RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 CFC1BP0CG36 223 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 HLA-GP17693 338 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 CTAG1AP78358 180 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 CDK5Q00535 292 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 INSL4Q14641 139 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 OR2B11Q5JQS5 317 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 RBM48Q5RL73 367 aaKnown RBP4.14□□□□□ -1.75
HDAC3-206ENST00000471968 FAM78BQ5VT40 261 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 GPR107Q5VW38 600 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 FOXI2Q6ZQN5 318 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 SLC51BQ86UW2 128 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 PARP16Q8N5Y8 322 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 ZNF555Q8NEP9 628 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 OR10W1Q8NGF6 305 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 VSTM2AQ8TAG5 236 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 C16orf74Q96GX8 76 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 LINC00052Q96N35 136 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 GPHA2Q96T91 129 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 TXN2Q99757 166 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 C9orf16Q9BUW7 83 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 RIMS4Q9H426 269 aaPredicted RBP4.14□□□□□ -1.75
HDAC3-206ENST00000471968 SCPEP1Q9HB40 452 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 CHMP1AQ9HD42 196 aaPredicted RBP4.14□□□□□ -1.75
HDAC3-206ENST00000471968 FRRS1LQ9P0K9 344 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 GNG8Q9UK08 70 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 MGAT4AQ9UM21 535 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 OAZ3Q9UMX2 235 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 RABL2BQ9UNT1 228 aa4.14□□□□□ -1.75
HDAC3-206ENST00000471968 ZNF98A6NK75 572 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 F6UB75 175 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 PTTG1O95997 202 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 INSP01308 110 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 IGHV3-48P01763 117 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 OR13C7P0DN81 318 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 GYPEP15421 78 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 ZNF182P17025 639 aaPredicted RBP4.13□□□□□ -1.75
HDAC3-206ENST00000471968 LORP23490 312 aaPredicted RBP4.13□□□□□ -1.75
HDAC3-206ENST00000471968 HTR2CP28335 458 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 DUTP33316 252 aaKnown RBP4.13□□□□□ -1.75
HDAC3-206ENST00000471968 DAPP51397 102 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 NANOS3P60323 173 aaKnown RBP4.13□□□□□ -1.75
HDAC3-206ENST00000471968 GABARAPL2P60520 117 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 IFITM2Q01629 132 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 DHODHQ02127 395 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 GPR176Q14439 515 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 ZNF79Q15937 498 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 TP53I3Q53FA7 332 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 IGSF11Q5DX21 431 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 OR2G6Q5TZ20 316 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 TTC23Q5W5X9 447 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 ZNF600Q6ZNG1 722 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 CCDC28AQ8IWP9 274 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 PUSL1Q8N0Z8 303 aaKnown RBP4.13□□□□□ -1.75
HDAC3-206ENST00000471968 LINC00612Q8N6U2 182 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 Q8N976 141 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 OR8J1Q8NGP2 316 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 ADTRPQ96IZ2 230 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 METTL26Q96S19 204 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 CIB1Q99828 191 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 SELENOIQ9C0D9 397 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 BANF2Q9H503 90 aa4.13□□□□□ -1.75
HDAC3-206ENST00000471968 RABL2AQ9UBK7 228 aaPredicted RBP4.13□□□□□ -1.75
HDAC3-206ENST00000471968 WARS2Q9UGM6 360 aaKnown RBP4.13□□□□□ -1.75
HDAC3-206ENST00000471968 A0A1B0GU03 582 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 DAPL1A0PJW8 107 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 FAM231BA6NCW3 169 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 ZAR1LA6NP61 321 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 TMEM14DPA8MWL7 114 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 M0R129 80 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 EI24O14681 340 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 PAX4O43316 350 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 PRKYO43930 277 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 GNG7O60262 68 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 PDCD6O75340 191 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 RLN2P04090 185 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 SERPINE2P07093 398 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 OR2T7P0C7T2 308 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 TRAPPC2P0DI81 140 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 TRAPPC2BP0DI82 140 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 SRMP19623 302 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 RCVRNP35243 200 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 ZNF93P35789 620 aaPredicted RBP4.12□□□□□ -1.75
HDAC3-206ENST00000471968 MFAP4P55083 255 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 B2MP61769 119 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 HLA-DRB3P79483 266 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 ZNF415Q09FC8 603 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 ZIK1Q3SY52 487 aaPredicted RBP4.12□□□□□ -1.75
HDAC3-206ENST00000471968 MEDAGQ5VYS4 303 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 SPINK6Q6UWN8 80 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 PRSS48Q7RTY5 328 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 NEGR1Q7Z3B1 354 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 TMEM144Q7Z5S9 345 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 MS4A15Q8N5U1 240 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 MOB3AQ96BX8 217 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 NARS2Q96I59 477 aaKnown RBP4.12□□□□□ -1.75
HDAC3-206ENST00000471968 LINC01587Q99440 93 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 AIFM2Q9BRQ8 373 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 GABARAPL1Q9H0R8 117 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 NRN1Q9NPD7 142 aa4.12□□□□□ -1.75
HDAC3-206ENST00000471968 TMA7Q9Y2S6 64 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms