RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-206	ENST00000423161	ABHD1	Q96SE0	405 aa		13.56	□□□□□ -0.24
SREBF1-206	ENST00000423161	TMEM231	Q9H6L2	316 aa		13.56	□□□□□ -0.24
SREBF1-206	ENST00000423161		A0A0G2JRQ6	117 aa		13.55	□□□□□ -0.24
SREBF1-206	ENST00000423161	CA1	P00915	261 aa	Predicted RBP	13.55	□□□□□ -0.24
SREBF1-206	ENST00000423161	UCP1	P25874	307 aa		13.55	□□□□□ -0.24
SREBF1-206	ENST00000423161	DEFB131A	P59861	70 aa		13.55	□□□□□ -0.24
SREBF1-206	ENST00000423161	LEMD1	Q68G75	181 aa		13.55	□□□□□ -0.24
SREBF1-206	ENST00000423161	TMEM229B	Q8NBD8	167 aa		13.55	□□□□□ -0.24
SREBF1-206	ENST00000423161	OR11H2	Q8NH07	326 aa		13.55	□□□□□ -0.24
SREBF1-206	ENST00000423161	MARCH1	Q8TCQ1	289 aa		13.55	□□□□□ -0.24
SREBF1-206	ENST00000423161	C15orf40	Q8WUR7	153 aa		13.55	□□□□□ -0.24
SREBF1-206	ENST00000423161	C11orf68	Q9H3H3	251 aa	Known RBP	13.55	□□□□□ -0.24
SREBF1-206	ENST00000423161	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.55	□□□□□ -0.24
SREBF1-206	ENST00000423161	TRAV2	A0A0B4J234	112 aa		13.54	□□□□□ -0.24
SREBF1-206	ENST00000423161	RAB3D	O95716	219 aa		13.54	□□□□□ -0.24
SREBF1-206	ENST00000423161	CD74	P04233	296 aa		13.54	□□□□□ -0.24
SREBF1-206	ENST00000423161	NPPC	P23582	126 aa		13.54	□□□□□ -0.24
SREBF1-206	ENST00000423161	OPRK1	P41145	380 aa		13.54	□□□□□ -0.24
SREBF1-206	ENST00000423161	TAS2R19	P59542	299 aa		13.54	□□□□□ -0.24
SREBF1-206	ENST00000423161	FAM24B	Q8N5W8	94 aa		13.54	□□□□□ -0.24
SREBF1-206	ENST00000423161	MRPL36	Q9P0J6	103 aa	Known RBP	13.54	□□□□□ -0.24
SREBF1-206	ENST00000423161	RABAC1	Q9UI14	185 aa		13.54	□□□□□ -0.24
SREBF1-206	ENST00000423161	CLN5	O75503	358 aa		13.53	□□□□□ -0.24
SREBF1-206	ENST00000423161	SCGB2A1	O75556	95 aa		13.53	□□□□□ -0.24
SREBF1-206	ENST00000423161	B3GALNT1	O75752	331 aa		13.53	□□□□□ -0.24
SREBF1-206	ENST00000423161	STEAP1B	Q6NZ63	245 aa		13.53	□□□□□ -0.24
SREBF1-206	ENST00000423161	OR4X1	Q8NH49	305 aa		13.53	□□□□□ -0.24
SREBF1-206	ENST00000423161		A0A1W2PS18	150 aa		13.52	□□□□□ -0.25
SREBF1-206	ENST00000423161	SMIM18	P0DKX4	95 aa		13.52	□□□□□ -0.25
SREBF1-206	ENST00000423161	RPL5	P46777	297 aa	Known RBP	13.52	□□□□□ -0.25
SREBF1-206	ENST00000423161	NANOS2	P60321	138 aa	Known RBP	13.52	□□□□□ -0.25
SREBF1-206	ENST00000423161	TMEM187	Q14656	261 aa		13.52	□□□□□ -0.25
SREBF1-206	ENST00000423161	MLANA	Q16655	118 aa		13.52	□□□□□ -0.25
SREBF1-206	ENST00000423161	GPR107	Q5VW38	600 aa		13.52	□□□□□ -0.25
SREBF1-206	ENST00000423161		Q6ZRM9	215 aa		13.52	□□□□□ -0.25
SREBF1-206	ENST00000423161	STXBP6	Q8NFX7	210 aa		13.52	□□□□□ -0.25
SREBF1-206	ENST00000423161	C11orf45	Q8TAV5	145 aa		13.52	□□□□□ -0.25
SREBF1-206	ENST00000423161	TMEM230	Q96A57	120 aa		13.52	□□□□□ -0.25
SREBF1-206	ENST00000423161	METTL26	Q96S19	204 aa		13.52	□□□□□ -0.25
SREBF1-206	ENST00000423161	MFF	Q9GZY8	342 aa		13.52	□□□□□ -0.25
SREBF1-206	ENST00000423161	TMEM222	Q9H0R3	208 aa		13.52	□□□□□ -0.25
SREBF1-206	ENST00000423161	FBXL17	Q9UF56	701 aa		13.52	□□□□□ -0.25
SREBF1-206	ENST00000423161	C14orf166	Q9Y224	244 aa	Known RBP	13.52	□□□□□ -0.25
SREBF1-206	ENST00000423161	GABARAP	H6UMI1	98 aa		13.51	□□□□□ -0.25
SREBF1-206	ENST00000423161	OR5AC1	P0C628	307 aa		13.51	□□□□□ -0.25
SREBF1-206	ENST00000423161	CRYBB3	P26998	211 aa		13.51	□□□□□ -0.25
SREBF1-206	ENST00000423161	SPCS3	P61009	180 aa		13.51	□□□□□ -0.25
SREBF1-206	ENST00000423161	RBMS2	Q15434	407 aa	Known RBP	13.51	□□□□□ -0.25
SREBF1-206	ENST00000423161	BSX	Q3C1V8	233 aa		13.51	□□□□□ -0.25
SREBF1-206	ENST00000423161	FAAP20	Q6NZ36	180 aa		13.51	□□□□□ -0.25
SREBF1-206	ENST00000423161	FAM219A	Q8IW50	185 aa		13.51	□□□□□ -0.25
SREBF1-206	ENST00000423161	STH	Q8IWL8	128 aa		13.51	□□□□□ -0.25
SREBF1-206	ENST00000423161	NARS2	Q96I59	477 aa	Known RBP	13.51	□□□□□ -0.25
SREBF1-206	ENST00000423161	MIXL1	Q9H2W2	232 aa		13.51	□□□□□ -0.25
SREBF1-206	ENST00000423161	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.5	□□□□□ -0.25
SREBF1-206	ENST00000423161	DEFB4A	O15263	64 aa		13.5	□□□□□ -0.25
SREBF1-206	ENST00000423161	RGS5	O15539	181 aa		13.5	□□□□□ -0.25
SREBF1-206	ENST00000423161	CDS2	O95674	445 aa		13.5	□□□□□ -0.25
SREBF1-206	ENST00000423161	IGKV1-17	P01599	117 aa		13.5	□□□□□ -0.25
SREBF1-206	ENST00000423161	P2RY1	P47900	373 aa		13.5	□□□□□ -0.25
SREBF1-206	ENST00000423161	SSBP1	Q04837	148 aa	Known RBP	13.5	□□□□□ -0.25
SREBF1-206	ENST00000423161	TIGIT	Q495A1	244 aa		13.5	□□□□□ -0.25
SREBF1-206	ENST00000423161	RPP25L	Q8N5L8	163 aa	Known RBP	13.5	□□□□□ -0.25
SREBF1-206	ENST00000423161	LHFPL5	Q8TAF8	219 aa		13.5	□□□□□ -0.25
SREBF1-206	ENST00000423161	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.5	□□□□□ -0.25
SREBF1-206	ENST00000423161	TRAV30	A0A087WSZ9	112 aa		13.49	□□□□□ -0.25
SREBF1-206	ENST00000423161	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.49	□□□□□ -0.25
SREBF1-206	ENST00000423161		K7EQG2	157 aa		13.49	□□□□□ -0.25
SREBF1-206	ENST00000423161	IFNA4	P05014	189 aa		13.49	□□□□□ -0.25
SREBF1-206	ENST00000423161	HTR2B	P41595	481 aa		13.49	□□□□□ -0.25
SREBF1-206	ENST00000423161	MRPS10	P82664	201 aa	Known RBP	13.49	□□□□□ -0.25
SREBF1-206	ENST00000423161	MEF2D	Q14814	521 aa		13.49	□□□□□ -0.25
SREBF1-206	ENST00000423161	AARD	Q4LEZ3	155 aa		13.49	□□□□□ -0.25
SREBF1-206	ENST00000423161	LGALS9C	Q6DKI2	356 aa		13.49	□□□□□ -0.25
SREBF1-206	ENST00000423161	OR52E5	Q8NH55	327 aa		13.49	□□□□□ -0.25
SREBF1-206	ENST00000423161	GLYATL2	Q8WU03	294 aa		13.49	□□□□□ -0.25
SREBF1-206	ENST00000423161	RBPMS	Q93062	196 aa	Known RBP	13.49	□□□□□ -0.25
SREBF1-206	ENST00000423161	RTBDN	Q9BSG5	229 aa	Predicted RBP	13.49	□□□□□ -0.25
SREBF1-206	ENST00000423161	NAA60	Q9H7X0	242 aa		13.49	□□□□□ -0.25
SREBF1-206	ENST00000423161	HEYL	Q9NQ87	328 aa	Predicted RBP	13.49	□□□□□ -0.25
SREBF1-206	ENST00000423161	KMT2A	Q03164	3969 aa		13.48	□□□□□ -0.25
SREBF1-206	ENST00000423161	DISC1	C4P0D8	188 aa		13.48	□□□□□ -0.25
SREBF1-206	ENST00000423161	DEDD	O75618	318 aa		13.48	□□□□□ -0.25
SREBF1-206	ENST00000423161	ZNF688	P0C7X2	276 aa		13.48	□□□□□ -0.25
SREBF1-206	ENST00000423161	SMIM4	Q8WVI0	70 aa		13.48	□□□□□ -0.25
SREBF1-206	ENST00000423161	GRAMD2B	Q96HH9	432 aa		13.48	□□□□□ -0.25
SREBF1-206	ENST00000423161	CACNG5	Q9UF02	275 aa		13.48	□□□□□ -0.25
SREBF1-206	ENST00000423161	CTDSP2	O14595	271 aa		13.47	□□□□□ -0.25
SREBF1-206	ENST00000423161	RND2	P52198	227 aa		13.47	□□□□□ -0.25
SREBF1-206	ENST00000423161	DHODH	Q02127	395 aa		13.47	□□□□□ -0.25
SREBF1-206	ENST00000423161	SURF2	Q15527	256 aa	Predicted RBP	13.47	□□□□□ -0.25
SREBF1-206	ENST00000423161	C2orf83	Q53S99	150 aa		13.47	□□□□□ -0.25
SREBF1-206	ENST00000423161	TRPT1	Q86TN4	253 aa	Known RBP	13.47	□□□□□ -0.25
SREBF1-206	ENST00000423161	SELENOH	Q8IZQ5	122 aa	Known RBP	13.47	□□□□□ -0.25
SREBF1-206	ENST00000423161	GPR146	Q96CH1	333 aa		13.47	□□□□□ -0.25
SREBF1-206	ENST00000423161	FRAS1	Q86XX4	4008 aa		13.47	□□□□□ -0.25
SREBF1-206	ENST00000423161	KNCN	A6PVL3	124 aa		13.46	□□□□□ -0.25
SREBF1-206	ENST00000423161	CEBPZOS	A8MTT3	80 aa		13.46	□□□□□ -0.25
SREBF1-206	ENST00000423161	IGLC1	P0CG04	106 aa		13.46	□□□□□ -0.25
SREBF1-206	ENST00000423161	AKAIN1	P0CW23	69 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms