RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 CDC34P49427 236 aaPredicted RBP12.02□□□□□ -0.48
ACTB-204ENST00000425660 BPIFB3P59826 476 aa12.02□□□□□ -0.48
ACTB-204ENST00000425660 ASPHD1Q5U4P2 390 aa12.02□□□□□ -0.48
ACTB-204ENST00000425660 ABHD5Q8WTS1 349 aa12.02□□□□□ -0.48
ACTB-204ENST00000425660 MISP3Q96FF7 219 aa12.02□□□□□ -0.48
ACTB-204ENST00000425660 ACY3Q96HD9 319 aa12.02□□□□□ -0.48
ACTB-204ENST00000425660 FAM103A1Q9BTL3 118 aaKnown RBP12.02□□□□□ -0.48
ACTB-204ENST00000425660 MRPL36Q9P0J6 103 aaKnown RBP12.02□□□□□ -0.48
ACTB-204ENST00000425660 ITPR2Q14571 2701 aa12.02□□□□□ -0.49
ACTB-204ENST00000425660 IGKV1D-37A0A075B6S9 117 aa12.02□□□□□ -0.49
ACTB-204ENST00000425660 IGHV4-31P0DP07 118 aa12.02□□□□□ -0.49
ACTB-204ENST00000425660 EGR2P11161 476 aaPredicted RBP12.02□□□□□ -0.49
ACTB-204ENST00000425660 DEFA4P12838 97 aa12.02□□□□□ -0.49
ACTB-204ENST00000425660 OR10J1P30954 320 aa12.02□□□□□ -0.49
ACTB-204ENST00000425660 FGF8P55075 233 aaPredicted RBP12.02□□□□□ -0.49
ACTB-204ENST00000425660 ZNF506Q5JVG8 444 aa12.02□□□□□ -0.49
ACTB-204ENST00000425660 FAM122CQ6P4D5 195 aa12.02□□□□□ -0.49
ACTB-204ENST00000425660 TTC9CQ8N5M4 171 aa12.02□□□□□ -0.49
ACTB-204ENST00000425660 NPIPB3Q92617 1050 aa12.02□□□□□ -0.49
ACTB-204ENST00000425660 RBM14Q96PK6 669 aaKnown RBP12.02□□□□□ -0.49
ACTB-204ENST00000425660 RARRES2Q99969 163 aa12.02□□□□□ -0.49
ACTB-204ENST00000425660 RASL11BQ9BPW5 248 aa12.02□□□□□ -0.49
ACTB-204ENST00000425660 SLC25A33Q9BSK2 321 aa12.02□□□□□ -0.49
ACTB-204ENST00000425660 ZANQ9Y493 2812 aa12.01□□□□□ -0.49
ACTB-204ENST00000425660 UNC79Q9P2D8 2635 aa12.01□□□□□ -0.49
ACTB-204ENST00000425660 I3L2K1 104 aa12.01□□□□□ -0.49
ACTB-204ENST00000425660 TGFAP01135 160 aa12.01□□□□□ -0.49
ACTB-204ENST00000425660 APOC3P02656 99 aa12.01□□□□□ -0.49
ACTB-204ENST00000425660 FBP1P09467 338 aa12.01□□□□□ -0.49
ACTB-204ENST00000425660 KHDC3LQ587J8 217 aa12.01□□□□□ -0.49
ACTB-204ENST00000425660 C5orf56Q8N8D9 126 aa12.01□□□□□ -0.49
ACTB-204ENST00000425660 MAPK1IP1LQ8NDC0 245 aa12.01□□□□□ -0.49
ACTB-204ENST00000425660 Q96MF0 132 aa12.01□□□□□ -0.49
ACTB-204ENST00000425660 A0A1W2PPV4 95 aa12□□□□□ -0.49
ACTB-204ENST00000425660 TCRBV4S1A1TA0A5B7 111 aa12□□□□□ -0.49
ACTB-204ENST00000425660 F8W036 122 aa12□□□□□ -0.49
ACTB-204ENST00000425660 MT-CO2P00403 227 aa12□□□□□ -0.49
ACTB-204ENST00000425660 HSPB1P04792 205 aaKnown RBP12□□□□□ -0.49
ACTB-204ENST00000425660 BCL2P10415 239 aa12□□□□□ -0.49
ACTB-204ENST00000425660 RND2P52198 227 aa12□□□□□ -0.49
ACTB-204ENST00000425660 ICAM4Q14773 271 aa12□□□□□ -0.49
ACTB-204ENST00000425660 CYP2G1PQ6ZSU1 146 aa12□□□□□ -0.49
ACTB-204ENST00000425660 C19orf24Q9BVV8 132 aa12□□□□□ -0.49
ACTB-204ENST00000425660 SLC35B3Q9H1N7 401 aa12□□□□□ -0.49
ACTB-204ENST00000425660 GNG13Q9P2W3 67 aa12□□□□□ -0.49
ACTB-204ENST00000425660 LOC102723971A0A1B0GUV8 181 aa12□□□□□ -0.49
ACTB-204ENST00000425660 PPT1P50897 306 aa12□□□□□ -0.49
ACTB-204ENST00000425660 SELENOTP62341 195 aa12□□□□□ -0.49
ACTB-204ENST00000425660 HAGHQ16775 308 aa12□□□□□ -0.49
ACTB-204ENST00000425660 SGMS2Q8NHU3 365 aa12□□□□□ -0.49
ACTB-204ENST00000425660 C22orf15Q8WYQ4 148 aa12□□□□□ -0.49
ACTB-204ENST00000425660 SSX3Q99909 188 aa12□□□□□ -0.49
ACTB-204ENST00000425660 HSPB9Q9BQS6 159 aa12□□□□□ -0.49
ACTB-204ENST00000425660 SEPSECSQ9HD40 501 aaKnown RBP12□□□□□ -0.49
ACTB-204ENST00000425660 BAHCC1Q9P281 2608 aa12□□□□□ -0.49
ACTB-204ENST00000425660 MOB4Q9Y3A3 225 aa12□□□□□ -0.49
ACTB-204ENST00000425660 CREBBPQ92793 2442 aa11.99□□□□□ -0.49
ACTB-204ENST00000425660 IGLV11-55A0A075B6I3 123 aa11.99□□□□□ -0.49
ACTB-204ENST00000425660 PSMB11A5LHX3 300 aa11.99□□□□□ -0.49
ACTB-204ENST00000425660 K7EIM0 57 aa11.99□□□□□ -0.49
ACTB-204ENST00000425660 HMGB3O15347 200 aaKnown RBP11.99□□□□□ -0.49
ACTB-204ENST00000425660 EIF3GO75821 320 aaKnown RBP eCLIP11.99□□□□□ -0.496e-9■■■□□ 16.1
ACTB-204ENST00000425660 IGHV3-48P01763 117 aa11.99□□□□□ -0.49
ACTB-204ENST00000425660 STAG3L2P0CL84 134 aa11.99□□□□□ -0.49
ACTB-204ENST00000425660 STAG3L3P0CL85 134 aa11.99□□□□□ -0.49
ACTB-204ENST00000425660 KLK9Q2XQG4 91 aa11.99□□□□□ -0.49
ACTB-204ENST00000425660 TRGV9Q99603 122 aa11.99□□□□□ -0.49
ACTB-204ENST00000425660 KLK9Q9UKQ9 250 aa11.99□□□□□ -0.49
ACTB-204ENST00000425660 ZFP92A6NM28 416 aa11.98□□□□□ -0.49
ACTB-204ENST00000425660 FSHBP01225 129 aa11.98□□□□□ -0.49
ACTB-204ENST00000425660 AMY1AP04745 511 aa11.98□□□□□ -0.49
ACTB-204ENST00000425660 RHOBP62745 196 aa11.98□□□□□ -0.49
ACTB-204ENST00000425660 RBMS3Q6XE24 437 aaKnown RBP11.98□□□□□ -0.49
ACTB-204ENST00000425660 SVBPQ8N300 66 aa11.98□□□□□ -0.49
ACTB-204ENST00000425660 OR4X1Q8NH49 305 aa11.98□□□□□ -0.49
ACTB-204ENST00000425660 FANCD2OSQ96PS1 177 aa11.98□□□□□ -0.49
ACTB-204ENST00000425660 SOX21Q9Y651 276 aaPredicted RBP11.98□□□□□ -0.49
ACTB-204ENST00000425660 FLNBO75369 2602 aaKnown RBP11.98□□□□□ -0.49
ACTB-204ENST00000425660 IFNA1P01562 189 aa11.97□□□□□ -0.49
ACTB-204ENST00000425660 GATA2P23769 480 aaPredicted RBP11.97□□□□□ -0.49
ACTB-204ENST00000425660 TAGLN2P37802 199 aaKnown RBP11.97□□□□□ -0.49
ACTB-204ENST00000425660 PSMB3P49720 205 aa11.97□□□□□ -0.49
ACTB-204ENST00000425660 ZNF90Q03938 601 aa11.97□□□□□ -0.49
ACTB-204ENST00000425660 SLC35E3Q7Z769 313 aa11.97□□□□□ -0.49
ACTB-204ENST00000425660 ZNF469Q96JG9 3925 aaPredicted RBP11.97□□□□□ -0.49
ACTB-204ENST00000425660 PDZD2O15018 2839 aa11.97□□□□□ -0.49
ACTB-204ENST00000425660 CR1P17927 2039 aa11.97□□□□□ -0.49
ACTB-204ENST00000425660 A6NDX4 124 aa11.97□□□□□ -0.49
ACTB-204ENST00000425660 NDUFS6O75380 124 aaKnown RBP11.97□□□□□ -0.49
ACTB-204ENST00000425660 SRP19P09132 144 aaKnown RBP11.97□□□□□ -0.49
ACTB-204ENST00000425660 OR5G3P0C626 314 aa11.97□□□□□ -0.49
ACTB-204ENST00000425660 GUCA2BQ16661 112 aa11.97□□□□□ -0.49
ACTB-204ENST00000425660 TMEM219Q86XT9 240 aa11.97□□□□□ -0.49
ACTB-204ENST00000425660 GATAD1Q8WUU5 269 aa11.97□□□□□ -0.49
ACTB-204ENST00000425660 TMEM37Q8WXS4 190 aa11.97□□□□□ -0.49
ACTB-204ENST00000425660 TMEM68Q96MH6 324 aa11.97□□□□□ -0.49
ACTB-204ENST00000425660 TMPRSS5Q9H3S3 457 aa11.97□□□□□ -0.49
ACTB-204ENST00000425660 MANBALQ9NQG1 85 aa11.97□□□□□ -0.49
ACTB-204ENST00000425660 TNFRSF19Q9NS68 423 aa11.97□□□□□ -0.49
ACTB-204ENST00000425660 VAX2Q9UIW0 290 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms