RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 THBDP07204 575 aa9.55□□□□□ -0.88
CD44-209ENST00000433892 PYYP10082 97 aa9.55□□□□□ -0.88
CD44-209ENST00000433892 USF1P22415 310 aaPredicted RBP9.55□□□□□ -0.88
CD44-209ENST00000433892 TPPP2P59282 170 aa9.55□□□□□ -0.88
CD44-209ENST00000433892 TAS2R60P59551 318 aa9.55□□□□□ -0.88
CD44-209ENST00000433892 CX3CL1P78423 397 aa9.55□□□□□ -0.88
CD44-209ENST00000433892 DMRTC2Q8IXT2 367 aaPredicted RBP9.55□□□□□ -0.88
CD44-209ENST00000433892 OR5AU1Q8NGC0 362 aa9.55□□□□□ -0.88
CD44-209ENST00000433892 NPIPB3Q92617 1050 aa9.55□□□□□ -0.88
CD44-209ENST00000433892 TBX15Q96SF7 602 aa9.55□□□□□ -0.88
CD44-209ENST00000433892 C2orf88Q9BSF0 95 aa9.55□□□□□ -0.88
CD44-209ENST00000433892 GNB1LQ9BYB4 327 aa9.55□□□□□ -0.88
CD44-209ENST00000433892 SERTAD4Q9NUC0 356 aa9.55□□□□□ -0.88
CD44-209ENST00000433892 NAT8BQ9UHF3 227 aa9.55□□□□□ -0.88
CD44-209ENST00000433892 COX7A2P2O60397 106 aa9.54□□□□□ -0.88
CD44-209ENST00000433892 CA1P00915 261 aaPredicted RBP9.54□□□□□ -0.88
CD44-209ENST00000433892 PPOXP50336 477 aa9.54□□□□□ -0.88
CD44-209ENST00000433892 PAFAH1B2P68402 229 aa9.54□□□□□ -0.88
CD44-209ENST00000433892 KIAA1644Q3SXP7 199 aa9.54□□□□□ -0.88
CD44-209ENST00000433892 IBA57Q5T440 356 aaKnown RBP9.54□□□□□ -0.88
CD44-209ENST00000433892 C1orf194Q5T5A4 169 aa9.54□□□□□ -0.88
CD44-209ENST00000433892 IGF2BP2-AS1Q96M15 143 aa9.54□□□□□ -0.88
CD44-209ENST00000433892 HSPB9Q9BQS6 159 aa9.54□□□□□ -0.88
CD44-209ENST00000433892 ZNF430Q9H8G1 570 aaPredicted RBP9.54□□□□□ -0.88
CD44-209ENST00000433892 OSTCQ9NRP0 149 aa9.54□□□□□ -0.88
CD44-209ENST00000433892 ISLRO14498 428 aa9.54□□□□□ -0.88
CD44-209ENST00000433892 PRRG2O14669 202 aa9.54□□□□□ -0.88
CD44-209ENST00000433892 EREGO14944 169 aa9.54□□□□□ -0.88
CD44-209ENST00000433892 NDUFB3O43676 98 aa9.54□□□□□ -0.88
CD44-209ENST00000433892 REG1AP05451 166 aa9.54□□□□□ -0.88
CD44-209ENST00000433892 TMEM167AQ8TBQ9 72 aa9.54□□□□□ -0.88
CD44-209ENST00000433892 RITA1Q96K30 269 aa9.54□□□□□ -0.88
CD44-209ENST00000433892 MRPL32Q9BYC8 188 aaKnown RBP9.54□□□□□ -0.88
CD44-209ENST00000433892 TPSG1Q9NRR2 321 aa9.54□□□□□ -0.88
CD44-209ENST00000433892 ZNF355PQ9NSJ1 428 aa9.54□□□□□ -0.88
CD44-209ENST00000433892 CBLN4Q9NTU7 201 aa9.54□□□□□ -0.88
CD44-209ENST00000433892 CEP295Q9C0D2 2601 aa9.54□□□□□ -0.88
CD44-209ENST00000433892 TRBV9A0A0B4J1U6 114 aa9.53□□□□□ -0.88
CD44-209ENST00000433892 A0A1W2PN81 502 aa9.53□□□□□ -0.88
CD44-209ENST00000433892 SLC25A17O43808 307 aa9.53□□□□□ -0.88
CD44-209ENST00000433892 ESDP10768 282 aa9.53□□□□□ -0.88
CD44-209ENST00000433892 RANP62826 216 aaKnown RBP9.53□□□□□ -0.88
CD44-209ENST00000433892 TDRG1Q3Y452 100 aa9.53□□□□□ -0.88
CD44-209ENST00000433892 LBHQ53QV2 105 aaPredicted RBP9.53□□□□□ -0.88
CD44-209ENST00000433892 LRRC10Q5BKY1 277 aa9.53□□□□□ -0.88
CD44-209ENST00000433892 MRPL54Q6P161 138 aaKnown RBP9.53□□□□□ -0.88
CD44-209ENST00000433892 TOMM20LQ6UXN7 152 aa9.53□□□□□ -0.88
CD44-209ENST00000433892 PDPNQ86YL7 162 aa9.53□□□□□ -0.88
CD44-209ENST00000433892 SAMD10Q9BYL1 202 aa9.53□□□□□ -0.88
CD44-209ENST00000433892 GNB4Q9HAV0 340 aa9.53□□□□□ -0.88
CD44-209ENST00000433892 MRPL36Q9P0J6 103 aaKnown RBP9.53□□□□□ -0.88
CD44-209ENST00000433892 CTSZQ9UBR2 303 aa9.53□□□□□ -0.88
CD44-209ENST00000433892 IGLV2-23P01705 113 aa9.53□□□□□ -0.88
CD44-209ENST00000433892 CDKN1AP38936 164 aa9.53□□□□□ -0.88
CD44-209ENST00000433892 Q0VG73 95 aa9.53□□□□□ -0.88
CD44-209ENST00000433892 C10orf113Q5VZT2 155 aa9.53□□□□□ -0.88
CD44-209ENST00000433892 PATE2Q6UY27 113 aa9.53□□□□□ -0.88
CD44-209ENST00000433892 TMEM136Q6ZRR5 245 aa9.53□□□□□ -0.88
CD44-209ENST00000433892 VSTM2AQ8TAG5 236 aa9.53□□□□□ -0.88
CD44-209ENST00000433892 TMEM186Q96B77 213 aa9.53□□□□□ -0.88
CD44-209ENST00000433892 DCHS2Q6V1P9 2916 aa9.53□□□□□ -0.88
CD44-209ENST00000433892 IGKV1D-37A0A075B6S9 117 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 IGHV3-72A0A0B4J1Y9 119 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 KIR2DL5BA0A0G2JN68 375 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 KIR2DL5BA0A0G2JPC4 375 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 INS-IGF2F8WCM5 200 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 PLAUP00749 431 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 SSTP61278 116 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 TPTE2P1Q5T6R2 138 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 KIR2DL5AQ8N109 375 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 FAM168AQ92567 244 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 ST6GALNAC6Q969X2 333 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 ABHD17AQ96GS6 310 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 PAXXQ9BUH6 204 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 SSBP3Q9BWW4 388 aaPredicted RBP9.52□□□□□ -0.89
CD44-209ENST00000433892 WASHC3Q9Y3C0 194 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 AMMECR1Q9Y4X0 333 aaPredicted RBP9.52□□□□□ -0.89
CD44-209ENST00000433892 APC2O95996 2303 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 TRAV34A0A0B4J273 112 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 SMIM27A0A1W2PRY6 76 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 TCRBV4S1A1TA0A5B7 111 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 ENSAO43768 121 aaKnown RBP9.52□□□□□ -0.89
CD44-209ENST00000433892 LOXP28300 417 aaPredicted RBP9.52□□□□□ -0.89
CD44-209ENST00000433892 SUB1P53999 127 aaKnown RBP eCLIP9.52□□□□□ -0.89
CD44-209ENST00000433892 RPL19P84098 196 aaKnown RBP9.52□□□□□ -0.89
CD44-209ENST00000433892 RUSC1-AS1Q66K80 236 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 WDR73Q6P4I2 378 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 TGIF2LXQ8IUE1 241 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 OR4A5Q8NH83 315 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 RNF2Q99496 336 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 FAM103A1Q9BTL3 118 aaKnown RBP9.52□□□□□ -0.89
CD44-209ENST00000433892 CDC42EP3Q9UKI2 254 aa9.52□□□□□ -0.89
CD44-209ENST00000433892 A0A1W2PPI3 338 aa9.51□□□□□ -0.89
CD44-209ENST00000433892 TNFRSF13BO14836 293 aaPredicted RBP9.51□□□□□ -0.89
CD44-209ENST00000433892 MT-ND6P03923 174 aa9.51□□□□□ -0.89
CD44-209ENST00000433892 APELAP0DMC3 54 aa9.51□□□□□ -0.89
CD44-209ENST00000433892 DLX1P56177 255 aa9.51□□□□□ -0.89
CD44-209ENST00000433892 PRB3Q04118 309 aaPredicted RBP9.51□□□□□ -0.89
CD44-209ENST00000433892 HCP5Q6MZN7 132 aa9.51□□□□□ -0.89
CD44-209ENST00000433892 LHFPL4Q7Z7J7 247 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms