RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 C2orf50Q96LR7 162 aa14.61□□□□□ -0.07
USP11-205ENST00000467378 FNDC4Q9H6D8 234 aaPredicted RBP14.61□□□□□ -0.07
USP11-205ENST00000467378 GSKIPQ9P0R6 139 aa14.61□□□□□ -0.07
USP11-205ENST00000467378 C7orf66A4D0T2 115 aa14.6□□□□□ -0.07
USP11-205ENST00000467378 C5orf51A6NDU8 294 aa14.6□□□□□ -0.07
USP11-205ENST00000467378 FAM25EA8MYX2 175 aa14.6□□□□□ -0.07
USP11-205ENST00000467378 WRBO00258 174 aa14.6□□□□□ -0.07
USP11-205ENST00000467378 OVOL1O14753 267 aa14.6□□□□□ -0.07
USP11-205ENST00000467378 GGCTO75223 188 aaKnown RBP14.6□□□□□ -0.07
USP11-205ENST00000467378 IFNA10P01566 189 aa14.6□□□□□ -0.07
USP11-205ENST00000467378 IGHV3-48P01763 117 aa14.6□□□□□ -0.07
USP11-205ENST00000467378 FCGR2BP31994 310 aaPredicted RBP14.6□□□□□ -0.07
USP11-205ENST00000467378 ATP5IP56385 69 aaPredicted RBP14.6□□□□□ -0.07
USP11-205ENST00000467378 TATDN3Q17R31 274 aa14.6□□□□□ -0.07
USP11-205ENST00000467378 RGS21Q2M5E4 152 aa14.6□□□□□ -0.07
USP11-205ENST00000467378 RPEL1Q2QD12 228 aa14.6□□□□□ -0.07
USP11-205ENST00000467378 GSG1LQ6UXU4 331 aa14.6□□□□□ -0.07
USP11-205ENST00000467378 NOXA1Q86UR1 476 aa14.6□□□□□ -0.07
USP11-205ENST00000467378 MUC7Q8TAX7 377 aa14.6□□□□□ -0.07
USP11-205ENST00000467378 CIB3Q96Q77 187 aaPredicted RBP14.6□□□□□ -0.07
USP11-205ENST00000467378 STAB2Q8WWQ8 2551 aa14.6□□□□□ -0.07
USP11-205ENST00000467378 OR2C1O95371 312 aa14.59□□□□□ -0.07
USP11-205ENST00000467378 GPR183P32249 361 aa14.59□□□□□ -0.07
USP11-205ENST00000467378 MFAP4P55083 255 aa14.59□□□□□ -0.07
USP11-205ENST00000467378 IL15RAQ13261 267 aa14.59□□□□□ -0.07
USP11-205ENST00000467378 RNASEH2CQ8TDP1 164 aaKnown RBP14.59□□□□□ -0.07
USP11-205ENST00000467378 TXN2Q99757 166 aa14.59□□□□□ -0.07
USP11-205ENST00000467378 OR2T8A6NH00 312 aa14.58□□□□□ -0.08
USP11-205ENST00000467378 C15orf62A8K5M9 175 aa14.58□□□□□ -0.08
USP11-205ENST00000467378 TGOLN2O43493 480 aa14.58□□□□□ -0.08
USP11-205ENST00000467378 LY86O95711 162 aa14.58□□□□□ -0.08
USP11-205ENST00000467378 SCGB1D2O95969 90 aa14.58□□□□□ -0.08
USP11-205ENST00000467378 MBPP02686 304 aaPredicted RBP14.58□□□□□ -0.08
USP11-205ENST00000467378 OPRK1P41145 380 aa14.58□□□□□ -0.08
USP11-205ENST00000467378 PAX9P55771 341 aa14.58□□□□□ -0.08
USP11-205ENST00000467378 OXA1LQ15070 435 aa14.58□□□□□ -0.08
USP11-205ENST00000467378 GPHB5Q86YW7 130 aa14.58□□□□□ -0.08
USP11-205ENST00000467378 BSCL2Q96G97 398 aaPredicted RBP14.58□□□□□ -0.08
USP11-205ENST00000467378 MCRIP2Q9BUT9 160 aaKnown RBP14.58□□□□□ -0.08
USP11-205ENST00000467378 ZC4H2Q9NQZ6 224 aa14.58□□□□□ -0.08
USP11-205ENST00000467378 MRPL36Q9P0J6 103 aaKnown RBP14.58□□□□□ -0.08
USP11-205ENST00000467378 ALG5Q9Y673 324 aa14.58□□□□□ -0.08
USP11-205ENST00000467378 GOSR2O14653 212 aa14.57□□□□□ -0.08
USP11-205ENST00000467378 SIX6O95475 246 aa14.57□□□□□ -0.08
USP11-205ENST00000467378 TMEM50AO95807 157 aa14.57□□□□□ -0.08
USP11-205ENST00000467378 CTSGP08311 255 aa14.57□□□□□ -0.08
USP11-205ENST00000467378 SYNJ2BPP57105 145 aa14.57□□□□□ -0.08
USP11-205ENST00000467378 Q56UQ5 140 aa14.57□□□□□ -0.08
USP11-205ENST00000467378 UBAC2Q8NBM4 344 aa14.57□□□□□ -0.08
USP11-205ENST00000467378 SMIM8Q96KF7 97 aa14.57□□□□□ -0.08
USP11-205ENST00000467378 CHRDL1Q9BU40 450 aa14.57□□□□□ -0.08
USP11-205ENST00000467378 LCE6AA0A183 80 aa14.56□□□□□ -0.08
USP11-205ENST00000467378 SSSCA1O60232 199 aa14.56□□□□□ -0.08
USP11-205ENST00000467378 ADMP35318 185 aa14.56□□□□□ -0.08
USP11-205ENST00000467378 ACSM6Q6P461 480 aa14.56□□□□□ -0.08
USP11-205ENST00000467378 SPSB3Q6PJ21 355 aa14.56□□□□□ -0.08
USP11-205ENST00000467378 ZNF414Q96IQ9 312 aa14.56□□□□□ -0.08
USP11-205ENST00000467378 OR4C12Q96R67 309 aa14.56□□□□□ -0.08
USP11-205ENST00000467378 ASCL2Q99929 193 aa14.56□□□□□ -0.08
USP11-205ENST00000467378 RCL1Q9Y2P8 373 aaKnown RBP14.56□□□□□ -0.08
USP11-205ENST00000467378 RPS10-NUDT3A0A1W2PQS6 291 aa14.55□□□□□ -0.08
USP11-205ENST00000467378 K7EPK0 472 aa14.55□□□□□ -0.08
USP11-205ENST00000467378 SSNA1O43805 119 aa14.55□□□□□ -0.08
USP11-205ENST00000467378 NPBWR1P48145 328 aa14.55□□□□□ -0.08
USP11-205ENST00000467378 RPP30P78346 268 aaKnown RBP14.55□□□□□ -0.08
USP11-205ENST00000467378 SPANXN5Q5MJ07 72 aa14.55□□□□□ -0.08
USP11-205ENST00000467378 OR4X1Q8NH49 305 aa14.55□□□□□ -0.08
USP11-205ENST00000467378 RAB40CQ96S21 281 aa14.55□□□□□ -0.08
USP11-205ENST00000467378 ZNF436Q9C0F3 470 aaPredicted RBP14.55□□□□□ -0.08
USP11-205ENST00000467378 PSENENQ9NZ42 101 aa14.55□□□□□ -0.08
USP11-205ENST00000467378 SACSQ9NZJ4 4579 aa14.55□□□□□ -0.08
USP11-205ENST00000467378 SEC14L6B5MCN3 397 aa14.54□□□□□ -0.08
USP11-205ENST00000467378 LGALS9O00182 355 aa14.54□□□□□ -0.08
USP11-205ENST00000467378 GNG7O60262 68 aa14.54□□□□□ -0.08
USP11-205ENST00000467378 CLN5O75503 358 aa14.54□□□□□ -0.08
USP11-205ENST00000467378 IFNA4P05014 189 aa14.54□□□□□ -0.08
USP11-205ENST00000467378 TAS2R30P59541 319 aa14.54□□□□□ -0.08
USP11-205ENST00000467378 RAB11AP62491 216 aa14.54□□□□□ -0.08
USP11-205ENST00000467378 C9orf66Q5T8R8 295 aa14.54□□□□□ -0.08
USP11-205ENST00000467378 ETFRF1Q6IPR1 90 aa14.54□□□□□ -0.08
USP11-205ENST00000467378 PRSS54Q6PEW0 395 aa14.54□□□□□ -0.08
USP11-205ENST00000467378 IL34Q6ZMJ4 242 aa14.54□□□□□ -0.08
USP11-205ENST00000467378 OR9G4Q8NGQ1 327 aa14.54□□□□□ -0.08
USP11-205ENST00000467378 ZMAT5Q9UDW3 170 aaKnown RBP14.54□□□□□ -0.08
USP11-205ENST00000467378 STRAPQ9Y3F4 350 aaKnown RBP14.54□□□□□ -0.08
USP11-205ENST00000467378 LSM5Q9Y4Y9 91 aaKnown RBP14.54□□□□□ -0.08
USP11-205ENST00000467378 IGHV3-35A0A0C4DH35 117 aa14.53□□□□□ -0.08
USP11-205ENST00000467378 PRSS46E5RG02 174 aa14.53□□□□□ -0.08
USP11-205ENST00000467378 H3BP45 60 aa14.53□□□□□ -0.08
USP11-205ENST00000467378 SLC25A4P12235 298 aa14.53□□□□□ -0.08
USP11-205ENST00000467378 GPX4P36969 197 aaPredicted RBP14.53□□□□□ -0.08
USP11-205ENST00000467378 H2BFSP57053 126 aa14.53□□□□□ -0.08
USP11-205ENST00000467378 RAB32Q13637 225 aa14.53□□□□□ -0.08
USP11-205ENST00000467378 FAM106AQ4KMX7 169 aa14.53□□□□□ -0.08
USP11-205ENST00000467378 WDR89Q96FK6 387 aaPredicted RBP14.53□□□□□ -0.08
USP11-205ENST00000467378 NMES1Q9C002 83 aa14.53□□□□□ -0.08
USP11-205ENST00000467378 C11orf1Q9H5F2 150 aa14.53□□□□□ -0.08
USP11-205ENST00000467378 PMS2P5A8MQ11 134 aa14.52□□□□□ -0.09
USP11-205ENST00000467378 NUPL2O15504 423 aaKnown RBP14.52□□□□□ -0.09
USP11-205ENST00000467378 TMEM14EPQ6UXP3 125 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms