RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 SPATA31B1PQ5VZV4 182 aa13.73□□□□□ -0.21
TCOF1-206ENST00000445265 ZNF726P1Q15940 193 aa13.73□□□□□ -0.21
TCOF1-206ENST00000445265 NEU1Q99519 415 aa13.73□□□□□ -0.21
TCOF1-206ENST00000445265 AP5S1Q9NUS5 200 aa13.73□□□□□ -0.21
TCOF1-206ENST00000445265 ANOS1P23352 680 aa13.73□□□□□ -0.21
TCOF1-206ENST00000445265 CRIM1Q9NZV1 1036 aa13.73□□□□□ -0.21
TCOF1-206ENST00000445265 LINC00205P59089 165 aa13.72□□□□□ -0.21
TCOF1-206ENST00000445265 FAM19A2Q8N3H0 131 aa13.72□□□□□ -0.21
TCOF1-206ENST00000445265 ZNF324O75467 553 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-206ENST00000445265 FAM169BQ8N8A8 192 aa13.72□□□□□ -0.21
TCOF1-206ENST00000445265 ATG101Q9BSB4 218 aa13.72□□□□□ -0.21
TCOF1-206ENST00000445265 PRDM13Q9H4Q3 707 aa13.72□□□□□ -0.21
TCOF1-206ENST00000445265 NCOA6Q14686 2063 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-206ENST00000445265 CACNA1GO43497 2377 aa13.72□□□□□ -0.21
TCOF1-206ENST00000445265 EPDR1Q9UM22 224 aa13.72□□□□□ -0.21
TCOF1-206ENST00000445265 ITGB1BP1O14713 200 aa13.71□□□□□ -0.21
TCOF1-206ENST00000445265 PYYP10082 97 aa13.71□□□□□ -0.21
TCOF1-206ENST00000445265 SAPCD1Q5SSQ6 148 aa13.71□□□□□ -0.21
TCOF1-206ENST00000445265 RBPMS2Q6ZRY4 209 aaKnown RBP13.71□□□□□ -0.21
TCOF1-206ENST00000445265 BEND2Q8NDZ0 799 aa13.71□□□□□ -0.21
TCOF1-206ENST00000445265 A0A1B0GUT8 65 aa13.71□□□□□ -0.21
TCOF1-206ENST00000445265 FNDC10F2Z333 226 aa13.71□□□□□ -0.21
TCOF1-206ENST00000445265 WDR86Q86TI4 376 aa13.71□□□□□ -0.21
TCOF1-206ENST00000445265 DPM3Q9P2X0 92 aa13.71□□□□□ -0.21
TCOF1-206ENST00000445265 MYOZ3Q8TDC0 251 aa13.71□□□□□ -0.21
TCOF1-206ENST00000445265 Q9H3A6 140 aa13.71□□□□□ -0.21
TCOF1-206ENST00000445265 RABAC1Q9UI14 185 aa13.71□□□□□ -0.21
TCOF1-206ENST00000445265 DOCK11Q5JSL3 2073 aa13.71□□□□□ -0.21
TCOF1-206ENST00000445265 TMEM78Q5T7P6 136 aa13.71□□□□□ -0.22
TCOF1-206ENST00000445265 DENND4AQ7Z401 1863 aa13.7□□□□□ -0.22
TCOF1-206ENST00000445265 RAB9AP51151 201 aa13.7□□□□□ -0.22
TCOF1-206ENST00000445265 KRTAP27-1Q3LI81 207 aa13.7□□□□□ -0.22
TCOF1-206ENST00000445265 TEX45Q8NA69 505 aa13.7□□□□□ -0.22
TCOF1-206ENST00000445265 OR10W1Q8NGF6 305 aa13.7□□□□□ -0.22
TCOF1-206ENST00000445265 CACNA1HO95180 2353 aa13.7□□□□□ -0.22
TCOF1-206ENST00000445265 SPANXN1Q5VSR9 72 aa13.7□□□□□ -0.22
TCOF1-206ENST00000445265 LURAP1LQ8IV03 231 aa13.7□□□□□ -0.22
TCOF1-206ENST00000445265 CLEC5AQ9NY25 188 aa13.7□□□□□ -0.22
TCOF1-206ENST00000445265 TMEM133Q9H2Q1 129 aa13.7□□□□□ -0.22
TCOF1-206ENST00000445265 LOC105371242A0A075B767 164 aa13.7□□□□□ -0.22
TCOF1-206ENST00000445265 C1orf194Q5T5A4 169 aa13.7□□□□□ -0.22
TCOF1-206ENST00000445265 TMEM256Q8N2U0 113 aa13.7□□□□□ -0.22
TCOF1-206ENST00000445265 MBD3L4A6NDZ8 208 aaPredicted RBP13.69□□□□□ -0.22
TCOF1-206ENST00000445265 MBD3L3A6NE82 208 aaPredicted RBP13.69□□□□□ -0.22
TCOF1-206ENST00000445265 MBD3L5A6NJ08 208 aaPredicted RBP13.69□□□□□ -0.22
TCOF1-206ENST00000445265 MBD3L2Q8NHZ7 208 aaPredicted RBP13.69□□□□□ -0.22
TCOF1-206ENST00000445265 ZNF318Q5VUA4 2279 aa13.69□□□□□ -0.22
TCOF1-206ENST00000445265 GZMBP10144 247 aa13.69□□□□□ -0.22
TCOF1-206ENST00000445265 Q6AWC8 147 aa13.69□□□□□ -0.22
TCOF1-206ENST00000445265 HAPLN4Q86UW8 402 aa13.69□□□□□ -0.22
TCOF1-206ENST00000445265 UBTD1Q9HAC8 227 aa13.69□□□□□ -0.22
TCOF1-206ENST00000445265 OTORQ9NRC9 128 aa13.69□□□□□ -0.22
TCOF1-206ENST00000445265 PLA2G2EQ9NZK7 142 aa13.69□□□□□ -0.22
TCOF1-206ENST00000445265 A0A1B0GW15 77 aa13.69□□□□□ -0.22
TCOF1-206ENST00000445265 UNQ5815/PRO19632Q6UWF5 114 aa13.69□□□□□ -0.22
TCOF1-206ENST00000445265 TCF24Q7RTU0 167 aa13.69□□□□□ -0.22
TCOF1-206ENST00000445265 PKDREJQ9NTG1 2253 aa13.69□□□□□ -0.22
TCOF1-206ENST00000445265 F5H697 171 aa13.69□□□□□ -0.22
TCOF1-206ENST00000445265 C14orf144Q96I85 54 aa13.69□□□□□ -0.22
TCOF1-206ENST00000445265 CYYR1Q96J86 154 aa13.69□□□□□ -0.22
TCOF1-206ENST00000445265 SPTBN1Q01082 2364 aaKnown RBP13.69□□□□□ -0.22
TCOF1-206ENST00000445265 OR4C46A6NHA9 309 aa13.68□□□□□ -0.22
TCOF1-206ENST00000445265 TNFSF13O75888 250 aa13.68□□□□□ -0.22
TCOF1-206ENST00000445265 NMUP48645 174 aa13.68□□□□□ -0.22
TCOF1-206ENST00000445265 GNG5P63218 68 aa13.68□□□□□ -0.22
TCOF1-206ENST00000445265 GUCD1Q96NT3 240 aa13.68□□□□□ -0.22
TCOF1-206ENST00000445265 MAP1LC3AQ9H492 121 aa13.68□□□□□ -0.22
TCOF1-206ENST00000445265 IGKV1D-33P01593 117 aa13.68□□□□□ -0.22
TCOF1-206ENST00000445265 IGKV1-33P01594 117 aa13.68□□□□□ -0.22
TCOF1-206ENST00000445265 PPP1R27Q86WC6 154 aa13.68□□□□□ -0.22
TCOF1-206ENST00000445265 ZCCHC24Q8N2G6 241 aaKnown RBP13.68□□□□□ -0.22
TCOF1-206ENST00000445265 TSKUQ8WUA8 353 aa13.68□□□□□ -0.22
TCOF1-206ENST00000445265 FOXH1O75593 365 aa13.67□□□□□ -0.22
TCOF1-206ENST00000445265 RELQ04864 619 aaPredicted RBP13.67□□□□□ -0.22
TCOF1-206ENST00000445265 PMCHL2Q9BQD1 86 aa13.67□□□□□ -0.22
TCOF1-206ENST00000445265 K7ERU9 68 aa13.67□□□□□ -0.22
TCOF1-206ENST00000445265 IGHV2-70P01814 119 aa13.67□□□□□ -0.22
TCOF1-206ENST00000445265 TMEM167AQ8TBQ9 72 aa13.67□□□□□ -0.22
TCOF1-206ENST00000445265 TNFRSF14Q92956 283 aa13.67□□□□□ -0.22
TCOF1-206ENST00000445265 ABHD17AQ96GS6 310 aa13.67□□□□□ -0.22
TCOF1-206ENST00000445265 METTL26Q96S19 204 aa13.67□□□□□ -0.22
TCOF1-206ENST00000445265 MUC22E2RYF6 1773 aaPredicted RBP13.67□□□□□ -0.22
TCOF1-206ENST00000445265 TMEM136Q6ZRR5 245 aa13.67□□□□□ -0.22
TCOF1-206ENST00000445265 CIARTQ8N365 385 aaPredicted RBP13.67□□□□□ -0.22
TCOF1-206ENST00000445265 CADP27708 2225 aa13.67□□□□□ -0.22
TCOF1-206ENST00000445265 TRAV5A0A0B4J249 113 aa13.66□□□□□ -0.22
TCOF1-206ENST00000445265 TYMSP04818 313 aa13.66□□□□□ -0.22
TCOF1-206ENST00000445265 ATP5L2Q7Z4Y8 100 aa13.66□□□□□ -0.22
TCOF1-206ENST00000445265 DOCK10Q96BY6 2186 aa13.66□□□□□ -0.22
TCOF1-206ENST00000445265 COTL1Q14019 142 aa13.66□□□□□ -0.22
TCOF1-206ENST00000445265 LAMTOR2Q9Y2Q5 125 aa13.66□□□□□ -0.22
TCOF1-206ENST00000445265 C19orf67A6NJJ6 358 aa13.66□□□□□ -0.22
TCOF1-206ENST00000445265 RASL11AQ6T310 242 aa13.66□□□□□ -0.22
TCOF1-206ENST00000445265 SLC25A48Q6ZT89 311 aaKnown RBP13.66□□□□□ -0.22
TCOF1-206ENST00000445265 ZNF664Q8N3J9 261 aa13.66□□□□□ -0.22
TCOF1-206ENST00000445265 LINC01560Q8TB33 94 aa13.66□□□□□ -0.22
TCOF1-206ENST00000445265 GAFA1Q96PS6 74 aa13.66□□□□□ -0.22
TCOF1-206ENST00000445265 WNT2P09544 360 aa13.65□□□□□ -0.22
TCOF1-206ENST00000445265 CX3CL1P78423 397 aa13.65□□□□□ -0.22
TCOF1-206ENST00000445265 KHDC1LQ5JSQ8 128 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms