RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 HBA1P69905 142 aa1.93□□□□□ -2.1
SMNDC1-205ENST00000477763 ZNF117Q03924 483 aa1.93□□□□□ -2.1
SMNDC1-205ENST00000477763 OR8B8Q15620 311 aa1.93□□□□□ -2.1
SMNDC1-205ENST00000477763 MRPL51Q4U2R6 128 aaKnown RBP1.93□□□□□ -2.1
SMNDC1-205ENST00000477763 LYRM7Q5U5X0 104 aa1.93□□□□□ -2.1
SMNDC1-205ENST00000477763 OR13C4Q8NGS5 318 aa1.93□□□□□ -2.1
SMNDC1-205ENST00000477763 ISOC1Q96CN7 298 aa1.93□□□□□ -2.1
SMNDC1-205ENST00000477763 C2orf88Q9BSF0 95 aa1.93□□□□□ -2.1
SMNDC1-205ENST00000477763 RTL8AQ9BWD3 113 aa1.93□□□□□ -2.1
SMNDC1-205ENST00000477763 C11orf68Q9H3H3 251 aaKnown RBP1.93□□□□□ -2.1
SMNDC1-205ENST00000477763 SMDT1Q9H4I9 107 aa1.93□□□□□ -2.1
SMNDC1-205ENST00000477763 TMEM106BQ9NUM4 274 aa1.93□□□□□ -2.1
SMNDC1-205ENST00000477763 LAMTOR2Q9Y2Q5 125 aa1.93□□□□□ -2.1
SMNDC1-205ENST00000477763 AMMECR1Q9Y4X0 333 aaPredicted RBP1.93□□□□□ -2.1
SMNDC1-205ENST00000477763 CHD1O14646 1710 aa1.93□□□□□ -2.1
SMNDC1-205ENST00000477763 UHRF1BP1Q6BDS2 1440 aa1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 KIF13AQ9H1H9 1805 aa1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 MYO5BQ9ULV0 1848 aa1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 C5orf58C9J3I9 102 aa1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 PLA2G10O15496 165 aa1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 TPST1O60507 370 aa1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 IGHV3-30-3P0DP02 117 aa1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 RPL7P18124 248 aaKnown RBP1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 RPS3P23396 243 aaKnown RBP eCLIP1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 CCL20P78556 96 aa1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 WHAMMP3Q1A5X7 153 aa1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 MORN2Q502X0 79 aa1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 MGLLQ99685 303 aa1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 VPS25Q9BRG1 176 aa1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 UPK3BQ9BT76 320 aa1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 EFCAB1Q9HAE3 211 aa1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 PSORS1C2Q9UIG4 136 aa1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 HSPB8Q9UJY1 196 aa1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 MED31Q9Y3C7 131 aa1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 ROCK2O75116 1388 aaKnown RBP1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 MED23Q9ULK4 1368 aa1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 IFT140Q96RY7 1462 aa1.92□□□□□ -2.1
SMNDC1-205ENST00000477763 BCL9O00512 1426 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 DCAF1Q9Y4B6 1507 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 CFTRP13569 1480 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 ABCC10Q5T3U5 1492 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 A0A096LPI6 279 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 DHRS12A0PJE2 317 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 F8W036 122 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 UBE2L6O14933 153 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 BANF1O75531 89 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 NDUFB2O95178 105 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 UBBP0CG47 229 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 BCL2P10415 239 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 SLC25A16P16260 332 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 NPPCP23582 126 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 CCR2P41597 374 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 RAB13P51153 203 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 DEFA3P59666 94 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 DNAJB13P59910 316 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 FOXF1Q12946 379 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 LGALS9BQ3B8N2 356 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 LGALS9CQ6DKI2 356 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 RPL22L1Q6P5R6 122 aaKnown RBP1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 AMTNQ6UX39 209 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 KTN1-AS1Q86SY8 53 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 TMEM229BQ8NBD8 167 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 Q8NDZ9 215 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 OR51T1Q8NGJ9 327 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 CANT1Q8WVQ1 401 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 H1FXQ92522 213 aaKnown RBP1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 OR2J1Q9GZK6 312 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 TXNL4BQ9NX01 149 aaKnown RBP1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 CCL26Q9Y258 94 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 HMGXB3Q12766 1538 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 CLASP1Q7Z460 1538 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 TOPBP1Q92547 1522 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 PRG4Q92954 1404 aaPredicted RBP1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 CCDC171Q6TFL3 1326 aa1.91□□□□□ -2.1
SMNDC1-205ENST00000477763 YLPM1P49750 1951 aaKnown RBP1.9□□□□□ -2.1
SMNDC1-205ENST00000477763 A0A087WUU8 490 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 TRAV41A0A0B4J266 112 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 A0A0J9YX75 114 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 A0A1B0GV90 55 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 ODF3BA8MYP8 253 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 LY6LH3BQJ8 138 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 I3L521 148 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 UBFD1O14562 309 aaKnown RBP1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 CYB5BO43169 146 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 DLEU1O43261 78 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 IGKV1-5P01602 117 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 PRM2P04554 102 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 HTR1AP08908 422 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 SCTP09683 121 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 HIST1H2BOP23527 126 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 S100PP25815 95 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 CRYBB3P26998 211 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 CASP1P29466 404 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 SRIP30626 198 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 HIST1H2BBP33778 126 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 GABRA2P47869 451 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 HIST1H2BDP58876 126 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 TSPEAR-AS2P59090 65 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 HIST1H2BCP62807 126 aa1.9□□□□□ -2.11
SMNDC1-205ENST00000477763 HIST2H2BEQ16778 126 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms