RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 KCTD14Q9BQ13 255 aaPredicted RBP3.22□□□□□ -1.89
SBDSP1-204ENST00000453858 TSSK6Q9BXA6 273 aa3.22□□□□□ -1.89
SBDSP1-204ENST00000453858 TRAV5A0A0B4J249 113 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 RBFOX3A6NFN3 312 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 L7N2F9 121 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 FXYD1O00168 92 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 CCSO14618 274 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 ATP8B1O43520 1251 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 SNNO75324 88 aaPredicted RBP3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 SCGB2A1O75556 95 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 SULT1C4O75897 302 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 DHFRP00374 187 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 APOA2P02652 100 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 TAGLN2P37802 199 aaKnown RBP3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 DEFB1P60022 68 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 CNBPP62633 177 aaKnown RBP3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 OPCMLQ14982 345 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 HMGN3Q15651 99 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 LBHQ53QV2 105 aaPredicted RBP3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 HSP90B2PQ58FF3 399 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 ERICH5Q6P6B1 374 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 REG3GQ6UW15 175 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 RASSF6Q6ZTQ3 369 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 NOTCH2NLQ7Z3S9 236 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 NRARPQ7Z6K4 114 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 OR52N1Q8NH53 320 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 MRPL30Q8TCC3 161 aaKnown RBP3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 GNPDA2Q8TDQ7 276 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 GALMQ96C23 342 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 HINT2Q9BX68 163 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 TTTY10Q9BZA0 68 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 SLC35B3Q9H1N7 401 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 GPR132Q9UNW8 380 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 BAIAP2Q9UQB8 552 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 LRRC42Q9Y546 428 aa3.21□□□□□ -1.9
SBDSP1-204ENST00000453858 TRBV5-5A0A0J9YX44 114 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 LOC107986453A0A1B0GWG9 222 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 HELTA6NFD8 242 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 RIIAD1A6NNX1 92 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 KRTAP4-16G5E9R7 235 aaPredicted RBP3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 CA11O75493 328 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 IFNGP01579 166 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 SAA1P0DJI8 122 aaPredicted RBP3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 ELK1P19419 428 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 GATA2P23769 480 aaPredicted RBP3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 NUDT2P50583 147 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 MRPS15P82914 257 aaKnown RBP3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 STX3Q13277 289 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 CDK10Q15131 360 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 MPV17LQ2QL34 196 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 VMA21Q3ZAQ7 101 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 ZFP69Q49AA0 526 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 AGKQ53H12 422 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 SAMD4BQ5PRF9 694 aaKnown RBP3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 SPINK6Q6UWN8 80 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 TOMM20LQ6UXN7 152 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 STX19Q8N4C7 294 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 C10orf126Q8N4M7 172 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 STXBP6Q8NFX7 210 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 OR2T33Q8NG76 320 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 OR56B1Q8NGI3 324 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 ISG20L2Q9H9L3 353 aaKnown RBP3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 IL36GQ9NZH8 169 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 IKZF2Q9UKS7 526 aa3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 ELF5Q9UKW6 265 aaPredicted RBP3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 RCL1Q9Y2P8 373 aaKnown RBP3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 MRPS7Q9Y2R9 242 aaKnown RBP3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 CHTOPQ9Y3Y2 248 aaKnown RBP3.2□□□□□ -1.9
SBDSP1-204ENST00000453858 IGLC7A0M8Q6 106 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 MCRIP1C9JLW8 97 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 K7EIM0 57 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 M0R1X1 148 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 GABRPO00591 440 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 CTDSPLO15194 276 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 CRXO43186 299 aaPredicted RBP3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 DCTN3O75935 186 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 YIF1AO95070 293 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 CDRT1O95170 752 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 DEFA4P12838 97 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 CIRBPQ14011 172 aaKnown RBP3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 ZNF79Q15937 498 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 ADAMTSL4-AS1Q5T5F5 129 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 EPGNQ6UW88 154 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 HOGA1Q86XE5 327 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 AQP12AQ8IXF9 295 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 MS4A15Q8N5U1 240 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 OR8J3Q8NGG0 315 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 OR13C9Q8NGT0 318 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 SLC25A46Q96AG3 418 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 C7orf50Q9BRJ6 194 aaKnown RBP3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 NXF2Q9GZY0 626 aaKnown RBP3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 C21orf62Q9NYP8 219 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 KCNIP1Q9NZI2 227 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 CLEC2DQ9UHP7 191 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 KIF25-AS1Q9Y6Z4 181 aa3.19□□□□□ -1.9
SBDSP1-204ENST00000453858 IGHV3-21A0A0B4J1V1 117 aa3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 CCDC182A6NF36 153 aa3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 A8MTW9 85 aa3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 C9JCJ5 164 aa3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 IFNGR2P38484 337 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms