RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 ZNF688P0C7X2 276 aa12.18□□□□□ -0.46
UPF3AP3-201ENST00000420996 RPS19P39019 145 aaKnown RBP12.18□□□□□ -0.46
UPF3AP3-201ENST00000420996 P2RY1P47900 373 aa12.18□□□□□ -0.46
UPF3AP3-201ENST00000420996 NEDD8Q15843 81 aa12.18□□□□□ -0.46
UPF3AP3-201ENST00000420996 SLC35G3Q8N808 338 aa12.18□□□□□ -0.46
UPF3AP3-201ENST00000420996 CSNK1G2-AS1Q8NCQ2 148 aa12.18□□□□□ -0.46
UPF3AP3-201ENST00000420996 DCANP1Q8TF63 244 aa12.18□□□□□ -0.46
UPF3AP3-201ENST00000420996 TBC1D24Q9ULP9 559 aa12.18□□□□□ -0.46
UPF3AP3-201ENST00000420996 CLN5O75503 358 aa12.17□□□□□ -0.46
UPF3AP3-201ENST00000420996 IFNA17P01571 189 aa12.17□□□□□ -0.46
UPF3AP3-201ENST00000420996 P0C879 139 aa12.17□□□□□ -0.46
UPF3AP3-201ENST00000420996 RNASE2P10153 161 aaKnown RBP12.17□□□□□ -0.46
UPF3AP3-201ENST00000420996 TGFBR1P36897 503 aa12.17□□□□□ -0.46
UPF3AP3-201ENST00000420996 PPP5CP53041 499 aa12.17□□□□□ -0.46
UPF3AP3-201ENST00000420996 KCTD21Q4G0X4 260 aa12.17□□□□□ -0.46
UPF3AP3-201ENST00000420996 TMEM230Q96A57 120 aa12.17□□□□□ -0.46
UPF3AP3-201ENST00000420996 NARS2Q96I59 477 aaKnown RBP12.17□□□□□ -0.46
UPF3AP3-201ENST00000420996 CLEC5AQ9NY25 188 aa12.17□□□□□ -0.46
UPF3AP3-201ENST00000420996 MRPL36Q9P0J6 103 aaKnown RBP12.17□□□□□ -0.46
UPF3AP3-201ENST00000420996 DEFB131BA0A096LNP1 70 aa12.16□□□□□ -0.46
UPF3AP3-201ENST00000420996 A0A0B4J293 547 aa12.16□□□□□ -0.46
UPF3AP3-201ENST00000420996 SCGB2A1O75556 95 aa12.16□□□□□ -0.46
UPF3AP3-201ENST00000420996 IGKV1-5P01602 117 aa12.16□□□□□ -0.46
UPF3AP3-201ENST00000420996 AMBPP02760 352 aa12.16□□□□□ -0.46
UPF3AP3-201ENST00000420996 RND3P61587 244 aa12.16□□□□□ -0.46
UPF3AP3-201ENST00000420996 C12orf74Q32Q52 190 aa12.16□□□□□ -0.46
UPF3AP3-201ENST00000420996 ACTL10Q5JWF8 245 aa12.16□□□□□ -0.46
UPF3AP3-201ENST00000420996 POM121L12Q8N7R1 296 aa12.16□□□□□ -0.46
UPF3AP3-201ENST00000420996 OR4X1Q8NH49 305 aa12.16□□□□□ -0.46
UPF3AP3-201ENST00000420996 FNDC4Q9H6D8 234 aaPredicted RBP12.16□□□□□ -0.46
UPF3AP3-201ENST00000420996 SCPEP1Q9HB40 452 aa12.16□□□□□ -0.46
UPF3AP3-201ENST00000420996 RYR1P21817 5038 aa12.16□□□□□ -0.46
UPF3AP3-201ENST00000420996 SMIM31A0A1B0GVY4 71 aa12.15□□□□□ -0.46
UPF3AP3-201ENST00000420996 P0DMU3 169 aa12.15□□□□□ -0.46
UPF3AP3-201ENST00000420996 FAM231AP0DMU4 169 aa12.15□□□□□ -0.46
UPF3AP3-201ENST00000420996 FAM231CP0DMU5 169 aa12.15□□□□□ -0.46
UPF3AP3-201ENST00000420996 MED14OSP0DP75 135 aa12.15□□□□□ -0.46
UPF3AP3-201ENST00000420996 RCVRNP35243 200 aa12.15□□□□□ -0.46
UPF3AP3-201ENST00000420996 OPRK1P41145 380 aa12.15□□□□□ -0.46
UPF3AP3-201ENST00000420996 RPL5P46777 297 aaKnown RBP12.15□□□□□ -0.46
UPF3AP3-201ENST00000420996 MLANAQ16655 118 aa12.15□□□□□ -0.46
UPF3AP3-201ENST00000420996 RAB40CQ96S21 281 aa12.15□□□□□ -0.46
UPF3AP3-201ENST00000420996 PDCD10Q9BUL8 212 aa12.15□□□□□ -0.46
UPF3AP3-201ENST00000420996 CELA1Q9UNI1 258 aa12.15□□□□□ -0.46
UPF3AP3-201ENST00000420996 ATG12O94817 140 aa12.14□□□□□ -0.47
UPF3AP3-201ENST00000420996 IGKV1-17P01599 117 aa12.14□□□□□ -0.47
UPF3AP3-201ENST00000420996 ETV6P41212 452 aa12.14□□□□□ -0.47
UPF3AP3-201ENST00000420996 EIF2B2P49770 351 aaKnown RBP12.14□□□□□ -0.47
UPF3AP3-201ENST00000420996 AKR1C2P52895 323 aa12.14□□□□□ -0.47
UPF3AP3-201ENST00000420996 ZNF486Q96H40 463 aaPredicted RBP12.14□□□□□ -0.47
UPF3AP3-201ENST00000420996 ENY2Q9NPA8 101 aa12.14□□□□□ -0.47
UPF3AP3-201ENST00000420996 U3KQE9 123 aa12.14□□□□□ -0.47
UPF3AP3-201ENST00000420996 TRAV30A0A087WSZ9 112 aa12.13□□□□□ -0.47
UPF3AP3-201ENST00000420996 PRSS29PA6NIE9 313 aa12.13□□□□□ -0.47
UPF3AP3-201ENST00000420996 APOA1P02647 267 aa12.13□□□□□ -0.47
UPF3AP3-201ENST00000420996 PGAM2P15259 253 aa12.13□□□□□ -0.47
UPF3AP3-201ENST00000420996 HOXA1P49639 335 aaPredicted RBP12.13□□□□□ -0.47
UPF3AP3-201ENST00000420996 AP2S1P53680 142 aaPredicted RBP12.13□□□□□ -0.47
UPF3AP3-201ENST00000420996 DHRS2Q13268 280 aa12.13□□□□□ -0.47
UPF3AP3-201ENST00000420996 TIGITQ495A1 244 aa12.13□□□□□ -0.47
UPF3AP3-201ENST00000420996 ZNF767PQ75MW2 155 aa12.13□□□□□ -0.47
UPF3AP3-201ENST00000420996 SNX29P2Q8IUI4 249 aa12.13□□□□□ -0.47
UPF3AP3-201ENST00000420996 TP53RKQ96S44 253 aa12.13□□□□□ -0.47
UPF3AP3-201ENST00000420996 NDUFAF3Q9BU61 184 aa12.13□□□□□ -0.47
UPF3AP3-201ENST00000420996 C1QTNF4Q9BXJ3 329 aa12.13□□□□□ -0.47
UPF3AP3-201ENST00000420996 HELTA6NFD8 242 aa12.12□□□□□ -0.47
UPF3AP3-201ENST00000420996 M0QYG6 137 aa12.12□□□□□ -0.47
UPF3AP3-201ENST00000420996 RTL8CO15255 209 aa12.12□□□□□ -0.47
UPF3AP3-201ENST00000420996 PI3P19957 117 aa12.12□□□□□ -0.47
UPF3AP3-201ENST00000420996 NPY1RP25929 384 aa12.12□□□□□ -0.47
UPF3AP3-201ENST00000420996 PIGPP57054 158 aa12.12□□□□□ -0.47
UPF3AP3-201ENST00000420996 NUTF2P61970 127 aaKnown RBP12.12□□□□□ -0.47
UPF3AP3-201ENST00000420996 BSXQ3C1V8 233 aa12.12□□□□□ -0.47
UPF3AP3-201ENST00000420996 PSMG4Q5JS54 123 aa12.12□□□□□ -0.47
UPF3AP3-201ENST00000420996 C16orf54Q6UWD8 224 aa12.12□□□□□ -0.47
UPF3AP3-201ENST00000420996 COMMD3Q9UBI1 195 aa12.12□□□□□ -0.47
UPF3AP3-201ENST00000420996 MUC4Q99102 2169 aa12.12□□□□□ -0.47
UPF3AP3-201ENST00000420996 C3orf85A0A1B0GTC6 90 aa12.11□□□□□ -0.47
UPF3AP3-201ENST00000420996 LSM3P62310 102 aaKnown RBP12.11□□□□□ -0.47
UPF3AP3-201ENST00000420996 LHFPL1Q86WI0 220 aa12.11□□□□□ -0.47
UPF3AP3-201ENST00000420996 GLMPQ8WWB7 406 aa12.11□□□□□ -0.47
UPF3AP3-201ENST00000420996 PKHD1P08F94 4074 aa12.1□□□□□ -0.47
UPF3AP3-201ENST00000420996 FAT2Q9NYQ8 4349 aa12.1□□□□□ -0.47
UPF3AP3-201ENST00000420996 RPS10-NUDT3A0A1W2PQS6 291 aa12.1□□□□□ -0.47
UPF3AP3-201ENST00000420996 M0R2N4 97 aa12.1□□□□□ -0.47
UPF3AP3-201ENST00000420996 HNRNPCP07910 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
UPF3AP3-201ENST00000420996 SNRPD3P62318 126 aaKnown RBP12.1□□□□□ -0.47
UPF3AP3-201ENST00000420996 LGALS9BQ3B8N2 356 aa12.1□□□□□ -0.47
UPF3AP3-201ENST00000420996 OR1S2Q8NGQ3 325 aa12.1□□□□□ -0.47
UPF3AP3-201ENST00000420996 Q8WTZ3 238 aa12.1□□□□□ -0.47
UPF3AP3-201ENST00000420996 YIPF6Q96EC8 236 aa12.1□□□□□ -0.47
UPF3AP3-201ENST00000420996 RRNAD1Q96FB5 475 aaKnown RBP12.1□□□□□ -0.47
UPF3AP3-201ENST00000420996 SEPSECSQ9HD40 501 aaKnown RBP12.1□□□□□ -0.47
UPF3AP3-201ENST00000420996 XCL2Q9UBD3 114 aa12.1□□□□□ -0.47
UPF3AP3-201ENST00000420996 A0A0G2JRQ6 117 aa12.09□□□□□ -0.47
UPF3AP3-201ENST00000420996 H3BMM0 161 aa12.09□□□□□ -0.47
UPF3AP3-201ENST00000420996 IGLC1P0CG04 106 aa12.09□□□□□ -0.47
UPF3AP3-201ENST00000420996 HTR2BP41595 481 aa12.09□□□□□ -0.47
UPF3AP3-201ENST00000420996 SPCS3P61009 180 aa12.09□□□□□ -0.47
UPF3AP3-201ENST00000420996 YPEL3P61236 119 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms