RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 TOMM20LQ6UXN7 152 aa14.07□□□□□ -0.16
COL5A1-203ENST00000460264 GPR146Q96CH1 333 aa14.07□□□□□ -0.16
COL5A1-203ENST00000460264 FNDC4Q9H6D8 234 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-203ENST00000460264 MRPL36Q9P0J6 103 aaKnown RBP14.07□□□□□ -0.16
COL5A1-203ENST00000460264 TMEM56-RWDD3S4R434 201 aa14.07□□□□□ -0.16
COL5A1-203ENST00000460264 TRAV14DV4A0A0A6YYC5 116 aa14.06□□□□□ -0.16
COL5A1-203ENST00000460264 OPRK1P41145 380 aa14.06□□□□□ -0.16
COL5A1-203ENST00000460264 ZNF600Q6ZNG1 722 aa14.06□□□□□ -0.16
COL5A1-203ENST00000460264 TRIM63Q969Q1 353 aa14.06□□□□□ -0.16
COL5A1-203ENST00000460264 GALNT14Q96FL9 552 aa14.06□□□□□ -0.16
COL5A1-203ENST00000460264 GINS3Q9BRX5 216 aa14.06□□□□□ -0.16
COL5A1-203ENST00000460264 ZFAND3Q9H8U3 227 aa14.06□□□□□ -0.16
COL5A1-203ENST00000460264 DYNC2H1Q8NCM8 4307 aaKnown RBP14.06□□□□□ -0.16
COL5A1-203ENST00000460264 TMEM50AO95807 157 aa14.05□□□□□ -0.16
COL5A1-203ENST00000460264 TMEM187Q14656 261 aa14.05□□□□□ -0.16
COL5A1-203ENST00000460264 IL22RA2Q969J5 263 aa14.05□□□□□ -0.16
COL5A1-203ENST00000460264 SCGB3A2Q96PL1 93 aa14.05□□□□□ -0.16
COL5A1-203ENST00000460264 PRR13Q9NZ81 148 aa14.05□□□□□ -0.16
COL5A1-203ENST00000460264 PUS1Q9Y606 427 aaKnown RBP eCLIP14.05□□□□□ -0.16
COL5A1-203ENST00000460264 V9GYH0 126 aa14.05□□□□□ -0.16
COL5A1-203ENST00000460264 IGHV3OR16-13A0A075B7E8 117 aa14.04□□□□□ -0.16
COL5A1-203ENST00000460264 IGHV3-74A0A0B4J1X5 117 aa14.04□□□□□ -0.16
COL5A1-203ENST00000460264 CCDC160A6NGH7 325 aa14.04□□□□□ -0.16
COL5A1-203ENST00000460264 HTR2BP41595 481 aa14.04□□□□□ -0.16
COL5A1-203ENST00000460264 SUPT4H1P63272 117 aaKnown RBP14.04□□□□□ -0.16
COL5A1-203ENST00000460264 KLF9Q13886 244 aaPredicted RBP14.04□□□□□ -0.16
COL5A1-203ENST00000460264 FAM90A2PQ658T7 463 aa14.04□□□□□ -0.16
COL5A1-203ENST00000460264 OR4X1Q8NH49 305 aa14.04□□□□□ -0.16
COL5A1-203ENST00000460264 HEYLQ9NQ87 328 aaPredicted RBP14.04□□□□□ -0.16
COL5A1-203ENST00000460264 KCNIP3Q9Y2W7 256 aa14.04□□□□□ -0.16
COL5A1-203ENST00000460264 STARD9Q9P2P6 4700 aa14.04□□□□□ -0.16
COL5A1-203ENST00000460264 A0A1B0GU03 582 aa14.03□□□□□ -0.16
COL5A1-203ENST00000460264 CLN5O75503 358 aa14.03□□□□□ -0.16
COL5A1-203ENST00000460264 APOC4P55056 127 aa14.03□□□□□ -0.16
COL5A1-203ENST00000460264 MLANAQ16655 118 aa14.03□□□□□ -0.16
COL5A1-203ENST00000460264 PYDC2Q56P42 97 aa14.03□□□□□ -0.16
COL5A1-203ENST00000460264 ST8SIA2Q92186 375 aa14.03□□□□□ -0.16
COL5A1-203ENST00000460264 OVOL2Q9BRP0 275 aa14.03□□□□□ -0.16
COL5A1-203ENST00000460264 RBM38Q9H0Z9 239 aaKnown RBP14.03□□□□□ -0.16
COL5A1-203ENST00000460264 VSIRQ9H7M9 311 aa14.03□□□□□ -0.16
COL5A1-203ENST00000460264 CEBPZOSA8MTT3 80 aa14.02□□□□□ -0.17
COL5A1-203ENST00000460264 NXPH3O95157 252 aa14.02□□□□□ -0.17
COL5A1-203ENST00000460264 APOHP02749 345 aaPredicted RBP14.02□□□□□ -0.17
COL5A1-203ENST00000460264 SULT1A3P0DMM9 295 aa14.02□□□□□ -0.17
COL5A1-203ENST00000460264 SULT1A4P0DMN0 295 aa14.02□□□□□ -0.17
COL5A1-203ENST00000460264 AKR1C4P17516 323 aa14.02□□□□□ -0.17
COL5A1-203ENST00000460264 BMI1P35226 326 aa14.02□□□□□ -0.17
COL5A1-203ENST00000460264 FAUP35544 74 aaKnown RBP14.02□□□□□ -0.17
COL5A1-203ENST00000460264 ZNF79Q15937 498 aa14.02□□□□□ -0.17
COL5A1-203ENST00000460264 SLC24A4Q8NFF2 622 aa14.02□□□□□ -0.17
COL5A1-203ENST00000460264 IGKV3-7A0A075B6H7 116 aa14.01□□□□□ -0.17
COL5A1-203ENST00000460264 A0A0B4J2A0 478 aa14.01□□□□□ -0.17
COL5A1-203ENST00000460264 IGKV1-17P01599 117 aa14.01□□□□□ -0.17
COL5A1-203ENST00000460264 TFPI2P48307 235 aa14.01□□□□□ -0.17
COL5A1-203ENST00000460264 AP3S2P59780 193 aa14.01□□□□□ -0.17
COL5A1-203ENST00000460264 C2orf83Q53S99 150 aa14.01□□□□□ -0.17
COL5A1-203ENST00000460264 NMSQ5H8A3 153 aa14.01□□□□□ -0.17
COL5A1-203ENST00000460264 TCF24Q7RTU0 167 aa14.01□□□□□ -0.17
COL5A1-203ENST00000460264 GBGT1Q8N5D6 347 aa14.01□□□□□ -0.17
COL5A1-203ENST00000460264 TMEM170AQ8WVE7 144 aa14.01□□□□□ -0.17
COL5A1-203ENST00000460264 CACFD1Q9UGQ2 172 aa14.01□□□□□ -0.17
COL5A1-203ENST00000460264 SHPKQ9UHJ6 478 aa14.01□□□□□ -0.17
COL5A1-203ENST00000460264 LCE6AA0A183 80 aa14□□□□□ -0.17
COL5A1-203ENST00000460264 RPS10-NUDT3A0A1W2PQS6 291 aa14□□□□□ -0.17
COL5A1-203ENST00000460264 SCGB2A1O75556 95 aa14□□□□□ -0.17
COL5A1-203ENST00000460264 CD5P06127 495 aa14□□□□□ -0.17
COL5A1-203ENST00000460264 S100A5P33763 92 aa14□□□□□ -0.17
COL5A1-203ENST00000460264 SRPXP78539 464 aa14□□□□□ -0.17
COL5A1-203ENST00000460264 Q6ZWC4 215 aa14□□□□□ -0.17
COL5A1-203ENST00000460264 LYZL2Q7Z4W2 148 aa14□□□□□ -0.17
COL5A1-203ENST00000460264 APRG1Q8IVJ8 170 aa14□□□□□ -0.17
COL5A1-203ENST00000460264 LILRB2Q8N423 598 aa14□□□□□ -0.17
COL5A1-203ENST00000460264 TOMM5Q8N4H5 51 aa14□□□□□ -0.17
COL5A1-203ENST00000460264 IL17DQ8TAD2 202 aa14□□□□□ -0.17
COL5A1-203ENST00000460264 RNASEH2CQ8TDP1 164 aaKnown RBP14□□□□□ -0.17
COL5A1-203ENST00000460264 IGHV3-66A0A0C4DH42 116 aa13.99□□□□□ -0.17
COL5A1-203ENST00000460264 KIR2DL5BA0A0G2JN68 375 aa13.99□□□□□ -0.17
COL5A1-203ENST00000460264 KIR2DL5BA0A0G2JPC4 375 aa13.99□□□□□ -0.17
COL5A1-203ENST00000460264 RPL35AP18077 110 aaKnown RBP13.99□□□□□ -0.17
COL5A1-203ENST00000460264 NPY1RP25929 384 aa13.99□□□□□ -0.17
COL5A1-203ENST00000460264 TNFRSF9Q07011 255 aa13.99□□□□□ -0.17
COL5A1-203ENST00000460264 DEFB135Q30KP9 77 aa13.99□□□□□ -0.17
COL5A1-203ENST00000460264 TIGITQ495A1 244 aa13.99□□□□□ -0.17
COL5A1-203ENST00000460264 PRSS54Q6PEW0 395 aa13.99□□□□□ -0.17
COL5A1-203ENST00000460264 CCDC190Q86UF4 302 aa13.99□□□□□ -0.17
COL5A1-203ENST00000460264 KIR2DL5AQ8N109 375 aa13.99□□□□□ -0.17
COL5A1-203ENST00000460264 LGI3Q8N145 548 aa13.99□□□□□ -0.17
COL5A1-203ENST00000460264 KIR2DL5BQ8NHK3 375 aa13.99□□□□□ -0.17
COL5A1-203ENST00000460264 MAP6D1Q9H9H5 199 aa13.99□□□□□ -0.17
COL5A1-203ENST00000460264 HSPB7Q9UBY9 170 aa13.99□□□□□ -0.17
COL5A1-203ENST00000460264 TP53TG1Q9Y2A0 90 aa13.99□□□□□ -0.17
COL5A1-203ENST00000460264 TRAV30A0A087WSZ9 112 aa13.98□□□□□ -0.17
COL5A1-203ENST00000460264 ZNF701M0R085 212 aaPredicted RBP13.98□□□□□ -0.17
COL5A1-203ENST00000460264 UBE2CO00762 179 aa13.98□□□□□ -0.17
COL5A1-203ENST00000460264 DFFBO76075 338 aa13.98□□□□□ -0.17
COL5A1-203ENST00000460264 IGLC1P0CG04 106 aa13.98□□□□□ -0.17
COL5A1-203ENST00000460264 SLC25A4P12235 298 aa13.98□□□□□ -0.17
COL5A1-203ENST00000460264 ANXA3P12429 323 aa13.98□□□□□ -0.17
COL5A1-203ENST00000460264 NPPCP23582 126 aa13.98□□□□□ -0.17
COL5A1-203ENST00000460264 CCR6P51684 374 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms