RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058		A8MWP6	167 aa		13.65	□□□□□ -0.22
TOM1-210	ENST00000449058	ISLR	O14498	428 aa		13.65	□□□□□ -0.22
TOM1-210	ENST00000449058	ZNF124	Q15973	351 aa		13.65	□□□□□ -0.22
TOM1-210	ENST00000449058	VMA21	Q3ZAQ7	101 aa		13.65	□□□□□ -0.22
TOM1-210	ENST00000449058	NPIPB3	Q92617	1050 aa		13.65	□□□□□ -0.22
TOM1-210	ENST00000449058	NOL4L	Q96MY1	436 aa	Predicted RBP	13.65	□□□□□ -0.22
TOM1-210	ENST00000449058	TRBV9	A0A0B4J1U6	114 aa		13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	SLC25A17	O43808	307 aa		13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	UBE2L3	P68036	154 aa	Known RBP	13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	PRR30	Q53SZ7	412 aa	Predicted RBP	13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	PATE2	Q6UY27	113 aa		13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	OR8I2	Q8N0Y5	310 aa		13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	OR5AU1	Q8NGC0	362 aa		13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	RITA1	Q96K30	269 aa		13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	RNASE7	Q9H1E1	156 aa	Known RBP	13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	TPSG1	Q9NRR2	321 aa		13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	ARFGEF3	Q5TH69	2177 aa		13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	BSN	Q9UPA5	3926 aa		13.64	□□□□□ -0.23
TOM1-210	ENST00000449058		A0A1W2PPI3	338 aa		13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	GRIFIN	A4D1Z8	144 aa		13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	COX7A2P2	O60397	106 aa		13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	FRMD6-AS1	P0C7T7	363 aa		13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	ESD	P10768	282 aa		13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	LGALS7	P47929	136 aa		13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	RAB4B	P61018	213 aa		13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	IQCJ	Q1A5X6	159 aa		13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	OR1L4	Q8NGR5	311 aa		13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	MRPL36	Q9P0J6	103 aa	Known RBP	13.64	□□□□□ -0.23
TOM1-210	ENST00000449058	NAV3	Q8IVL0	2385 aa		13.63	□□□□□ -0.23
TOM1-210	ENST00000449058	ATM	Q13315	3056 aa		13.63	□□□□□ -0.23
TOM1-210	ENST00000449058	ACACA	Q13085	2346 aa		13.63	□□□□□ -0.23
TOM1-210	ENST00000449058	PCNX1	Q96RV3	2341 aa		13.63	□□□□□ -0.23
TOM1-210	ENST00000449058	IGHV1-69-2	A0A0G2JMI3	117 aa		13.63	□□□□□ -0.23
TOM1-210	ENST00000449058	FSTL3	O95633	263 aa		13.63	□□□□□ -0.23
TOM1-210	ENST00000449058	IER3	P46695	156 aa		13.63	□□□□□ -0.23
TOM1-210	ENST00000449058	LINC00310	P59036	64 aa		13.63	□□□□□ -0.23
TOM1-210	ENST00000449058	CX3CL1	P78423	397 aa		13.63	□□□□□ -0.23
TOM1-210	ENST00000449058	C10orf113	Q5VZT2	155 aa		13.63	□□□□□ -0.23
TOM1-210	ENST00000449058	PVRIG	Q6DKI7	326 aa		13.63	□□□□□ -0.23
TOM1-210	ENST00000449058	GNB1L	Q9BYB4	327 aa		13.63	□□□□□ -0.23
TOM1-210	ENST00000449058	TMEM133	Q9H2Q1	129 aa		13.63	□□□□□ -0.23
TOM1-210	ENST00000449058	ZNF355P	Q9NSJ1	428 aa		13.63	□□□□□ -0.23
TOM1-210	ENST00000449058	FCN1	O00602	326 aa		13.63	□□□□□ -0.23
TOM1-210	ENST00000449058	TBR1	Q16650	682 aa		13.63	□□□□□ -0.23
TOM1-210	ENST00000449058	CMTM2	Q8TAZ6	248 aa		13.63	□□□□□ -0.23
TOM1-210	ENST00000449058	CDC42EP3	Q9UKI2	254 aa		13.63	□□□□□ -0.23
TOM1-210	ENST00000449058	CRISP2	P16562	243 aa		13.62	□□□□□ -0.23
TOM1-210	ENST00000449058	TAS2R60	P59551	318 aa		13.62	□□□□□ -0.23
TOM1-210	ENST00000449058	ST6GALNAC3	Q8NDV1	305 aa		13.62	□□□□□ -0.23
TOM1-210	ENST00000449058	MAP1B	P46821	2468 aa	Known RBP	13.62	□□□□□ -0.23
TOM1-210	ENST00000449058	SMG1	Q96Q15	3661 aa	Known RBP	13.62	□□□□□ -0.23
TOM1-210	ENST00000449058	IGLC7	A0M8Q6	106 aa		13.61	□□□□□ -0.23
TOM1-210	ENST00000449058	PYY	P10082	97 aa		13.61	□□□□□ -0.23
TOM1-210	ENST00000449058	APOBEC3A	P31941	199 aa	Predicted RBP	13.61	□□□□□ -0.23
TOM1-210	ENST00000449058	BPIFB3	P59826	476 aa		13.61	□□□□□ -0.23
TOM1-210	ENST00000449058	SPACA3	Q8IXA5	215 aa		13.61	□□□□□ -0.23
TOM1-210	ENST00000449058	TEX45	Q8NA69	505 aa		13.61	□□□□□ -0.23
TOM1-210	ENST00000449058	PAXX	Q9BUH6	204 aa		13.61	□□□□□ -0.23
TOM1-210	ENST00000449058	SNURFL	B1AK76	121 aa		13.61	□□□□□ -0.23
TOM1-210	ENST00000449058	IGHV3-48	P01763	117 aa		13.61	□□□□□ -0.23
TOM1-210	ENST00000449058	CRYGC	P07315	174 aa		13.61	□□□□□ -0.23
TOM1-210	ENST00000449058	FXYD3	Q14802	87 aa		13.61	□□□□□ -0.23
TOM1-210	ENST00000449058	TNFRSF14	Q92956	283 aa		13.61	□□□□□ -0.23
TOM1-210	ENST00000449058	MS4A10	Q96PG2	267 aa		13.61	□□□□□ -0.23
TOM1-210	ENST00000449058	PKDREJ	Q9NTG1	2253 aa		13.61	□□□□□ -0.23
TOM1-210	ENST00000449058	SMIM27	A0A1W2PRY6	76 aa		13.6	□□□□□ -0.23
TOM1-210	ENST00000449058		Q0VG73	95 aa		13.6	□□□□□ -0.23
TOM1-210	ENST00000449058	MUC6	Q6W4X9	2439 aa		13.6	□□□□□ -0.23
TOM1-210	ENST00000449058	GVINP1	Q7Z2Y8	2422 aa		13.6	□□□□□ -0.23
TOM1-210	ENST00000449058		B9A039	149 aa		13.6	□□□□□ -0.23
TOM1-210	ENST00000449058	MT-ND6	P03923	174 aa		13.6	□□□□□ -0.23
TOM1-210	ENST00000449058	REG1A	P05451	166 aa		13.6	□□□□□ -0.23
TOM1-210	ENST00000449058	CRYGB	P07316	175 aa		13.6	□□□□□ -0.23
TOM1-210	ENST00000449058	PAFAH1B2	P68402	229 aa		13.6	□□□□□ -0.23
TOM1-210	ENST00000449058	RPL19	P84098	196 aa	Known RBP	13.6	□□□□□ -0.23
TOM1-210	ENST00000449058	IBA57	Q5T440	356 aa	Known RBP	13.6	□□□□□ -0.23
TOM1-210	ENST00000449058	WDR73	Q6P4I2	378 aa		13.6	□□□□□ -0.23
TOM1-210	ENST00000449058	ZNF329	Q86UD4	541 aa		13.6	□□□□□ -0.23
TOM1-210	ENST00000449058	FXYD5	Q96DB9	178 aa		13.6	□□□□□ -0.23
TOM1-210	ENST00000449058	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	13.6	□□□□□ -0.23
TOM1-210	ENST00000449058	IGHV3-72	A0A0B4J1Y9	119 aa		13.59	□□□□□ -0.23
TOM1-210	ENST00000449058	ENSA	O43768	121 aa	Known RBP	13.59	□□□□□ -0.23
TOM1-210	ENST00000449058	SERF1A	O75920	110 aa		13.59	□□□□□ -0.23
TOM1-210	ENST00000449058	IGLV1-47	P01700	117 aa		13.59	□□□□□ -0.23
TOM1-210	ENST00000449058	REL	Q04864	619 aa	Predicted RBP	13.59	□□□□□ -0.23
TOM1-210	ENST00000449058	COX19	Q49B96	90 aa		13.59	□□□□□ -0.23
TOM1-210	ENST00000449058	NDUFAF3	Q9BU61	184 aa		13.59	□□□□□ -0.23
TOM1-210	ENST00000449058	C22orf46	C9J442	243 aa		13.59	□□□□□ -0.23
TOM1-210	ENST00000449058	SCGB1D1	O95968	90 aa		13.59	□□□□□ -0.23
TOM1-210	ENST00000449058	MGST1	P10620	155 aa	Known RBP	13.59	□□□□□ -0.23
TOM1-210	ENST00000449058	MFAP2	P55001	183 aa		13.59	□□□□□ -0.23
TOM1-210	ENST00000449058	ETFRF1	Q6IPR1	90 aa		13.59	□□□□□ -0.23
TOM1-210	ENST00000449058	TMEM136	Q6ZRR5	245 aa		13.59	□□□□□ -0.23
TOM1-210	ENST00000449058	BEND2	Q8NDZ0	799 aa		13.59	□□□□□ -0.23
TOM1-210	ENST00000449058	LINC00479	Q96M42	142 aa		13.59	□□□□□ -0.23
TOM1-210	ENST00000449058	VKORC1	Q9BQB6	163 aa		13.59	□□□□□ -0.23
TOM1-210	ENST00000449058	NAGK	Q9UJ70	344 aa		13.59	□□□□□ -0.23
TOM1-210	ENST00000449058	RALY	Q9UKM9	306 aa	Known RBP	13.59	□□□□□ -0.23
TOM1-210	ENST00000449058	IGHV2-26	A0A0B4J1V2	119 aa		13.58	□□□□□ -0.24

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