77□□□□□ -0.85
PTPRF-212ENST00000477970 SPTA1P02549 2419 aa9.77□□□□□ -0.85
PTPRF-212ENST00000477970 MFAP2P55001 183 aa9.76□□□□□ -0.85
PTPRF-212ENST00000477970 TNXAQ16473 311 aa9.76□□□□□ -0.85
PTPRF-212ENST00000477970 GFI1BQ5VTD9 330 aa9.76□□□□□ -0.85
PTPRF-212ENST00000477970 NPBQ8NG41 125 aa9.76□□□□□ -0.85
PTPRF-212ENST00000477970 HIST1H2BLQ99880 126 aa9.76□□□□□ -0.85
PTPRF-212ENST00000477970 HELZ2Q9BYK8 2649 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms