RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 ECSCRQ19T08 205 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 CLEC12BQ2HXU8 276 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 DEFB113Q30KQ7 82 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 ZNF585BQ52M93 769 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 RPL39P5Q59GN2 51 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 PXDC1Q5TGL8 231 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 ADAMTSL5Q6ZMM2 481 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 LYZL2Q7Z4W2 148 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 TCTE3Q8IZS6 198 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 ABHD12Q8N2K0 398 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 OR52E5Q8NH55 327 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 OR51H1Q8NH63 302 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 OR9G1Q8NH87 305 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 COQ8AQ8NI60 647 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 LHFPL5Q8TAF8 219 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 PCNPQ8WW12 178 aaKnown RBP4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 C18orf12Q96KH6 178 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 TMEM56Q96MV1 263 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 RNF2Q99496 336 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 HSD17B10Q99714 261 aaKnown RBP4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 ZNF251Q9BRH9 671 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 HIPK2Q9H2X6 1198 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 MMP26Q9NRE1 261 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 ZNRD1Q9P1U0 126 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 TMEM56-RWDD3S4R434 201 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 CR1P17927 2039 aa4.1□□□□□ -1.75
HMGB1P4-201ENST00000455362 SVEP1Q4LDE5 3571 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 IGHV4OR15-8A0A075B7B6 117 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 A0A096LNT2 108 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 SAA2-SAA4A0A096LPE2 208 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 TRBV9A0A0B4J1U6 114 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 A0A1B0GUS0 222 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 ZNF98A6NK75 572 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 M0R1X1 148 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 TOR1AO14656 332 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 ENSAO43768 121 aaKnown RBP4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 IFNA21P01568 189 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 IGKV1-39P01597 117 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 IGLV1-47P01700 117 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 IGHG4P01861 327 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 IGKV1D-39P04432 117 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 GIPP09681 153 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 SAA2P0DJI9 122 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 CT45A6P0DMU7 189 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 CT45A5P0DMU8 189 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 CT45A7P0DMV0 189 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 GATA1P15976 413 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 SLC25A16P16260 332 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 USF1P22415 310 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 EIF2B2P49770 351 aaKnown RBP4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 GNG10P50151 68 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 DLX1P56177 255 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 SRPXP78539 464 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 PRB3Q04118 309 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 ARL16Q0P5N6 197 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 PSG3Q16557 428 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 Q5BKY6 102 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 SOHLH1Q5JUK2 328 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 HCP5Q6MZN7 132 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 PRSS57Q6UWY2 283 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 ZNF833PQ6ZTB9 187 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 SPAG16Q8N0X2 631 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 LGI3Q8N145 548 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 LYG1Q8N1E2 194 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 TCTEX1D1Q8N7M0 179 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 OR10X1Q8NGY0 326 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 GATAD1Q8WUU5 269 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 TCTEX1D2Q8WW35 142 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 ASB13Q8WXK3 278 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 IL22RA2Q969J5 263 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 SEC22AQ96IW7 307 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 CLEC7AQ9BXN2 247 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 CHIAQ9BZP6 476 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 OR51M1Q9H341 326 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 METTL8Q9H825 291 aaKnown RBP4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 HEXA-AS1Q9H8Q6 139 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 DMRT1Q9Y5R6 373 aa4.09□□□□□ -1.75
HMGB1P4-201ENST00000455362 TET2Q6N021 2002 aaPredicted RBP4.09□□□□□ -1.76
HMGB1P4-201ENST00000455362 IGHV2-26A0A0B4J1V2 119 aa4.08□□□□□ -1.76
HMGB1P4-201ENST00000455362 PIGBOS1A0A0B4J2F0 54 aa4.08□□□□□ -1.76
HMGB1P4-201ENST00000455362 DUXBA0A1W2PPF3 345 aa4.08□□□□□ -1.76
HMGB1P4-201ENST00000455362 MPTX1A8MV57 137 aa4.08□□□□□ -1.76
HMGB1P4-201ENST00000455362 LY6LH3BQJ8 138 aa4.08□□□□□ -1.76
HMGB1P4-201ENST00000455362 SMLR1H3BR10 107 aa4.08□□□□□ -1.76
HMGB1P4-201ENST00000455362 BUB1B-PAK6H3BSN5 160 aa4.08□□□□□ -1.76
HMGB1P4-201ENST00000455362 PPP1R2P9O14990 202 aa4.08□□□□□ -1.76
HMGB1P4-201ENST00000455362 RBFOX2O43251 390 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB1P4-201ENST00000455362 SNAPINO95295 136 aa4.08□□□□□ -1.76
HMGB1P4-201ENST00000455362 TSPAN13O95857 204 aa4.08□□□□□ -1.76
HMGB1P4-201ENST00000455362 IGKV1-5P01602 117 aa4.08□□□□□ -1.76
HMGB1P4-201ENST00000455362 C1QBP02746 253 aa4.08□□□□□ -1.76
HMGB1P4-201ENST00000455362 VDAC1P21796 283 aa4.08□□□□□ -1.76
HMGB1P4-201ENST00000455362 COX7A1P24310 79 aa4.08□□□□□ -1.76
HMGB1P4-201ENST00000455362 LPAR6P43657 344 aa4.08□□□□□ -1.76
HMGB1P4-201ENST00000455362 THBS3P49746 956 aa4.08□□□□□ -1.76
HMGB1P4-201ENST00000455362 ZNF137PP52743 207 aa4.08□□□□□ -1.76
HMGB1P4-201ENST00000455362 RPL8P62917 257 aaKnown RBP4.08□□□□□ -1.76
HMGB1P4-201ENST00000455362 CYCSP99999 105 aaKnown RBP4.08□□□□□ -1.76
HMGB1P4-201ENST00000455362 PAX8Q06710 450 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms