RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 CD69Q07108 199 aa11.18□□□□□ -0.62
PTPRE-204ENST00000455661 VWA1Q6PCB0 445 aa11.18□□□□□ -0.62
PTPRE-204ENST00000455661 OR1L8Q8NGR8 309 aa11.18□□□□□ -0.62
PTPRE-204ENST00000455661 TRGV5A0A0B4J1U4 118 aa11.17□□□□□ -0.62
PTPRE-204ENST00000455661 A0A1B0GXF2 115 aa11.17□□□□□ -0.62
PTPRE-204ENST00000455661 hDV102S1A0JD36 115 aa11.17□□□□□ -0.62
PTPRE-204ENST00000455661 COX7A2P2O60397 106 aa11.17□□□□□ -0.62
PTPRE-204ENST00000455661 MLANAQ16655 118 aa11.17□□□□□ -0.62
PTPRE-204ENST00000455661 OR1L4Q8NGR5 311 aa11.17□□□□□ -0.62
PTPRE-204ENST00000455661 ZNF714Q96N38 554 aa11.17□□□□□ -0.62
PTPRE-204ENST00000455661 SIT1Q9Y3P8 196 aa11.17□□□□□ -0.62
PTPRE-204ENST00000455661 TEX50A0A1B0GTY4 177 aa11.17□□□□□ -0.62
PTPRE-204ENST00000455661 OR2T8A6NH00 312 aa11.17□□□□□ -0.62
PTPRE-204ENST00000455661 SRRM5B3KS81 715 aa11.17□□□□□ -0.62
PTPRE-204ENST00000455661 FAM120AOSQ5T036 256 aa11.17□□□□□ -0.62
PTPRE-204ENST00000455661 AMMECR1LQ6DCA0 310 aa11.17□□□□□ -0.62
PTPRE-204ENST00000455661 SSX8Q7RTT4 187 aa11.17□□□□□ -0.62
PTPRE-204ENST00000455661 GCSAMQ8N6F7 178 aa11.17□□□□□ -0.62
PTPRE-204ENST00000455661 ZNRF1Q8ND25 227 aa11.17□□□□□ -0.62
PTPRE-204ENST00000455661 OR2Z1Q8NG97 314 aa11.17□□□□□ -0.62
PTPRE-204ENST00000455661 CACNG8Q8WXS5 425 aa11.17□□□□□ -0.62
PTPRE-204ENST00000455661 URB1-AS1Q96HZ7 61 aa11.17□□□□□ -0.62
PTPRE-204ENST00000455661 IGHV1-24A0A0C4DH33 117 aa11.16□□□□□ -0.62
PTPRE-204ENST00000455661 MUC21A0A0G2JKD1 596 aa11.16□□□□□ -0.62
PTPRE-204ENST00000455661 MUC21A0A140T8X8 626 aa11.16□□□□□ -0.62
PTPRE-204ENST00000455661 SH2D7A6NKC9 451 aaPredicted RBP11.16□□□□□ -0.62
PTPRE-204ENST00000455661 PYYP10082 97 aa11.16□□□□□ -0.62
PTPRE-204ENST00000455661 RNASE2P10153 161 aaKnown RBP11.16□□□□□ -0.62
PTPRE-204ENST00000455661 MUC21Q5SSG8 566 aa11.16□□□□□ -0.62
PTPRE-204ENST00000455661 MORN5Q5VZ52 161 aa11.16□□□□□ -0.62
PTPRE-204ENST00000455661 C10orf113Q5VZT2 155 aa11.16□□□□□ -0.62
PTPRE-204ENST00000455661 MAP1LC3CQ9BXW4 147 aa11.16□□□□□ -0.62
PTPRE-204ENST00000455661 IGHV3OR15-7A0A075B7D8 119 aa11.15□□□□□ -0.62
PTPRE-204ENST00000455661 PATE3B3GLJ2 98 aa11.15□□□□□ -0.62
PTPRE-204ENST00000455661 CORTO00230 105 aa11.15□□□□□ -0.62
PTPRE-204ENST00000455661 CD5LO43866 347 aa11.15□□□□□ -0.62
PTPRE-204ENST00000455661 IGKV3-15P01624 115 aa11.15□□□□□ -0.62
PTPRE-204ENST00000455661 OR5AL1P0C617 328 aa11.15□□□□□ -0.62
PTPRE-204ENST00000455661 BPIFB3P59826 476 aa11.15□□□□□ -0.62
PTPRE-204ENST00000455661 Q6ZT83 130 aa11.15□□□□□ -0.62
PTPRE-204ENST00000455661 SPRR3Q9UBC9 169 aa11.15□□□□□ -0.62
PTPRE-204ENST00000455661 SOX21Q9Y651 276 aaPredicted RBP11.15□□□□□ -0.62
PTPRE-204ENST00000455661 PSMB11A5LHX3 300 aa11.15□□□□□ -0.62
PTPRE-204ENST00000455661 K7ERU9 68 aa11.15□□□□□ -0.62
PTPRE-204ENST00000455661 DLL1O00548 723 aa11.15□□□□□ -0.62
PTPRE-204ENST00000455661 LIPFP07098 398 aa11.15□□□□□ -0.62
PTPRE-204ENST00000455661 CD46P15529 392 aa11.15□□□□□ -0.62
PTPRE-204ENST00000455661 FOXA3P55318 350 aaPredicted RBP11.15□□□□□ -0.62
PTPRE-204ENST00000455661 C17orf58Q2M2W7 97 aa11.15□□□□□ -0.62
PTPRE-204ENST00000455661 PET117Q6UWS5 81 aa11.15□□□□□ -0.62
PTPRE-204ENST00000455661 SMIM12Q96EX1 92 aa11.15□□□□□ -0.62
PTPRE-204ENST00000455661 MS4A6AQ9H2W1 248 aa11.15□□□□□ -0.62
PTPRE-204ENST00000455661 TP73-AS1Q9UF72 201 aa11.15□□□□□ -0.62
PTPRE-204ENST00000455661 KBTBD11-OT1A0A1B0GTJ5 212 aa11.14□□□□□ -0.63
PTPRE-204ENST00000455661 A8MWL6 223 aa11.14□□□□□ -0.63
PTPRE-204ENST00000455661 HLA-DRB1P01911 266 aa11.14□□□□□ -0.63
PTPRE-204ENST00000455661 ERHP84090 104 aaKnown RBP11.14□□□□□ -0.63
PTPRE-204ENST00000455661 HIST1H1AQ02539 215 aaPredicted RBP11.14□□□□□ -0.63
PTPRE-204ENST00000455661 UTF1Q5T230 341 aa11.14□□□□□ -0.63
PTPRE-204ENST00000455661 MBNL2Q5VZF2 373 aaKnown RBP11.14□□□□□ -0.63
PTPRE-204ENST00000455661 TCF24Q7RTU0 167 aa11.14□□□□□ -0.63
PTPRE-204ENST00000455661 RPP21Q9H633 154 aaKnown RBP11.14□□□□□ -0.63
PTPRE-204ENST00000455661 SCRT2Q9NQ03 307 aa11.14□□□□□ -0.63
PTPRE-204ENST00000455661 PRUNE2Q8WUY3 3088 aa11.14□□□□□ -0.63
PTPRE-204ENST00000455661 NCOR1P1Q9H4R4 102 aa11.14□□□□□ -0.63
PTPRE-204ENST00000455661 C7orf69Q9H7B7 122 aa11.14□□□□□ -0.63
PTPRE-204ENST00000455661 PEF1Q9UBV8 284 aaKnown RBP11.14□□□□□ -0.63
PTPRE-204ENST00000455661 VWC2LB2RUY7 222 aa11.13□□□□□ -0.63
PTPRE-204ENST00000455661 CECR9P0C854 216 aa11.13□□□□□ -0.63
PTPRE-204ENST00000455661 CGB3P0DN86 165 aa11.13□□□□□ -0.63
PTPRE-204ENST00000455661 CGB7P0DN87 165 aa11.13□□□□□ -0.63
PTPRE-204ENST00000455661 LINC00173Q6ZV60 143 aa11.13□□□□□ -0.63
PTPRE-204ENST00000455661 PDPNQ86YL7 162 aa11.13□□□□□ -0.63
PTPRE-204ENST00000455661 MDS2Q8NDY4 140 aa11.13□□□□□ -0.63
PTPRE-204ENST00000455661 TMUB1Q9BVT8 246 aa11.13□□□□□ -0.63
PTPRE-204ENST00000455661 EPDR1Q9UM22 224 aa11.13□□□□□ -0.63
PTPRE-204ENST00000455661 GAGE12BA1L429 117 aa11.13□□□□□ -0.63
PTPRE-204ENST00000455661 SLC25A5P05141 298 aaKnown RBP11.13□□□□□ -0.63
PTPRE-204ENST00000455661 GNG5P63218 68 aa11.13□□□□□ -0.63
PTPRE-204ENST00000455661 PSG9Q00887 426 aa11.13□□□□□ -0.63
PTPRE-204ENST00000455661 GPR82Q96P67 336 aa11.13□□□□□ -0.63
PTPRE-204ENST00000455661 HSPB8Q9UJY1 196 aa11.13□□□□□ -0.63
PTPRE-204ENST00000455661 P01737 135 aa11.12□□□□□ -0.63
PTPRE-204ENST00000455661 CFHR2P36980 270 aa11.12□□□□□ -0.63
PTPRE-204ENST00000455661 CT83Q5H943 113 aa11.12□□□□□ -0.63
PTPRE-204ENST00000455661 FAM71F2Q6NXP2 309 aa11.12□□□□□ -0.63
PTPRE-204ENST00000455661 CNEP1R1Q8N9A8 125 aa11.12□□□□□ -0.63
PTPRE-204ENST00000455661 OR10W1Q8NGF6 305 aa11.12□□□□□ -0.63
PTPRE-204ENST00000455661 FXYD5Q96DB9 178 aa11.12□□□□□ -0.63
PTPRE-204ENST00000455661 CSTL1Q9H114 145 aa11.12□□□□□ -0.63
PTPRE-204ENST00000455661 ZNF430Q9H8G1 570 aaPredicted RBP11.12□□□□□ -0.63
PTPRE-204ENST00000455661 SRRM4A7MD48 611 aaKnown RBP11.12□□□□□ -0.63
PTPRE-204ENST00000455661 CHEK1O14757 476 aa11.12□□□□□ -0.63
PTPRE-204ENST00000455661 GPR183P32249 361 aa11.12□□□□□ -0.63
PTPRE-204ENST00000455661 ZNF841Q6ZN19 808 aa11.12□□□□□ -0.63
PTPRE-204ENST00000455661 RBMXL3Q8N7X1 1067 aaKnown RBP11.12□□□□□ -0.63
PTPRE-204ENST00000455661 STXBP6Q8NFX7 210 aa11.12□□□□□ -0.63
PTPRE-204ENST00000455661 DAZAP1Q96EP5 407 aaKnown RBP11.12□□□□□ -0.63
PTPRE-204ENST00000455661 PGLYRP4Q96LB8 373 aa11.12□□□□□ -0.63
PTPRE-204ENST00000455661 PMCHL2Q9BQD1 86 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 182.3 ms