RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 C16orf92Q96LL3 132 aa5.42□□□□□ -1.54
MSH2-204ENST00000461394 OR4F4Q96R69 305 aa5.42□□□□□ -1.54
MSH2-204ENST00000461394 SLC25A33Q9BSK2 321 aa5.42□□□□□ -1.54
MSH2-204ENST00000461394 FAM103A1Q9BTL3 118 aaKnown RBP5.42□□□□□ -1.54
MSH2-204ENST00000461394 C20orf24Q9BUV8 137 aa5.42□□□□□ -1.54
MSH2-204ENST00000461394 TMPRSS5Q9H3S3 457 aa5.42□□□□□ -1.54
MSH2-204ENST00000461394 RPS10P5Q9NQ39 176 aa5.42□□□□□ -1.54
MSH2-204ENST00000461394 DOK5Q9P104 306 aa5.42□□□□□ -1.54
MSH2-204ENST00000461394 FBXL7Q9UJT9 491 aa5.42□□□□□ -1.54
MSH2-204ENST00000461394 PUS1Q9Y606 427 aaKnown RBP eCLIP5.42□□□□□ -1.54
MSH2-204ENST00000461394 F11RQ9Y624 299 aaKnown RBP5.42□□□□□ -1.54
MSH2-204ENST00000461394 SPTBN1Q01082 2364 aaKnown RBP5.42□□□□□ -1.54
MSH2-204ENST00000461394 NBEAQ8NFP9 2946 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 TPRP12270 2363 aaKnown RBP5.41□□□□□ -1.54
MSH2-204ENST00000461394 SEC14L6B5MCN3 397 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 TSPAN4O14817 238 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 PAGE4O60829 102 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 OR5G3P0C626 314 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 LINC00869P0C866 280 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 ARL14EPLP0DKL9 152 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 PLA2G2AP14555 144 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 GATA2P23769 480 aaPredicted RBP5.41□□□□□ -1.54
MSH2-204ENST00000461394 NPBWR1P48145 328 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 TAS2R45P59539 299 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 HABP2Q14520 560 aaPredicted RBP5.41□□□□□ -1.54
MSH2-204ENST00000461394 C9orf152Q5JTZ5 239 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 FAM209BQ5JX69 171 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 C10orf91Q5T1B1 145 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 FAM78BQ5VT40 261 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 CDPF1Q6NVV7 123 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 CYB561D1Q8N8Q1 229 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 LINC01356Q8N9X3 169 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 ZNF114Q8NC26 417 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 OR1L6Q8NGR2 347 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 OR1L4Q8NGR5 311 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 OR4X1Q8NH49 305 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 RNF2Q99496 336 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 SRSF8Q9BRL6 282 aaKnown RBP5.41□□□□□ -1.54
MSH2-204ENST00000461394 NIPSNAP3BQ9BS92 247 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 FNDC4Q9H6D8 234 aaPredicted RBP5.41□□□□□ -1.54
MSH2-204ENST00000461394 TNFRSF19Q9NS68 423 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 ZNF355PQ9NSJ1 428 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 AP5S1Q9NUS5 200 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 BEX4Q9NWD9 120 aaPredicted RBP5.41□□□□□ -1.54
MSH2-204ENST00000461394 HIF1ANQ9NWT6 349 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 TECRQ9NZ01 308 aaKnown RBP5.41□□□□□ -1.54
MSH2-204ENST00000461394 SLC45A2Q9UMX9 530 aa5.41□□□□□ -1.54
MSH2-204ENST00000461394 LSM4Q9Y4Z0 139 aaKnown RBP5.41□□□□□ -1.54
MSH2-204ENST00000461394 A0A0U1RQK1 487 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 TCRBV4S1A1TA0A5B7 111 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 ZZEF1O43149 2961 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 KALRNO60229 2985 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 OR7C2O60412 319 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 SCGB2A1O75556 95 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 FABP1P07148 127 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 PAX1P15863 534 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 MFAP2P55001 183 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 SELENOTP62341 195 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 CX3CL1P78423 397 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 SSBP2P81877 361 aaPredicted RBP5.4□□□□□ -1.54
MSH2-204ENST00000461394 KIAA0141Q14154 515 aaPredicted RBP5.4□□□□□ -1.54
MSH2-204ENST00000461394 LY6EQ16553 131 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 ECSCRQ19T08 205 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 DEFB113Q30KQ7 82 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 AWAT1Q58HT5 328 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 Q5PR19 223 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 C10orf113Q5VZT2 155 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 SPATA31B1PQ5VZV4 182 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 MIR17HGQ75NE6 70 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 TMEM219Q86XT9 240 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 Q8N1Y9 231 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 Q8N6K4 173 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 MAPK1IP1LQ8NDC0 245 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 OR5T1Q8NG75 326 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 OR1B1Q8NGR6 318 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 GATAD1Q8WUU5 269 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 RPUSD4Q96CM3 377 aaKnown RBP5.4□□□□□ -1.54
MSH2-204ENST00000461394 RBM14Q96PK6 669 aaKnown RBP5.4□□□□□ -1.54
MSH2-204ENST00000461394 PFDN5Q99471 154 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 FUT9Q9Y231 359 aa5.4□□□□□ -1.54
MSH2-204ENST00000461394 HRNRQ86YZ3 2850 aaPredicted RBP5.4□□□□□ -1.55
MSH2-204ENST00000461394 FAM74A7A6NL05 159 aa5.39□□□□□ -1.55
MSH2-204ENST00000461394 ZNF727A8MUV8 499 aa5.39□□□□□ -1.55
MSH2-204ENST00000461394 C11orf94C9JXX5 98 aa5.39□□□□□ -1.55
MSH2-204ENST00000461394 F6UZH7 168 aa5.39□□□□□ -1.55
MSH2-204ENST00000461394 F8W735 103 aaPredicted RBP5.39□□□□□ -1.55
MSH2-204ENST00000461394 H3BQ15 152 aa5.39□□□□□ -1.55
MSH2-204ENST00000461394 GNG7O60262 68 aa5.39□□□□□ -1.55
MSH2-204ENST00000461394 TGFAP01135 160 aa5.39□□□□□ -1.55
MSH2-204ENST00000461394 STAG3L2P0CL84 134 aa5.39□□□□□ -1.55
MSH2-204ENST00000461394 STAG3L3P0CL85 134 aa5.39□□□□□ -1.55
MSH2-204ENST00000461394 IGHV4-38-2P0DP08 117 aa5.39□□□□□ -1.55
MSH2-204ENST00000461394 ORM2P19652 201 aa5.39□□□□□ -1.55
MSH2-204ENST00000461394 GATA3P23771 443 aa5.39□□□□□ -1.55
MSH2-204ENST00000461394 GCHFRP30047 84 aa5.39□□□□□ -1.55
MSH2-204ENST00000461394 AKR1C3P42330 323 aa5.39□□□□□ -1.55
MSH2-204ENST00000461394 KRTAP10-9P60411 292 aa5.39□□□□□ -1.55
MSH2-204ENST00000461394 MEF2BQ02080 365 aaPredicted RBP5.39□□□□□ -1.55
MSH2-204ENST00000461394 ZNF90Q03938 601 aa5.39□□□□□ -1.55
MSH2-204ENST00000461394 EBI3Q14213 229 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms