RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 IGKV3-7A0A075B6H7 116 aa14.96□□□□□ -0.01
LRCH3-208ENST00000443727 IGHV3OR16-13A0A075B7E8 117 aa14.96□□□□□ -0.01
LRCH3-208ENST00000443727 IGHV3-74A0A0B4J1X5 117 aa14.96□□□□□ -0.01
LRCH3-208ENST00000443727 CEBPZOSA8MTT3 80 aa14.96□□□□□ -0.01
LRCH3-208ENST00000443727 AKR1C4P17516 323 aa14.96□□□□□ -0.01
LRCH3-208ENST00000443727 FAUP35544 74 aaKnown RBP14.96□□□□□ -0.01
LRCH3-208ENST00000443727 TOMM20LQ6UXN7 152 aa14.96□□□□□ -0.01
LRCH3-208ENST00000443727 ZNF600Q6ZNG1 722 aa14.96□□□□□ -0.01
LRCH3-208ENST00000443727 GPR146Q96CH1 333 aa14.96□□□□□ -0.01
LRCH3-208ENST00000443727 SOSTQ9BQB4 213 aa14.96□□□□□ -0.01
LRCH3-208ENST00000443727 TMEM56-RWDD3S4R434 201 aa14.96□□□□□ -0.01
LRCH3-208ENST00000443727 TMEM50AO95807 157 aa14.95□□□□□ -0.02
LRCH3-208ENST00000443727 S100A5P33763 92 aa14.95□□□□□ -0.02
LRCH3-208ENST00000443727 HTR2BP41595 481 aa14.95□□□□□ -0.02
LRCH3-208ENST00000443727 TFPI2P48307 235 aa14.95□□□□□ -0.02
LRCH3-208ENST00000443727 APOC4P55056 127 aa14.95□□□□□ -0.02
LRCH3-208ENST00000443727 AP3S2P59780 193 aa14.95□□□□□ -0.02
LRCH3-208ENST00000443727 PVRIGQ6DKI7 326 aa14.95□□□□□ -0.02
LRCH3-208ENST00000443727 IL17DQ8TAD2 202 aa14.95□□□□□ -0.02
LRCH3-208ENST00000443727 ZNF414Q96IQ9 312 aa14.95□□□□□ -0.02
LRCH3-208ENST00000443727 PUS1Q9Y606 427 aaKnown RBP eCLIP14.95□□□□□ -0.02
LRCH3-208ENST00000443727 RPS10-NUDT3A0A1W2PQS6 291 aa14.94□□□□□ -0.02
LRCH3-208ENST00000443727 SULT1A3P0DMM9 295 aa14.94□□□□□ -0.02
LRCH3-208ENST00000443727 SULT1A4P0DMN0 295 aa14.94□□□□□ -0.02
LRCH3-208ENST00000443727 ODF3L2Q3SX64 289 aa14.94□□□□□ -0.02
LRCH3-208ENST00000443727 AARDQ4LEZ3 155 aa14.94□□□□□ -0.02
LRCH3-208ENST00000443727 IL22RA2Q969J5 263 aa14.94□□□□□ -0.02
LRCH3-208ENST00000443727 PRR13Q9NZ81 148 aa14.94□□□□□ -0.02
LRCH3-208ENST00000443727 CACFD1Q9UGQ2 172 aa14.94□□□□□ -0.02
LRCH3-208ENST00000443727 CLN5O75503 358 aa14.93□□□□□ -0.02
LRCH3-208ENST00000443727 NXPH3O95157 252 aa14.93□□□□□ -0.02
LRCH3-208ENST00000443727 ANXA3P12429 323 aa14.93□□□□□ -0.02
LRCH3-208ENST00000443727 PAFAH1B2P68402 229 aa14.93□□□□□ -0.02
LRCH3-208ENST00000443727 TMEM187Q14656 261 aa14.93□□□□□ -0.02
LRCH3-208ENST00000443727 TOMM5Q8N4H5 51 aa14.93□□□□□ -0.02
LRCH3-208ENST00000443727 OR4X1Q8NH49 305 aa14.93□□□□□ -0.02
LRCH3-208ENST00000443727 TMEM230Q96A57 120 aa14.93□□□□□ -0.02
LRCH3-208ENST00000443727 GALNT14Q96FL9 552 aa14.93□□□□□ -0.02
LRCH3-208ENST00000443727 FNDC4Q9H6D8 234 aaPredicted RBP14.93□□□□□ -0.02
LRCH3-208ENST00000443727 CD5P06127 495 aa14.92□□□□□ -0.02
LRCH3-208ENST00000443727 CMC4P56277 68 aaPredicted RBP14.92□□□□□ -0.02
LRCH3-208ENST00000443727 RPL11P62913 178 aaKnown RBP14.92□□□□□ -0.02
LRCH3-208ENST00000443727 SRPXP78539 464 aa14.92□□□□□ -0.02
LRCH3-208ENST00000443727 MLANAQ16655 118 aa14.92□□□□□ -0.02
LRCH3-208ENST00000443727 BSXQ3C1V8 233 aa14.92□□□□□ -0.02
LRCH3-208ENST00000443727 TCF24Q7RTU0 167 aa14.92□□□□□ -0.02
LRCH3-208ENST00000443727 GBGT1Q8N5D6 347 aa14.92□□□□□ -0.02
LRCH3-208ENST00000443727 SLC24A4Q8NFF2 622 aa14.92□□□□□ -0.02
LRCH3-208ENST00000443727 TMEM231Q9H6L2 316 aa14.92□□□□□ -0.02
LRCH3-208ENST00000443727 IGHV3-66A0A0C4DH42 116 aa14.91□□□□□ -0.02
LRCH3-208ENST00000443727 RPL35AP18077 110 aaKnown RBP14.91□□□□□ -0.02
LRCH3-208ENST00000443727 KLF9Q13886 244 aaPredicted RBP14.91□□□□□ -0.02
LRCH3-208ENST00000443727 TMED4Q7Z7H5 227 aa14.91□□□□□ -0.02
LRCH3-208ENST00000443727 STPG3Q8N7X2 389 aa14.91□□□□□ -0.02
LRCH3-208ENST00000443727 ST8SIA2Q92186 375 aa14.91□□□□□ -0.02
LRCH3-208ENST00000443727 OVOL2Q9BRP0 275 aa14.91□□□□□ -0.02
LRCH3-208ENST00000443727 ZFAND3Q9H8U3 227 aa14.91□□□□□ -0.02
LRCH3-208ENST00000443727 MRPL36Q9P0J6 103 aaKnown RBP14.91□□□□□ -0.02
LRCH3-208ENST00000443727 TRAV30A0A087WSZ9 112 aa14.9□□□□□ -0.02
LRCH3-208ENST00000443727 A0A0B4J2A0 478 aa14.9□□□□□ -0.02
LRCH3-208ENST00000443727 A0A1B0GU03 582 aa14.9□□□□□ -0.02
LRCH3-208ENST00000443727 DNASE2O00115 360 aaPredicted RBP14.9□□□□□ -0.02
LRCH3-208ENST00000443727 NPPCP23582 126 aa14.9□□□□□ -0.02
LRCH3-208ENST00000443727 C2orf83Q53S99 150 aa14.9□□□□□ -0.02
LRCH3-208ENST00000443727 NOXA1Q86UR1 476 aa14.9□□□□□ -0.02
LRCH3-208ENST00000443727 WFDC3Q8IUB2 231 aa14.9□□□□□ -0.02
LRCH3-208ENST00000443727 APRG1Q8IVJ8 170 aa14.9□□□□□ -0.02
LRCH3-208ENST00000443727 LGI3Q8N145 548 aa14.9□□□□□ -0.02
LRCH3-208ENST00000443727 RNASEH2CQ8TDP1 164 aaKnown RBP14.9□□□□□ -0.02
LRCH3-208ENST00000443727 METTL26Q96S19 204 aa14.9□□□□□ -0.02
LRCH3-208ENST00000443727 SHPKQ9UHJ6 478 aa14.9□□□□□ -0.02
LRCH3-208ENST00000443727 V9GYH0 126 aa14.9□□□□□ -0.02
LRCH3-208ENST00000443727 RYR3Q15413 4870 aa14.89□□□□□ -0.03
LRCH3-208ENST00000443727 PIGBOS1A0A0B4J2F0 54 aa14.89□□□□□ -0.03
LRCH3-208ENST00000443727 A0A1W2PS18 150 aa14.89□□□□□ -0.03
LRCH3-208ENST00000443727 UBE2CO00762 179 aa14.89□□□□□ -0.03
LRCH3-208ENST00000443727 DFFBO76075 338 aa14.89□□□□□ -0.03
LRCH3-208ENST00000443727 APOHP02749 345 aaPredicted RBP14.89□□□□□ -0.03
LRCH3-208ENST00000443727 SLC25A4P12235 298 aa14.89□□□□□ -0.03
LRCH3-208ENST00000443727 CCR6P51684 374 aa14.89□□□□□ -0.03
LRCH3-208ENST00000443727 SUPT4H1P63272 117 aaKnown RBP14.89□□□□□ -0.03
LRCH3-208ENST00000443727 SMCO1Q147U7 214 aa14.89□□□□□ -0.03
LRCH3-208ENST00000443727 TIGITQ495A1 244 aa14.89□□□□□ -0.03
LRCH3-208ENST00000443727 LYZL2Q7Z4W2 148 aa14.89□□□□□ -0.03
LRCH3-208ENST00000443727 TRIM63Q969Q1 353 aa14.89□□□□□ -0.03
LRCH3-208ENST00000443727 NARS2Q96I59 477 aaKnown RBP14.89□□□□□ -0.03
LRCH3-208ENST00000443727 VSIRQ9H7M9 311 aa14.89□□□□□ -0.03
LRCH3-208ENST00000443727 KIR2DL5BA0A0G2JN68 375 aa14.88□□□□□ -0.03
LRCH3-208ENST00000443727 KIR2DL5BA0A0G2JPC4 375 aa14.88□□□□□ -0.03
LRCH3-208ENST00000443727 SPRY2O43597 315 aa14.88□□□□□ -0.03
LRCH3-208ENST00000443727 IFNA10P01566 189 aa14.88□□□□□ -0.03
LRCH3-208ENST00000443727 NPY1RP25929 384 aa14.88□□□□□ -0.03
LRCH3-208ENST00000443727 RND2P52198 227 aa14.88□□□□□ -0.03
LRCH3-208ENST00000443727 DEFB135Q30KP9 77 aa14.88□□□□□ -0.03
LRCH3-208ENST00000443727 NMSQ5H8A3 153 aa14.88□□□□□ -0.03
LRCH3-208ENST00000443727 FAM90A2PQ658T7 463 aa14.88□□□□□ -0.03
LRCH3-208ENST00000443727 ETFRF1Q6IPR1 90 aa14.88□□□□□ -0.03
LRCH3-208ENST00000443727 Q6ZWC4 215 aa14.88□□□□□ -0.03
LRCH3-208ENST00000443727 KIR2DL5AQ8N109 375 aa14.88□□□□□ -0.03
LRCH3-208ENST00000443727 OR1S1Q8NH92 325 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms