RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 WNT9BO14905 357 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 ZNHIT1O43257 154 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 PAX4O43316 350 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 LYRM1O43325 122 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 TRAF3IP2O43734 574 aaPredicted RBP4.44□□□□□ -1.7
RFC3-202ENST00000434425 OR2T1O43869 369 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 RAMP1O60894 148 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 SLC2A10O95528 541 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 NTN1O95631 604 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 STATHP02808 62 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 GPX1P07203 203 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 HIST1H1DP16402 221 aaKnown RBP4.44□□□□□ -1.7
RFC3-202ENST00000434425 CXCL2P19875 107 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 CFPP27918 469 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 IGLV3-21P80748 117 aaPredicted RBP4.44□□□□□ -1.7
RFC3-202ENST00000434425 LOXL1Q08397 574 aaPredicted RBP4.44□□□□□ -1.7
RFC3-202ENST00000434425 TMEM267Q0VDI3 215 aaPredicted RBP4.44□□□□□ -1.7
RFC3-202ENST00000434425 DHRS2Q13268 280 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 FHL1Q13642 323 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 ZNF141Q15928 474 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 ZNF791Q3KP31 576 aaPredicted RBP4.44□□□□□ -1.7
RFC3-202ENST00000434425 FAM201AQ5SY85 155 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 IBA57Q5T440 356 aaKnown RBP4.44□□□□□ -1.7
RFC3-202ENST00000434425 MRPL2Q5T653 305 aaKnown RBP4.44□□□□□ -1.7
RFC3-202ENST00000434425 BCL2L15Q5TBC7 163 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 KCTD18Q6PI47 426 aaPredicted RBP4.44□□□□□ -1.7
RFC3-202ENST00000434425 RASL11AQ6T310 242 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 Q6ZVH6 145 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 HMGN2P46Q86SG4 172 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 NR2C2APQ86WQ0 139 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 TGIF2LYQ8IUE0 185 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 EXOC3-AS1Q8N2X6 119 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 METTL27Q8N6F8 245 aaPredicted RBP4.44□□□□□ -1.7
RFC3-202ENST00000434425 GVQW1Q8N7I0 195 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 OR51T1Q8NGJ9 327 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 Q8TCH9 128 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 RPS4Y2Q8TD47 263 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 EEF1AKMT3Q96AZ1 226 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 TMEM18Q96B42 140 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 SLAMF6Q96DU3 332 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 OR4C12Q96R67 309 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 NUFIP1Q9UHK0 495 aaKnown RBP4.44□□□□□ -1.7
RFC3-202ENST00000434425 CYSLTR1Q9Y271 337 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 MED31Q9Y3C7 131 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 IER3IP1Q9Y5U9 82 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 NSD1Q96L73 2696 aaPredicted RBP4.44□□□□□ -1.7
RFC3-202ENST00000434425 CHD3Q12873 2000 aaKnown RBP4.44□□□□□ -1.7
RFC3-202ENST00000434425 SCN3AQ9NY46 2000 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 COL6A5A8TX70 2615 aa4.44□□□□□ -1.7
RFC3-202ENST00000434425 TMED7-TICAM2A0A0A6YYA0 188 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 TRAV17A0A0B4J275 112 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 C5orf63A6NC05 138 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 RIIAD1A6NNX1 92 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 ZNF850A8MQ14 1090 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 H0YGG7 62 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 FOXS1O43638 330 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 GSTZ1O43708 216 aaPredicted RBP4.43□□□□□ -1.7
RFC3-202ENST00000434425 FGF17O60258 216 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 NPIPB7O75200 414 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 NDUFC2O95298 119 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 IGKV1D-16P01601 117 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 NMBP08949 121 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 LINC00694P0DN24 101 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 ELK1P19419 428 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 CAV3P56539 151 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 DEFA5Q01523 94 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 ZNF85Q03923 595 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 DEFB134Q4QY38 66 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 FAM120AOSQ5T036 256 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 Q6ZWC4 215 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 MOB1BQ7L9L4 216 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 PRIMA1Q86XR5 153 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 SLC35G3Q8N808 338 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 YIPF7Q8N8F6 280 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 ZFP41Q8N8Y5 198 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 NUP35Q8NFH5 326 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 OR52R1Q8NGF1 315 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 OR2T27Q8NH04 317 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 ADAT1Q9BUB4 502 aaKnown RBP4.43□□□□□ -1.7
RFC3-202ENST00000434425 DERL1Q9BUN8 251 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 OR10A2Q9H208 303 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 MOB1AQ9H8S9 216 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 ABRACLQ9P1F3 81 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 ZNF407Q9C0G0 2248 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 FBN1P35555 2871 aaKnown RBP4.43□□□□□ -1.7
RFC3-202ENST00000434425 LOC102724200A0A096LPH7 203 aaPredicted RBP4.43□□□□□ -1.7
RFC3-202ENST00000434425 A0A1B0GWA3 101 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 A0A1W2PRS3 328 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 RBFOX3A6NFN3 312 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 FAM183AA6NL82 134 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 UBL3O95164 117 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 PGA4P0DJD7 388 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 PGA3P0DJD8 388 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 COX6A1P12074 109 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 NTF3P20783 257 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 SUB1P53999 127 aaKnown RBP eCLIP4.43□□□□□ -1.75e-7■■■■■ 33
RFC3-202ENST00000434425 GRB2P62993 217 aaKnown RBP4.43□□□□□ -1.7
RFC3-202ENST00000434425 POU3F1Q03052 451 aaPredicted RBP4.43□□□□□ -1.7
RFC3-202ENST00000434425 COL10A1Q03692 680 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 KHDC3LQ587J8 217 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms