RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 ARF6P62330 175 aa9.32□□□□□ -0.92
UBR4-207ENST00000425413 SUMO1P63165 101 aaKnown RBP9.32□□□□□ -0.92
UBR4-207ENST00000425413 HLA-DRB5Q30154 266 aa9.32□□□□□ -0.92
UBR4-207ENST00000425413 OR1P1Q8NH06 330 aa9.32□□□□□ -0.92
UBR4-207ENST00000425413 ZNF503Q96F45 646 aa9.32□□□□□ -0.92
UBR4-207ENST00000425413 PRDM13Q9H4Q3 707 aa9.32□□□□□ -0.92
UBR4-207ENST00000425413 GSX1Q9H4S2 264 aaPredicted RBP9.32□□□□□ -0.92
UBR4-207ENST00000425413 MDFIC2A0A1B0GVS7 189 aa9.31□□□□□ -0.92
UBR4-207ENST00000425413 MT-CO2P00403 227 aa9.31□□□□□ -0.92
UBR4-207ENST00000425413 PYYP10082 97 aa9.31□□□□□ -0.92
UBR4-207ENST00000425413 TMEM183AQ8IXX5 376 aa9.31□□□□□ -0.92
UBR4-207ENST00000425413 SGMS2Q8NHU3 365 aa9.31□□□□□ -0.92
UBR4-207ENST00000425413 VSTM2AQ8TAG5 236 aa9.31□□□□□ -0.92
UBR4-207ENST00000425413 HILPDAQ9Y5L2 63 aa9.31□□□□□ -0.92
UBR4-207ENST00000425413 VENTXO95231 258 aa9.31□□□□□ -0.92
UBR4-207ENST00000425413 OR5G3P0C626 314 aa9.31□□□□□ -0.92
UBR4-207ENST00000425413 ZNF841Q6ZN19 808 aa9.31□□□□□ -0.92
UBR4-207ENST00000425413 SSX8Q7RTT4 187 aa9.31□□□□□ -0.92
UBR4-207ENST00000425413 ANAPC16Q96DE5 110 aa9.31□□□□□ -0.92
UBR4-207ENST00000425413 SFRP2Q96HF1 295 aa9.31□□□□□ -0.92
UBR4-207ENST00000425413 FBXL15Q9H469 300 aa9.31□□□□□ -0.92
UBR4-207ENST00000425413 AMBPP02760 352 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 ORM2P19652 201 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 PLGLAQ15195 96 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 KCNIP4Q6PIL6 250 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 NHLRC2Q8NBF2 726 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 RPEQ96AT9 228 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 TECRQ9NZ01 308 aaKnown RBP9.3□□□□□ -0.92
UBR4-207ENST00000425413 SPG11Q96JI7 2443 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 C22orf46C9J442 243 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 K7EN84 100 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 SPINK4O60575 86 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 NDUFS6O75380 124 aaKnown RBP9.3□□□□□ -0.92
UBR4-207ENST00000425413 IL3RAP26951 378 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 KLRD1Q13241 179 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 LINC00311Q8N616 119 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 IGHV1-3A0A0C4DH29 117 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 A0A1W2PN81 502 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 FCN1O00602 326 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 COX7A2P2O60397 106 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 PRB4P10163 310 aaPredicted RBP9.3□□□□□ -0.92
UBR4-207ENST00000425413 UBE2L3P68036 154 aaKnown RBP9.3□□□□□ -0.92
UBR4-207ENST00000425413 TMEM249Q2WGJ8 235 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 UNQ6494/PRO21346Q6UXR6 183 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 OR5AU1Q8NGC0 362 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 LINC00479Q96M42 142 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 CLEC7AQ9BXN2 247 aa9.3□□□□□ -0.92
UBR4-207ENST00000425413 A0A1B0GUS0 222 aa9.29□□□□□ -0.92
UBR4-207ENST00000425413 GGTLC3B5MD39 225 aa9.29□□□□□ -0.92
UBR4-207ENST00000425413 H3BTX0 84 aa9.29□□□□□ -0.92
UBR4-207ENST00000425413 NDUFS7O75251 213 aa9.29□□□□□ -0.92
UBR4-207ENST00000425413 MC5RP33032 325 aa9.29□□□□□ -0.92
UBR4-207ENST00000425413 MRGPRG-AS1Q2M3A8 158 aa9.29□□□□□ -0.92
UBR4-207ENST00000425413 PQLC2Q6ZP29 291 aa9.29□□□□□ -0.92
UBR4-207ENST00000425413 PYGO2Q9BRQ0 406 aa9.29□□□□□ -0.92
UBR4-207ENST00000425413 SLC25A33Q9BSK2 321 aa9.29□□□□□ -0.92
UBR4-207ENST00000425413 ZMAT5Q9UDW3 170 aaKnown RBP9.29□□□□□ -0.92
UBR4-207ENST00000425413 PKD1L2Q7Z442 2459 aa9.29□□□□□ -0.92
UBR4-207ENST00000425413 BUB1B-PAK6H3BSN5 160 aa9.29□□□□□ -0.92
UBR4-207ENST00000425413 RPL27AP46776 148 aaKnown RBP9.29□□□□□ -0.92
UBR4-207ENST00000425413 PRRX1P54821 245 aa9.29□□□□□ -0.92
UBR4-207ENST00000425413 MFAP2P55001 183 aa9.29□□□□□ -0.92
UBR4-207ENST00000425413 UCNP55089 124 aa9.29□□□□□ -0.92
UBR4-207ENST00000425413 FXYD3Q14802 87 aa9.29□□□□□ -0.92
UBR4-207ENST00000425413 LDLRAD2Q5SZI1 272 aa9.29□□□□□ -0.92
UBR4-207ENST00000425413 ST6GALNAC3Q8NDV1 305 aa9.29□□□□□ -0.92
UBR4-207ENST00000425413 ZNF355PQ9NSJ1 428 aa9.29□□□□□ -0.92
UBR4-207ENST00000425413 IGLV1-47P01700 117 aa9.28□□□□□ -0.92
UBR4-207ENST00000425413 GPX4P36969 197 aaPredicted RBP9.28□□□□□ -0.92
UBR4-207ENST00000425413 SUB1P53999 127 aaKnown RBP eCLIP9.28□□□□□ -0.925e-7■□□□□ 11.2
UBR4-207ENST00000425413 SLC35B1P78383 322 aa9.28□□□□□ -0.92
UBR4-207ENST00000425413 CENPWQ5EE01 88 aa9.28□□□□□ -0.92
UBR4-207ENST00000425413 LEMD1Q68G75 181 aa9.28□□□□□ -0.92
UBR4-207ENST00000425413 TEX38Q6PEX7 206 aa9.28□□□□□ -0.92
UBR4-207ENST00000425413 MRPL41Q8IXM3 137 aaKnown RBP9.28□□□□□ -0.92
UBR4-207ENST00000425413 OR8B3Q8NGG8 313 aa9.28□□□□□ -0.92
UBR4-207ENST00000425413 OR10G8Q8NGN5 311 aa9.28□□□□□ -0.92
UBR4-207ENST00000425413 SGK494Q96LW2 274 aa9.28□□□□□ -0.92
UBR4-207ENST00000425413 OR8B2Q96RD0 313 aa9.28□□□□□ -0.92
UBR4-207ENST00000425413 DNAJC4Q9NNZ3 241 aa9.28□□□□□ -0.92
UBR4-207ENST00000425413 TRAPPC1Q9Y5R8 145 aa9.28□□□□□ -0.92
UBR4-207ENST00000425413 IGLC7A0M8Q6 106 aa9.28□□□□□ -0.92
UBR4-207ENST00000425413 TSTD3H0UI37 97 aa9.28□□□□□ -0.92
UBR4-207ENST00000425413 FRMD6-AS1P0C7T7 363 aa9.28□□□□□ -0.92
UBR4-207ENST00000425413 C8orf88P0DMB2 117 aa9.28□□□□□ -0.92
UBR4-207ENST00000425413 MGST1P10620 155 aaKnown RBP9.28□□□□□ -0.92
UBR4-207ENST00000425413 CDKN1AP38936 164 aa9.28□□□□□ -0.92
UBR4-207ENST00000425413 ERVFC1-1P60608 527 aa9.28□□□□□ -0.92
UBR4-207ENST00000425413 OR1B1Q8NGR6 318 aa9.28□□□□□ -0.92
UBR4-207ENST00000425413 RPH3ALQ9UNE2 315 aa9.28□□□□□ -0.92
UBR4-207ENST00000425413 A0A087X0M5 115 aa9.27□□□□□ -0.92
UBR4-207ENST00000425413 A0A1B0GX30 115 aa9.27□□□□□ -0.92
UBR4-207ENST00000425413 HELTA6NFD8 242 aa9.27□□□□□ -0.92
UBR4-207ENST00000425413 SRP14P37108 136 aaKnown RBP9.27□□□□□ -0.92
UBR4-207ENST00000425413 GNG4P50150 75 aa9.27□□□□□ -0.92
UBR4-207ENST00000425413 TCL1AP56279 114 aa9.27□□□□□ -0.92
UBR4-207ENST00000425413 TAS2R45P59539 299 aa9.27□□□□□ -0.92
UBR4-207ENST00000425413 C10orf113Q5VZT2 155 aa9.27□□□□□ -0.92
UBR4-207ENST00000425413 PATE2Q6UY27 113 aa9.27□□□□□ -0.92
UBR4-207ENST00000425413 ZNF596Q8TC21 504 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms