RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 NPPCP23582 126 aa11.92□□□□□ -0.5
NCL-207ENST00000461347 CA7P43166 264 aa11.92□□□□□ -0.5
NCL-207ENST00000461347 ZCCHC24Q8N2G6 241 aaKnown RBP11.92□□□□□ -0.5
NCL-207ENST00000461347 IGHV1-18A0A0C4DH31 117 aa11.91□□□□□ -0.5
NCL-207ENST00000461347 C10orf55Q5SWW7 151 aa11.91□□□□□ -0.5
NCL-207ENST00000461347 TCF24Q7RTU0 167 aa11.91□□□□□ -0.5
NCL-207ENST00000461347 LHFPL4Q7Z7J7 247 aa11.91□□□□□ -0.5
NCL-207ENST00000461347 PRR7Q8TB68 274 aa11.91□□□□□ -0.5
NCL-207ENST00000461347 NBEAP1P0C6P0 100 aa11.91□□□□□ -0.5
NCL-207ENST00000461347 RIGQ13278 110 aa11.91□□□□□ -0.5
NCL-207ENST00000461347 KRTAP27-1Q3LI81 207 aa11.91□□□□□ -0.5
NCL-207ENST00000461347 LEMD1Q68G75 181 aa11.91□□□□□ -0.5
NCL-207ENST00000461347 Q6ZWC4 215 aa11.91□□□□□ -0.5
NCL-207ENST00000461347 TMEM70Q9BUB7 260 aa11.91□□□□□ -0.5
NCL-207ENST00000461347 ONECUT1Q9UBC0 465 aa11.91□□□□□ -0.5
NCL-207ENST00000461347 HIGD1AQ9Y241 93 aa11.91□□□□□ -0.5
NCL-207ENST00000461347 C9JCJ5 164 aa11.91□□□□□ -0.5
NCL-207ENST00000461347 SAPCD1Q5SSQ6 148 aa11.91□□□□□ -0.5
NCL-207ENST00000461347 COLQQ9Y215 455 aaPredicted RBP11.91□□□□□ -0.5
NCL-207ENST00000461347 A0A1W2PRE2 83 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 COA6Q5JTJ3 125 aaKnown RBP11.9□□□□□ -0.5
NCL-207ENST00000461347 SLC25A34Q6PIV7 304 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 GFRALQ6UXV0 394 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.9□□□□□ -0.5
NCL-207ENST00000461347 LINC00479Q96M42 142 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 HSPB8Q9UJY1 196 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 ARFGEF3Q5TH69 2177 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 IGKV1D-17A0A075B6S4 117 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 OR4C46A6NHA9 309 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 HBBP68871 147 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 RBPJQ06330 500 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 CD69Q07108 199 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 C1orf162Q8NEQ5 155 aaPredicted RBP11.9□□□□□ -0.5
NCL-207ENST00000461347 TEX50A0A1B0GTY4 177 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 GPX1P07203 203 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 FAM87AP0C7U9 286 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 AREGP15514 252 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 KIR2DL2P43627 348 aaPredicted RBP11.9□□□□□ -0.5
NCL-207ENST00000461347 PRRX1P54821 245 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 PRCDQ00LT1 54 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 FAM27E3Q08E93 113 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 GOLT1AQ6ZVE7 132 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 OSR1Q8TAX0 266 aaPredicted RBP11.9□□□□□ -0.5
NCL-207ENST00000461347 YPEL4Q96NS1 127 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 CDC42EP3Q9UKI2 254 aa11.9□□□□□ -0.5
NCL-207ENST00000461347 FAM90A9PA6NNJ1 464 aa11.89□□□□□ -0.51
NCL-207ENST00000461347 NCBP2LA6PVI3 153 aaKnown RBP11.89□□□□□ -0.51
NCL-207ENST00000461347 NUPR1O60356 82 aa11.89□□□□□ -0.51
NCL-207ENST00000461347 C3orf79P0CE67 100 aa11.89□□□□□ -0.51
NCL-207ENST00000461347 BPIFA4PQ86YQ2 179 aa11.89□□□□□ -0.51
NCL-207ENST00000461347 ZNF295-AS1Q8N0V1 137 aa11.89□□□□□ -0.51
NCL-207ENST00000461347 SRSF12Q8WXF0 261 aaKnown RBP11.89□□□□□ -0.51
NCL-207ENST00000461347 GRAMD2BQ96HH9 432 aa11.89□□□□□ -0.51
NCL-207ENST00000461347 PRRC2CQ9Y520 2896 aaKnown RBP11.89□□□□□ -0.51
NCL-207ENST00000461347 M0R296 226 aa11.89□□□□□ -0.51
NCL-207ENST00000461347 PRB4P10163 310 aaPredicted RBP11.89□□□□□ -0.51
NCL-207ENST00000461347 CLEC5AQ9NY25 188 aa11.89□□□□□ -0.51
NCL-207ENST00000461347 UQCRFS1P47985 274 aa11.89□□□□□ -0.51
NCL-207ENST00000461347 C5orf17Q8NAS9 161 aa11.89□□□□□ -0.51
NCL-207ENST00000461347 PMCHL2Q9BQD1 86 aa11.89□□□□□ -0.51
NCL-207ENST00000461347 NDFIP1Q9BT67 221 aa11.89□□□□□ -0.51
NCL-207ENST00000461347 C16orf97H3BN30 126 aa11.88□□□□□ -0.51
NCL-207ENST00000461347 NUDT3O95989 172 aa11.88□□□□□ -0.51
NCL-207ENST00000461347 LMO1P25800 156 aa11.88□□□□□ -0.51
NCL-207ENST00000461347 CX3CL1P78423 397 aa11.88□□□□□ -0.51
NCL-207ENST00000461347 MDS2Q8NDY4 140 aa11.88□□□□□ -0.51
NCL-207ENST00000461347 PPP1R14DQ9NXH3 145 aa11.88□□□□□ -0.51
NCL-207ENST00000461347 FBXL7Q9UJT9 491 aa11.88□□□□□ -0.51
NCL-207ENST00000461347 SNAI2O43623 268 aa11.88□□□□□ -0.51
NCL-207ENST00000461347 GNG7O60262 68 aa11.88□□□□□ -0.51
NCL-207ENST00000461347 CENPVQ7Z7K6 275 aaPredicted RBP11.88□□□□□ -0.51
NCL-207ENST00000461347 LPAR2Q9HBW0 351 aa11.88□□□□□ -0.51
NCL-207ENST00000461347 MALRD1Q5VYJ5 2156 aa11.88□□□□□ -0.51
NCL-207ENST00000461347 ATP5IP56385 69 aaPredicted RBP11.88□□□□□ -0.51
NCL-207ENST00000461347 PRB3Q04118 309 aaPredicted RBP11.88□□□□□ -0.51
NCL-207ENST00000461347 TIMM23BQ5SRD1 257 aa11.88□□□□□ -0.51
NCL-207ENST00000461347 Q6ZR03 302 aa11.88□□□□□ -0.51
NCL-207ENST00000461347 CACNG8Q8WXS5 425 aa11.88□□□□□ -0.51
NCL-207ENST00000461347 F2Z2F3 143 aa11.87□□□□□ -0.51
NCL-207ENST00000461347 OR10J3Q5JRS4 329 aa11.87□□□□□ -0.51
NCL-207ENST00000461347 ZNRD1Q9P1U0 126 aa11.87□□□□□ -0.51
NCL-207ENST00000461347 TRGV8A0A0C4DH27 118 aa11.87□□□□□ -0.51
NCL-207ENST00000461347 CORTO00230 105 aa11.87□□□□□ -0.51
NCL-207ENST00000461347 IGLV2-14P01704 120 aa11.87□□□□□ -0.51
NCL-207ENST00000461347 UNQ5815/PRO19632Q6UWF5 114 aa11.87□□□□□ -0.51
NCL-207ENST00000461347 ZNF71Q9NQZ8 489 aaPredicted RBP11.87□□□□□ -0.51
NCL-207ENST00000461347 FOXA2Q9Y261 457 aaPredicted RBP11.87□□□□□ -0.51
NCL-207ENST00000461347 TNRC18O15417 2968 aaPredicted RBP11.87□□□□□ -0.51
NCL-207ENST00000461347 MC5RP33032 325 aa11.87□□□□□ -0.51
NCL-207ENST00000461347 YPEL3P61236 119 aaPredicted RBP11.87□□□□□ -0.51
NCL-207ENST00000461347 ASPHD1Q5U4P2 390 aa11.87□□□□□ -0.51
NCL-207ENST00000461347 CHODLQ9H9P2 273 aa11.87□□□□□ -0.51
NCL-207ENST00000461347 ZGRF1Q86YA3 2104 aa11.87□□□□□ -0.51
NCL-207ENST00000461347 IGKV1-16P04430 117 aa11.86□□□□□ -0.51
NCL-207ENST00000461347 VDAC2P45880 294 aaPredicted RBP11.86□□□□□ -0.51
NCL-207ENST00000461347 FAM90A1Q86YD7 464 aa11.86□□□□□ -0.51
NCL-207ENST00000461347 RPL15P61313 204 aaKnown RBP11.86□□□□□ -0.51
NCL-207ENST00000461347 C1orf185Q5T7R7 199 aa11.86□□□□□ -0.51
NCL-207ENST00000461347 C12orf54Q6X4T0 127 aa11.86□□□□□ -0.51
NCL-207ENST00000461347 GPR82Q96P67 336 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms