RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 SELENOHQ8IZQ5 122 aaKnown RBP9.51□□□□□ -0.89
SGCE-203ENST00000425444 DUSP18Q8NEJ0 188 aa9.51□□□□□ -0.89
SGCE-203ENST00000425444 LHFPL5Q8TAF8 219 aa9.51□□□□□ -0.89
SGCE-203ENST00000425444 GLYATL2Q8WU03 294 aa9.51□□□□□ -0.89
SGCE-203ENST00000425444 SPAG8Q99932 426 aaPredicted RBP9.51□□□□□ -0.89
SGCE-203ENST00000425444 RETNQ9HD89 108 aa9.51□□□□□ -0.89
SGCE-203ENST00000425444 CACNG5Q9UF02 275 aa9.51□□□□□ -0.89
SGCE-203ENST00000425444 KCNIP3Q9Y2W7 256 aa9.51□□□□□ -0.89
SGCE-203ENST00000425444 K7EMT4 169 aa9.5□□□□□ -0.89
SGCE-203ENST00000425444 SCGB2A1O75556 95 aa9.5□□□□□ -0.89
SGCE-203ENST00000425444 RNASE2P10153 161 aaKnown RBP9.5□□□□□ -0.89
SGCE-203ENST00000425444 ANXA3P12429 323 aa9.5□□□□□ -0.89
SGCE-203ENST00000425444 AKR1C4P17516 323 aa9.5□□□□□ -0.89
SGCE-203ENST00000425444 OPRK1P41145 380 aa9.5□□□□□ -0.89
SGCE-203ENST00000425444 SPCS3P61009 180 aa9.5□□□□□ -0.89
SGCE-203ENST00000425444 Q6ZRM9 215 aa9.5□□□□□ -0.89
SGCE-203ENST00000425444 TOMM5Q8N4H5 51 aa9.5□□□□□ -0.89
SGCE-203ENST00000425444 SOSTQ9BQB4 213 aa9.5□□□□□ -0.89
SGCE-203ENST00000425444 GINS3Q9BRX5 216 aa9.5□□□□□ -0.89
SGCE-203ENST00000425444 HEYLQ9NQ87 328 aaPredicted RBP9.5□□□□□ -0.89
SGCE-203ENST00000425444 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.5□□□□□ -0.89
SGCE-203ENST00000425444 PRR13Q9NZ81 148 aa9.5□□□□□ -0.89
SGCE-203ENST00000425444 IGHV3-49A0A0A0MS15 119 aa9.49□□□□□ -0.89
SGCE-203ENST00000425444 IGHV7-4-1A0A0J9YVY3 117 aa9.49□□□□□ -0.89
SGCE-203ENST00000425444 OR4C46A6NHA9 309 aa9.49□□□□□ -0.89
SGCE-203ENST00000425444 CEBPZOSA8MTT3 80 aa9.49□□□□□ -0.89
SGCE-203ENST00000425444 TSPAN4O14817 238 aa9.49□□□□□ -0.89
SGCE-203ENST00000425444 NXPH3O95157 252 aa9.49□□□□□ -0.89
SGCE-203ENST00000425444 LINC00322Q6ZN03 302 aaPredicted RBP9.49□□□□□ -0.89
SGCE-203ENST00000425444 OR52E5Q8NH55 327 aa9.49□□□□□ -0.89
SGCE-203ENST00000425444 TMEM230Q96A57 120 aa9.49□□□□□ -0.89
SGCE-203ENST00000425444 GPR146Q96CH1 333 aa9.49□□□□□ -0.89
SGCE-203ENST00000425444 GALNT14Q96FL9 552 aa9.49□□□□□ -0.89
SGCE-203ENST00000425444 FAM110AQ9BQ89 295 aa9.49□□□□□ -0.89
SGCE-203ENST00000425444 UBQLN2Q9UHD9 624 aa9.49□□□□□ -0.89
SGCE-203ENST00000425444 TMEM56-RWDD3S4R434 201 aa9.49□□□□□ -0.89
SGCE-203ENST00000425444 V9GYH0 126 aa9.49□□□□□ -0.89
SGCE-203ENST00000425444 LOC102724200A0A096LPH7 203 aaPredicted RBP9.48□□□□□ -0.89
SGCE-203ENST00000425444 TRAV14DV4A0A0A6YYC5 116 aa9.48□□□□□ -0.89
SGCE-203ENST00000425444 SULT1A3P0DMM9 295 aa9.48□□□□□ -0.89
SGCE-203ENST00000425444 SULT1A4P0DMN0 295 aa9.48□□□□□ -0.89
SGCE-203ENST00000425444 BMI1P35226 326 aa9.48□□□□□ -0.89
SGCE-203ENST00000425444 HTR2BP41595 481 aa9.48□□□□□ -0.89
SGCE-203ENST00000425444 KLF9Q13886 244 aaPredicted RBP9.48□□□□□ -0.89
SGCE-203ENST00000425444 TMEM187Q14656 261 aa9.48□□□□□ -0.89
SGCE-203ENST00000425444 ZNF600Q6ZNG1 722 aa9.48□□□□□ -0.89
SGCE-203ENST00000425444 TMED4Q7Z7H5 227 aa9.48□□□□□ -0.89
SGCE-203ENST00000425444 RPP25LQ8N5L8 163 aaKnown RBP9.48□□□□□ -0.89
SGCE-203ENST00000425444 TMEM116Q8NCL8 245 aa9.48□□□□□ -0.89
SGCE-203ENST00000425444 IL22RA2Q969J5 263 aa9.48□□□□□ -0.89
SGCE-203ENST00000425444 TRIM63Q969Q1 353 aa9.48□□□□□ -0.89
SGCE-203ENST00000425444 OR10C1Q96KK4 312 aa9.48□□□□□ -0.89
SGCE-203ENST00000425444 RNF2Q99496 336 aa9.48□□□□□ -0.89
SGCE-203ENST00000425444 RHPN1-AS1Q9BWJ2 59 aa9.48□□□□□ -0.89
SGCE-203ENST00000425444 GGTLC1Q9BX51 225 aa9.48□□□□□ -0.89
SGCE-203ENST00000425444 RBM38Q9H0Z9 239 aaKnown RBP9.48□□□□□ -0.89
SGCE-203ENST00000425444 HIPK2Q9H2X6 1198 aa9.48□□□□□ -0.89
SGCE-203ENST00000425444 SMPXQ9UHP9 88 aa9.48□□□□□ -0.89
SGCE-203ENST00000425444 FAT2Q9NYQ8 4349 aa9.48□□□□□ -0.89
SGCE-203ENST00000425444 IGKV3-7A0A075B6H7 116 aa9.47□□□□□ -0.89
SGCE-203ENST00000425444 IGHV3OR16-13A0A075B7E8 117 aa9.47□□□□□ -0.89
SGCE-203ENST00000425444 IGHV3-74A0A0B4J1X5 117 aa9.47□□□□□ -0.89
SGCE-203ENST00000425444 RPS10-NUDT3A0A1W2PQS6 291 aa9.47□□□□□ -0.89
SGCE-203ENST00000425444 CHEK1O14757 476 aa9.47□□□□□ -0.89
SGCE-203ENST00000425444 TFPI2P48307 235 aa9.47□□□□□ -0.89
SGCE-203ENST00000425444 SRPXP78539 464 aa9.47□□□□□ -0.89
SGCE-203ENST00000425444 AARDQ4LEZ3 155 aa9.47□□□□□ -0.89
SGCE-203ENST00000425444 SPANXN2Q5MJ10 180 aa9.47□□□□□ -0.89
SGCE-203ENST00000425444 PVRIGQ6DKI7 326 aa9.47□□□□□ -0.89
SGCE-203ENST00000425444 TOMM20LQ6UXN7 152 aa9.47□□□□□ -0.89
SGCE-203ENST00000425444 LGI3Q8N145 548 aa9.47□□□□□ -0.89
SGCE-203ENST00000425444 SLC24A4Q8NFF2 622 aa9.47□□□□□ -0.89
SGCE-203ENST00000425444 CACFD1Q9UGQ2 172 aa9.47□□□□□ -0.89
SGCE-203ENST00000425444 PUS1Q9Y606 427 aaKnown RBP eCLIP9.47□□□□□ -0.89
SGCE-203ENST00000425444 DNAH6Q9C0G6 4158 aa9.47□□□□□ -0.89
SGCE-203ENST00000425444 A0A0B4J2A0 478 aa9.46□□□□□ -0.9
SGCE-203ENST00000425444 ZNF701M0R085 212 aaPredicted RBP9.46□□□□□ -0.9
SGCE-203ENST00000425444 CLN5O75503 358 aa9.46□□□□□ -0.9
SGCE-203ENST00000425444 TMEM50AO95807 157 aa9.46□□□□□ -0.9
SGCE-203ENST00000425444 INPP1P49441 399 aa9.46□□□□□ -0.9
SGCE-203ENST00000425444 SUPT4H1P63272 117 aaKnown RBP9.46□□□□□ -0.9
SGCE-203ENST00000425444 ZNF79Q15937 498 aa9.46□□□□□ -0.9
SGCE-203ENST00000425444 BSXQ3C1V8 233 aa9.46□□□□□ -0.9
SGCE-203ENST00000425444 ZNF414Q96IQ9 312 aa9.46□□□□□ -0.9
SGCE-203ENST00000425444 FNDC4Q9H6D8 234 aaPredicted RBP9.46□□□□□ -0.9
SGCE-203ENST00000425444 SHPKQ9UHJ6 478 aa9.46□□□□□ -0.9
SGCE-203ENST00000425444 DNAH2Q9P225 4427 aa9.46□□□□□ -0.9
SGCE-203ENST00000425444 DYNC1H1Q14204 4646 aaKnown RBP9.45□□□□□ -0.9
SGCE-203ENST00000425444 PIGBOS1A0A0B4J2F0 54 aa9.45□□□□□ -0.9
SGCE-203ENST00000425444 VAMP1P23763 118 aa9.45□□□□□ -0.9
SGCE-203ENST00000425444 NPY1RP25929 384 aa9.45□□□□□ -0.9
SGCE-203ENST00000425444 CCR6P51684 374 aa9.45□□□□□ -0.9
SGCE-203ENST00000425444 PAFAH1B2P68402 229 aa9.45□□□□□ -0.9
SGCE-203ENST00000425444 SMCO1Q147U7 214 aa9.45□□□□□ -0.9
SGCE-203ENST00000425444 ODF3L2Q3SX64 289 aa9.45□□□□□ -0.9
SGCE-203ENST00000425444 C2orf83Q53S99 150 aa9.45□□□□□ -0.9
SGCE-203ENST00000425444 TRIQKQ629K1 86 aa9.45□□□□□ -0.9
SGCE-203ENST00000425444 LYZL2Q7Z4W2 148 aa9.45□□□□□ -0.9
SGCE-203ENST00000425444 CCDC190Q86UF4 302 aa9.45□□□□□ -0.9
SGCE-203ENST00000425444 NOXA1Q86UR1 476 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms