RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ODF3L2Q3SX64 289 aa7.59□□□□□ -1.19
SF3A3-204ENST00000462258 PVRIGQ6DKI7 326 aa7.59□□□□□ -1.19
SF3A3-204ENST00000462258 Q6ZRM9 215 aa7.59□□□□□ -1.19
SF3A3-204ENST00000462258 TMEM116Q8NCL8 245 aa7.59□□□□□ -1.19
SF3A3-204ENST00000462258 OR52E5Q8NH55 327 aa7.59□□□□□ -1.19
SF3A3-204ENST00000462258 SCGB3A2Q96PL1 93 aa7.59□□□□□ -1.19
SF3A3-204ENST00000462258 GINS3Q9BRX5 216 aa7.59□□□□□ -1.19
SF3A3-204ENST00000462258 RBM38Q9H0Z9 239 aaKnown RBP7.59□□□□□ -1.19
SF3A3-204ENST00000462258 PRR13Q9NZ81 148 aa7.59□□□□□ -1.19
SF3A3-204ENST00000462258 SMPXQ9UHP9 88 aa7.59□□□□□ -1.19
SF3A3-204ENST00000462258 TMEM56-RWDD3S4R434 201 aa7.59□□□□□ -1.19
SF3A3-204ENST00000462258 V9GYH0 126 aa7.59□□□□□ -1.19
SF3A3-204ENST00000462258 LOC102724200A0A096LPH7 203 aaPredicted RBP7.58□□□□□ -1.2
SF3A3-204ENST00000462258 IGHV3-49A0A0A0MS15 119 aa7.58□□□□□ -1.2
SF3A3-204ENST00000462258 CHEK1O14757 476 aa7.58□□□□□ -1.2
SF3A3-204ENST00000462258 SCGB2A1O75556 95 aa7.58□□□□□ -1.2
SF3A3-204ENST00000462258 S100A5P33763 92 aa7.58□□□□□ -1.2
SF3A3-204ENST00000462258 AP3S2P59780 193 aa7.58□□□□□ -1.2
SF3A3-204ENST00000462258 KLF9Q13886 244 aaPredicted RBP7.58□□□□□ -1.2
SF3A3-204ENST00000462258 TMEM187Q14656 261 aa7.58□□□□□ -1.2
SF3A3-204ENST00000462258 PYDC2Q56P42 97 aa7.58□□□□□ -1.2
SF3A3-204ENST00000462258 ZFAND6Q6FIF0 208 aa7.58□□□□□ -1.2
SF3A3-204ENST00000462258 TOMM20LQ6UXN7 152 aa7.58□□□□□ -1.2
SF3A3-204ENST00000462258 ZNF600Q6ZNG1 722 aa7.58□□□□□ -1.2
SF3A3-204ENST00000462258 IL22RA2Q969J5 263 aa7.58□□□□□ -1.2
SF3A3-204ENST00000462258 GPR146Q96CH1 333 aa7.58□□□□□ -1.2
SF3A3-204ENST00000462258 GALNT14Q96FL9 552 aa7.58□□□□□ -1.2
SF3A3-204ENST00000462258 RNF2Q99496 336 aa7.58□□□□□ -1.2
SF3A3-204ENST00000462258 RHPN1-AS1Q9BWJ2 59 aa7.58□□□□□ -1.2
SF3A3-204ENST00000462258 FNDC4Q9H6D8 234 aaPredicted RBP7.58□□□□□ -1.2
SF3A3-204ENST00000462258 ZFAND3Q9H8U3 227 aa7.58□□□□□ -1.2
SF3A3-204ENST00000462258 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.58□□□□□ -1.2
SF3A3-204ENST00000462258 PUS1Q9Y606 427 aaKnown RBP eCLIP7.58□□□□□ -1.2
SF3A3-204ENST00000462258 PLECQ15149 4684 aaKnown RBP7.58□□□□□ -1.2
SF3A3-204ENST00000462258 IGHV3OR16-13A0A075B7E8 117 aa7.57□□□□□ -1.2
SF3A3-204ENST00000462258 TRAV14DV4A0A0A6YYC5 116 aa7.57□□□□□ -1.2
SF3A3-204ENST00000462258 IGHV3-74A0A0B4J1X5 117 aa7.57□□□□□ -1.2
SF3A3-204ENST00000462258 CEBPZOSA8MTT3 80 aa7.57□□□□□ -1.2
SF3A3-204ENST00000462258 NXPH3O95157 252 aa7.57□□□□□ -1.2
SF3A3-204ENST00000462258 SULT1A3P0DMM9 295 aa7.57□□□□□ -1.2
SF3A3-204ENST00000462258 SULT1A4P0DMN0 295 aa7.57□□□□□ -1.2
SF3A3-204ENST00000462258 ANXA3P12429 323 aa7.57□□□□□ -1.2
SF3A3-204ENST00000462258 AKR1C4P17516 323 aa7.57□□□□□ -1.2
SF3A3-204ENST00000462258 BMI1P35226 326 aa7.57□□□□□ -1.2
SF3A3-204ENST00000462258 HTR2BP41595 481 aa7.57□□□□□ -1.2
SF3A3-204ENST00000462258 SUPT4H1P63272 117 aaKnown RBP7.57□□□□□ -1.2
SF3A3-204ENST00000462258 ZNF79Q15937 498 aa7.57□□□□□ -1.2
SF3A3-204ENST00000462258 TOMM5Q8N4H5 51 aa7.57□□□□□ -1.2
SF3A3-204ENST00000462258 SLC24A4Q8NFF2 622 aa7.57□□□□□ -1.2
SF3A3-204ENST00000462258 HEYLQ9NQ87 328 aaPredicted RBP7.57□□□□□ -1.2
SF3A3-204ENST00000462258 MRPL36Q9P0J6 103 aaKnown RBP7.57□□□□□ -1.2
SF3A3-204ENST00000462258 KCNIP3Q9Y2W7 256 aa7.57□□□□□ -1.2
SF3A3-204ENST00000462258 DNAH1Q9P2D7 4330 aa7.56□□□□□ -1.2
SF3A3-204ENST00000462258 IGKV3-7A0A075B6H7 116 aa7.56□□□□□ -1.2
SF3A3-204ENST00000462258 A0A0B4J2A0 478 aa7.56□□□□□ -1.2
SF3A3-204ENST00000462258 RPS10-NUDT3A0A1W2PQS6 291 aa7.56□□□□□ -1.2
SF3A3-204ENST00000462258 CLN5O75503 358 aa7.56□□□□□ -1.2
SF3A3-204ENST00000462258 TMEM50AO95807 157 aa7.56□□□□□ -1.2
SF3A3-204ENST00000462258 TFPI2P48307 235 aa7.56□□□□□ -1.2
SF3A3-204ENST00000462258 APOC4P55056 127 aa7.56□□□□□ -1.2
SF3A3-204ENST00000462258 SRPXP78539 464 aa7.56□□□□□ -1.2
SF3A3-204ENST00000462258 NMSQ5H8A3 153 aa7.56□□□□□ -1.2
SF3A3-204ENST00000462258 TMED4Q7Z7H5 227 aa7.56□□□□□ -1.2
SF3A3-204ENST00000462258 OR4X1Q8NH49 305 aa7.56□□□□□ -1.2
SF3A3-204ENST00000462258 ST8SIA2Q92186 375 aa7.56□□□□□ -1.2
SF3A3-204ENST00000462258 SHPKQ9UHJ6 478 aa7.56□□□□□ -1.2
SF3A3-204ENST00000462258 A0A1B0GU03 582 aa7.55□□□□□ -1.2
SF3A3-204ENST00000462258 ZNF701M0R085 212 aaPredicted RBP7.55□□□□□ -1.2
SF3A3-204ENST00000462258 NPY1RP25929 384 aa7.55□□□□□ -1.2
SF3A3-204ENST00000462258 CCR6P51684 374 aa7.55□□□□□ -1.2
SF3A3-204ENST00000462258 SMCO1Q147U7 214 aa7.55□□□□□ -1.2
SF3A3-204ENST00000462258 C2orf83Q53S99 150 aa7.55□□□□□ -1.2
SF3A3-204ENST00000462258 TCF24Q7RTU0 167 aa7.55□□□□□ -1.2
SF3A3-204ENST00000462258 LYZL2Q7Z4W2 148 aa7.55□□□□□ -1.2
SF3A3-204ENST00000462258 CCDC190Q86UF4 302 aa7.55□□□□□ -1.2
SF3A3-204ENST00000462258 LGI3Q8N145 548 aa7.55□□□□□ -1.2
SF3A3-204ENST00000462258 RNASEH2CQ8TDP1 164 aaKnown RBP7.55□□□□□ -1.2
SF3A3-204ENST00000462258 DEDD2Q8WXF8 326 aa7.55□□□□□ -1.2
SF3A3-204ENST00000462258 TMEM231Q9H6L2 316 aa7.55□□□□□ -1.2
SF3A3-204ENST00000462258 VSIRQ9H7M9 311 aa7.55□□□□□ -1.2
SF3A3-204ENST00000462258 CACFD1Q9UGQ2 172 aa7.55□□□□□ -1.2
SF3A3-204ENST00000462258 ALMS1Q8TCU4 4167 aa7.55□□□□□ -1.2
SF3A3-204ENST00000462258 PIGBOS1A0A0B4J2F0 54 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 IGHV3-66A0A0C4DH42 116 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 IGKV1-17P01599 117 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 APOHP02749 345 aaPredicted RBP7.54□□□□□ -1.2
SF3A3-204ENST00000462258 CD5P06127 495 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 SLC25A4P12235 298 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 VAMP1P23763 118 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 RND2P52198 227 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 TNFRSF9Q07011 255 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 DEFB135Q30KP9 77 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 TIGITQ495A1 244 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 SPANXN2Q5MJ10 180 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 FAM90A2PQ658T7 463 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 PRSS54Q6PEW0 395 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 APRG1Q8IVJ8 170 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 GBGT1Q8N5D6 347 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 OR1S2Q8NGQ3 325 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 DTD1Q8TEA8 209 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms