RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 MOSP00540 346 aa12.55□□□□□ -0.4
TSC2-206ENST00000439117 GPX1P07203 203 aa12.55□□□□□ -0.4
TSC2-206ENST00000439117 LINC01551Q86U37 167 aa12.55□□□□□ -0.4
TSC2-206ENST00000439117 FER1L6-AS1Q8NA97 138 aa12.55□□□□□ -0.4
TSC2-206ENST00000439117 TSKUQ8WUA8 353 aa12.55□□□□□ -0.4
TSC2-206ENST00000439117 SMPXQ9UHP9 88 aa12.55□□□□□ -0.4
TSC2-206ENST00000439117 WFDC3Q8IUB2 231 aa12.55□□□□□ -0.4
TSC2-206ENST00000439117 SNHG12Q9BXW3 62 aa12.55□□□□□ -0.4
TSC2-206ENST00000439117 MOB4Q9Y3A3 225 aa12.55□□□□□ -0.4
TSC2-206ENST00000439117 C3orf79P0CE67 100 aa12.55□□□□□ -0.4
TSC2-206ENST00000439117 PAX2Q02962 417 aa12.55□□□□□ -0.4
TSC2-206ENST00000439117 PAQR4Q8N4S7 273 aaPredicted RBP12.55□□□□□ -0.4
TSC2-206ENST00000439117 IFI27L1Q96BM0 104 aa12.55□□□□□ -0.4
TSC2-206ENST00000439117 IGKV1D-43A0A0B4J1Z2 117 aa12.54□□□□□ -0.4
TSC2-206ENST00000439117 TRAV8-4A0A0B4J246 113 aa12.54□□□□□ -0.4
TSC2-206ENST00000439117 KBTBD11-OT1A0A1B0GTJ5 212 aa12.54□□□□□ -0.4
TSC2-206ENST00000439117 CGB1A6NKQ9 187 aa12.54□□□□□ -0.4
TSC2-206ENST00000439117 PSG1P11464 419 aa12.54□□□□□ -0.4
TSC2-206ENST00000439117 OCIAD2Q56VL3 154 aa12.54□□□□□ -0.4
TSC2-206ENST00000439117 OR9G1Q8NH87 305 aa12.54□□□□□ -0.4
TSC2-206ENST00000439117 SNRNP200O75643 2136 aaKnown RBP12.54□□□□□ -0.4
TSC2-206ENST00000439117 LEPP41159 167 aa12.54□□□□□ -0.4
TSC2-206ENST00000439117 COQ2Q96H96 371 aa12.54□□□□□ -0.4
TSC2-206ENST00000439117 C9JCJ5 164 aa12.54□□□□□ -0.4
TSC2-206ENST00000439117 TGFAP01135 160 aa12.54□□□□□ -0.4
TSC2-206ENST00000439117 NRN1LQ496H8 165 aa12.54□□□□□ -0.4
TSC2-206ENST00000439117 TEX45Q8NA69 505 aa12.54□□□□□ -0.4
TSC2-206ENST00000439117 INTS1Q8N201 2190 aaKnown RBP12.54□□□□□ -0.4
TSC2-206ENST00000439117 NDUFA3O95167 84 aa12.54□□□□□ -0.4
TSC2-206ENST00000439117 GLRXP35754 106 aa12.54□□□□□ -0.4
TSC2-206ENST00000439117 GAGE1Q13065 139 aa12.54□□□□□ -0.4
TSC2-206ENST00000439117 MRPL27Q9P0M9 148 aaKnown RBP12.54□□□□□ -0.4
TSC2-206ENST00000439117 THADAQ6YHU6 1953 aa12.54□□□□□ -0.4
TSC2-206ENST00000439117 FOXI3A8MTJ6 420 aaPredicted RBP12.53□□□□□ -0.4
TSC2-206ENST00000439117 FAM57AQ8TBR7 257 aa12.53□□□□□ -0.4
TSC2-206ENST00000439117 ZSWIM8A7E2V4 1837 aa12.53□□□□□ -0.4
TSC2-206ENST00000439117 RNASE1P07998 156 aaKnown RBP12.53□□□□□ -0.4
TSC2-206ENST00000439117 SUPT4H1P63272 117 aaKnown RBP12.53□□□□□ -0.4
TSC2-206ENST00000439117 DOCK4Q8N1I0 1966 aa12.53□□□□□ -0.4
TSC2-206ENST00000439117 IGLV3-32A0A0A0MS00 114 aa12.53□□□□□ -0.4
TSC2-206ENST00000439117 FAM27E3Q08E93 113 aa12.53□□□□□ -0.4
TSC2-206ENST00000439117 TMEM249Q2WGJ8 235 aa12.53□□□□□ -0.4
TSC2-206ENST00000439117 C1orf162Q8NEQ5 155 aaPredicted RBP12.53□□□□□ -0.4
TSC2-206ENST00000439117 FNDC1Q4ZHG4 1894 aaPredicted RBP12.53□□□□□ -0.4
TSC2-206ENST00000439117 CST9LQ9H4G1 147 aa12.52□□□□□ -0.4
TSC2-206ENST00000439117 UBE2L6O14933 153 aa12.52□□□□□ -0.4
TSC2-206ENST00000439117 IGHV3-48P01763 117 aa12.52□□□□□ -0.4
TSC2-206ENST00000439117 NBASA2RRP1 2371 aa12.52□□□□□ -0.41
TSC2-206ENST00000439117 IGKCP01834 107 aa12.52□□□□□ -0.41
TSC2-206ENST00000439117 REG1AP05451 166 aa12.52□□□□□ -0.41
TSC2-206ENST00000439117 MESP1Q9BRJ9 268 aa12.52□□□□□ -0.41
TSC2-206ENST00000439117 OTORQ9NRC9 128 aa12.52□□□□□ -0.41
TSC2-206ENST00000439117 LY96Q9Y6Y9 160 aa12.52□□□□□ -0.41
TSC2-206ENST00000439117 B9A039 149 aa12.52□□□□□ -0.41
TSC2-206ENST00000439117 ZNF56Q15929 161 aa12.52□□□□□ -0.41
TSC2-206ENST00000439117 VKORC1Q9BQB6 163 aa12.52□□□□□ -0.41
TSC2-206ENST00000439117 Q9H3A6 140 aa12.52□□□□□ -0.41
TSC2-206ENST00000439117 EPDR1Q9UM22 224 aa12.52□□□□□ -0.41
TSC2-206ENST00000439117 IGKV1D-13A0A0B4J2D9 117 aa12.51□□□□□ -0.41
TSC2-206ENST00000439117 CECR9P0C854 216 aa12.51□□□□□ -0.41
TSC2-206ENST00000439117 IGKV1-13P0DP09 117 aa12.51□□□□□ -0.41
TSC2-206ENST00000439117 CCL1P22362 96 aa12.51□□□□□ -0.41
TSC2-206ENST00000439117 RPL39P5Q59GN2 51 aa12.51□□□□□ -0.41
TSC2-206ENST00000439117 LINC01560Q8TB33 94 aa12.51□□□□□ -0.41
TSC2-206ENST00000439117 H7C1H1 209 aa12.51□□□□□ -0.41
TSC2-206ENST00000439117 LYL1P12980 280 aa12.51□□□□□ -0.41
TSC2-206ENST00000439117 SUMO2P61956 95 aaKnown RBP12.51□□□□□ -0.41
TSC2-206ENST00000439117 BCL6BQ8N143 479 aaPredicted RBP12.51□□□□□ -0.41
TSC2-206ENST00000439117 VSIRQ9H7M9 311 aa12.51□□□□□ -0.41
TSC2-206ENST00000439117 LHX2P50458 406 aa12.51□□□□□ -0.41
TSC2-206ENST00000439117 SFTA2Q6UW10 78 aa12.51□□□□□ -0.41
TSC2-206ENST00000439117 MGAMO43451 1857 aa12.51□□□□□ -0.41
TSC2-206ENST00000439117 FAM159AQ6UWV7 190 aa12.51□□□□□ -0.41
TSC2-206ENST00000439117 SPAG8Q99932 426 aaPredicted RBP12.51□□□□□ -0.41
TSC2-206ENST00000439117 DEPPQ9NTK1 212 aa12.51□□□□□ -0.41
TSC2-206ENST00000439117 RALGAPA1Q6GYQ0 2036 aa12.51□□□□□ -0.41
TSC2-206ENST00000439117 PRR32B1ATL7 298 aa12.5□□□□□ -0.41
TSC2-206ENST00000439117 FAM106CPP0CH98 169 aa12.5□□□□□ -0.41
TSC2-206ENST00000439117 PI4KAP42356 2102 aa12.5□□□□□ -0.41
TSC2-206ENST00000439117 OR5AN1Q8NGI8 311 aa12.5□□□□□ -0.41
TSC2-206ENST00000439117 LEAP2Q969E1 77 aa12.5□□□□□ -0.41
TSC2-206ENST00000439117 EFNB3Q15768 340 aa12.5□□□□□ -0.41
TSC2-206ENST00000439117 OR13C6PQ8NH95 151 aa12.5□□□□□ -0.41
TSC2-206ENST00000439117 IGHV2-5P01817 119 aa12.5□□□□□ -0.41
TSC2-206ENST00000439117 NPPCP23582 126 aa12.5□□□□□ -0.41
TSC2-206ENST00000439117 TMEM190Q8WZ59 177 aa12.5□□□□□ -0.41
TSC2-206ENST00000439117 NPIPB11E5RHQ5 1161 aa12.5□□□□□ -0.41
TSC2-206ENST00000439117 FAM74A4Q5TZK3 123 aa12.5□□□□□ -0.41
TSC2-206ENST00000439117 PEAR1Q5VY43 1037 aaPredicted RBP12.5□□□□□ -0.41
TSC2-206ENST00000439117 DDB2Q92466 427 aa12.5□□□□□ -0.41
TSC2-206ENST00000439117 POLR3KQ9Y2Y1 108 aaPredicted RBP12.5□□□□□ -0.41
TSC2-206ENST00000439117 CD55P08174 381 aa12.49□□□□□ -0.41
TSC2-206ENST00000439117 ASIPP42127 132 aa12.49□□□□□ -0.41
TSC2-206ENST00000439117 RPP25LQ8N5L8 163 aaKnown RBP12.49□□□□□ -0.41
TSC2-206ENST00000439117 IGKV1-9A0A0C4DH69 117 aa12.49□□□□□ -0.41
TSC2-206ENST00000439117 H3BRM9 83 aa12.49□□□□□ -0.41
TSC2-206ENST00000439117 RNFT1Q5M7Z0 435 aa12.49□□□□□ -0.41
TSC2-206ENST00000439117 ZNF837Q96EG3 531 aaPredicted RBP12.49□□□□□ -0.41
TSC2-206ENST00000439117 CRIM1Q9NZV1 1036 aa12.49□□□□□ -0.41
TSC2-206ENST00000439117 M0R381 172 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms